BLASTX nr result

ID: Coptis25_contig00007386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007386
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264016.1| PREDICTED: trihelix transcription factor GT-...   221   2e-55
ref|XP_002308224.1| predicted protein [Populus trichocarpa] gi|2...   207   3e-51
emb|CBI22801.3| unnamed protein product [Vitis vinifera]              205   1e-50
ref|XP_002322985.1| predicted protein [Populus trichocarpa] gi|2...   202   9e-50
ref|XP_003530286.1| PREDICTED: trihelix transcription factor GT-...   199   6e-49

>ref|XP_002264016.1| PREDICTED: trihelix transcription factor GT-3a [Vitis vinifera]
          Length = 255

 Score =  221 bits (562), Expect = 2e-55
 Identities = 112/188 (59%), Positives = 132/188 (70%)
 Frame = -3

Query: 723 HHLSIPIDAGGGDRVPQWSLQETREFLSIRAELDQTFMETKRNKLLWEVISNKMKEKGYY 544
           HH+S+ ID G  DR PQWS+QET+EFL IRAELD+TFMETKRNKLLWEVI+NKMKEKGY 
Sbjct: 4   HHISVHIDTG--DRFPQWSIQETKEFLMIRAELDRTFMETKRNKLLWEVIANKMKEKGYN 61

Query: 543 RSAEQCKCKWKNLVTRYKGSETMEVDTVRQQFPFYNELQSIFAARMQRMLWLEAEGGASG 364
           RSA+QCKCKWKNLVTRYKG ETME + +RQQFPFYNELQ+IF ARMQRMLW+EAEGGA  
Sbjct: 62  RSADQCKCKWKNLVTRYKGCETMEPEAMRQQFPFYNELQAIFTARMQRMLWIEAEGGA-- 119

Query: 363 SMKKRSGRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQEILEEFMKQ 184
             KK+  +L                                       +L+E+LE+FMKQ
Sbjct: 120 --KKKGVQLSSEDEDENEESEGEKGSSKKKKKGKTSVNVGGSSSGGSFNLKEVLEDFMKQ 177

Query: 183 QMQLEIQW 160
           Q+Q+E+QW
Sbjct: 178 QVQMEVQW 185


>ref|XP_002308224.1| predicted protein [Populus trichocarpa] gi|222854200|gb|EEE91747.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  207 bits (526), Expect = 3e-51
 Identities = 106/188 (56%), Positives = 126/188 (67%)
 Frame = -3

Query: 723 HHLSIPIDAGGGDRVPQWSLQETREFLSIRAELDQTFMETKRNKLLWEVISNKMKEKGYY 544
           H++S+ +D    DR PQWS+QET+EFL IRAELD TFME KRNK+LWEVIS  MKEKGY 
Sbjct: 19  HNISVNVDTS--DRFPQWSIQETKEFLMIRAELDPTFMEKKRNKVLWEVISKNMKEKGYN 76

Query: 543 RSAEQCKCKWKNLVTRYKGSETMEVDTVRQQFPFYNELQSIFAARMQRMLWLEAEGGASG 364
           RSAEQCKCKWKNLVTRYKG ET+E +++R QFPFYNELQ+IF +RMQRMLW++AEG ASG
Sbjct: 77  RSAEQCKCKWKNLVTRYKGYETIEPESMRHQFPFYNELQAIFTSRMQRMLWVDAEGAASG 136

Query: 363 SMKKRSGRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQEILEEFMKQ 184
           S KK +                                          SL+E LE+FMKQ
Sbjct: 137 SKKKAAQLSSDEEEDNEEISEGEKGSSRKRIKKGKAVGGASCSTGNSNSLRETLEDFMKQ 196

Query: 183 QMQLEIQW 160
           QMQ+E+QW
Sbjct: 197 QMQMEMQW 204


>emb|CBI22801.3| unnamed protein product [Vitis vinifera]
          Length = 172

 Score =  205 bits (521), Expect = 1e-50
 Identities = 96/118 (81%), Positives = 107/118 (90%)
 Frame = -3

