BLASTX nr result

ID: Coptis25_contig00007392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007392
         (1958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304521.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-15
ref|XP_002275586.2| PREDICTED: uncharacterized protein LOC100256...    85   6e-14
emb|CAN73361.1| hypothetical protein VITISV_006165 [Vitis vinifera]    85   6e-14
ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243...    81   1e-12
emb|CAN82727.1| hypothetical protein VITISV_040324 [Vitis vinifera]    81   1e-12

>ref|XP_002304521.1| predicted protein [Populus trichocarpa] gi|222841953|gb|EEE79500.1|
            predicted protein [Populus trichocarpa]
          Length = 822

 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 55/121 (45%), Positives = 71/121 (58%), Gaps = 13/121 (10%)
 Frame = -1

Query: 1052 SAQVARSPPAVPVQLQAPGS--SFPMIVDGHRGVNTTH----------VARSNVLNELPS 909
            +AQ AR PP+VPVQ+Q  G+  S+    DG R   T            V+ +  L +L S
Sbjct: 677  AAQRARQPPSVPVQIQTSGAGASYLTSADGIRAPATEQRGNAGGALPAVSGTEGLVDLAS 736

Query: 908  GQNWRPAGRMRGALSGQAYSAALNQYMVQPTQSVQATSPPPHTALA-FSVSQQLQILISN 732
             QNWRP GRMRG+LSG+AYSAAL ++MVQPTQ  Q   PPP+   +  S+   LQ L + 
Sbjct: 737  EQNWRPTGRMRGSLSGRAYSAALKEFMVQPTQQTQTPRPPPNLPPSQSSMPPHLQFLFAR 796

Query: 731  N 729
            N
Sbjct: 797  N 797


>ref|XP_002275586.2| PREDICTED: uncharacterized protein LOC100256919 [Vitis vinifera]
          Length = 881

 Score = 85.1 bits (209), Expect = 6e-14
 Identities = 47/103 (45%), Positives = 67/103 (65%), Gaps = 14/103 (13%)
 Frame = -1

Query: 1055 RSAQVARSPPAVPVQLQAP--GSSFPMIVDGHRGVNTTHVARSNVLNE------------ 918
            ++ QV+RSPP+VPVQL+    G++F + +   + + T    R N+L              
Sbjct: 724  QTVQVSRSPPSVPVQLRPARTGTAFSVGMVAEQ-LRTAGEQRRNILGTAWSTPRPDASAA 782

Query: 917  LPSGQNWRPAGRMRGALSGQAYSAALNQYMVQPTQSVQATSPP 789
            LP+ +NWRP+GRMRG+L+G+AYSAALNQ+M+QPTQ  QA  PP
Sbjct: 783  LPTDENWRPSGRMRGSLTGEAYSAALNQFMLQPTQPTQAPLPP 825


>emb|CAN73361.1| hypothetical protein VITISV_006165 [Vitis vinifera]
          Length = 845

 Score = 85.1 bits (209), Expect = 6e-14
 Identities = 47/103 (45%), Positives = 67/103 (65%), Gaps = 14/103 (13%)
 Frame = -1

Query: 1055 RSAQVARSPPAVPVQLQAP--GSSFPMIVDGHRGVNTTHVARSNVLNE------------ 918
            ++ QV+RSPP+VPVQL+    G++F + +   + + T    R N+L              
Sbjct: 685  QTVQVSRSPPSVPVQLRPARTGTAFSVGMVAEQ-LRTAGEQRRNILGTAWSTPRPDASAA 743

Query: 917  LPSGQNWRPAGRMRGALSGQAYSAALNQYMVQPTQSVQATSPP 789
            LP+ +NWRP+GRMRG+L+G+AYSAALNQ+M+QPTQ  QA  PP
Sbjct: 744  LPTDENWRPSGRMRGSLTGEAYSAALNQFMLQPTQPTQAPLPP 786


>ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243215 [Vitis vinifera]
          Length = 920

 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 49/119 (41%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
 Frame = -1

Query: 1055 RSAQVARSPPAVPVQLQAPGSSFPMIVDGHRGVNTTH----------VARSNVLNELPSG 906
            R+AQ+ R P  V  Q    GS+FP+  +G R                V+R   L +L S 
Sbjct: 767  RAAQMTRMPLPVQNQTSRTGSAFPVNANGGRSTAGEQRGNIEGMVQAVSRPESLVDLASE 826

Query: 905  QNWRPAGRMRGALSGQAYSAALNQYMVQPTQSVQATSPP-PHTALAFSVSQQLQILISN 732
            QNWRP G MRG+L G+AY++ALNQ ++QPTQ  Q+T PP P T+        LQ L++N
Sbjct: 827  QNWRPTGLMRGSLVGRAYNSALNQLVIQPTQPTQSTRPPTPITSPPPGFPPHLQALLTN 885


>emb|CAN82727.1| hypothetical protein VITISV_040324 [Vitis vinifera]
          Length = 901

 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 49/119 (41%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
 Frame = -1

Query: 1055 RSAQVARSPPAVPVQLQAPGSSFPMIVDGHRGVNTTH----------VARSNVLNELPSG 906
            R+AQ+ R P  V  Q    GS+FP+  +G R                V+R   L +L S 
Sbjct: 748  RAAQMTRMPLPVQNQTSRTGSAFPVNANGGRSTAGEQRGNIEGMVQAVSRPESLVDLASE 807

Query: 905  QNWRPAGRMRGALSGQAYSAALNQYMVQPTQSVQATSPP-PHTALAFSVSQQLQILISN 732
            QNWRP G MRG+L G+AY++ALNQ ++QPTQ  Q+T PP P T+        LQ L++N
Sbjct: 808  QNWRPTGLMRGSLVGRAYNSALNQLVIQPTQPTQSTRPPTPITSPPPGFPPHLQALLTN 866


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