Query: 723 HHLSIPIDAGGGDRVPQWSLQETREFLSIRAELDQTFMETKRNKLLWEVISNKMKEKGYY 544
           HH+S+ ID G  DR PQWS+QET+EFL IRAELD+TFMETKRNKLLWEVI+NKMKEKGY 
Sbjct: 4   HHISVHIDTG--DRFPQWSIQETKEFLMIRAELDRTFMETKRNKLLWEVIANKMKEKGYN 61

Query: 543 RSAEQCKCKWKNLVTRYKGSETMEVDTVRQQFPFYNELQSIFAARMQRMLWLEAEGGA 370
           RSA+QCKCKWKNLVTRYKG ETME + +RQQFPFYNELQ+IF ARMQRMLW+EAEGGA
Sbjct: 62  RSADQCKCKWKNLVTRYKGCETMEPEAMRQQFPFYNELQAIFTARMQRMLWIEAEGGA 119


>ref|XP_002322985.1| predicted protein [Populus trichocarpa] gi|222867615|gb|EEF04746.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  202 bits (513), Expect = 9e-50
 Identities = 105/188 (55%), Positives = 128/188 (68%)
 Frame = -3

Query: 723 HHLSIPIDAGGGDRVPQWSLQETREFLSIRAELDQTFMETKRNKLLWEVISNKMKEKGYY 544
           HH+S+ ++A   D+ PQWS+QET+EFL IRAELD TFME KRNK+LWEVISNKMKEKGY 
Sbjct: 25  HHISVNVEAS--DKFPQWSIQETKEFLMIRAELDPTFMEKKRNKVLWEVISNKMKEKGYN 82

Query: 543 RSAEQCKCKWKNLVTRYKGSETMEVDTVRQQFPFYNELQSIFAARMQRMLWLEAEGGASG 364
           RSAEQCKCKWKNL TRYKG ET+E + +RQQFPFYNELQ+IF +RMQRML  EAEG A+G
Sbjct: 83  RSAEQCKCKWKNLFTRYKGCETIEPEAMRQQFPFYNELQAIFTSRMQRMLRAEAEGAATG 142

Query: 363 SMKKRSGRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQEILEEFMKQ 184
            +KK++ +L                                       SL+E LE+F KQ
Sbjct: 143 -LKKKAVKLSSDDEDKNEEIIEGEKGGSRKKIKKGKAIGGTSSSGNSISLKESLEDFTKQ 201

Query: 183 QMQLEIQW 160
           Q+Q+E+QW
Sbjct: 202 QIQMEMQW 209


>ref|XP_003530286.1| PREDICTED: trihelix transcription factor GT-3a-like [Glycine max]
          Length = 285

 Score =  199 bits (506), Expect = 6e-49
 Identities = 104/189 (55%), Positives = 121/189 (64%), Gaps = 1/189 (0%)
 Frame = -3

Query: 723 HHLSIPIDAGGGDRVPQWSLQETREFLSIRAELDQTFMETKRNKLLWEVISNKMKEKGYY 544
           HH     +    DR PQWS+QET+EFL IRAELDQTFM+TKRNK LWEVIS +MKEKG++
Sbjct: 27  HHNITTSNVDATDRFPQWSIQETKEFLMIRAELDQTFMDTKRNKQLWEVISTRMKEKGFH 86

Query: 543 RSAEQCKCKWKNLVTRYKGSETMEVDTVRQQFPFYNELQSIFAARMQRMLWLEAEGGASG 364
           +SAEQCKCKWKNLVTRYKG ETME +  RQQFPFYNELQ+IFAARMQRMLW EAEGG++ 
Sbjct: 87  KSAEQCKCKWKNLVTRYKGCETMEPEATRQQFPFYNELQAIFAARMQRMLWAEAEGGSNK 146

Query: 363 SMKKRSGR-LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQEILEEFMK 187
                S                                           SL+EI++EFM+
Sbjct: 147 KKVHLSSEDEEEGNEETSEGDHKGNITSKKKKKGKMVIGGGGSGNNNLESLKEIMDEFMR 206

Query: 186 QQMQLEIQW 160
           QQMQ+E QW
Sbjct: 207 QQMQMEAQW 215


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