BLASTX nr result
ID: Coptis25_contig00007382
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00007382
(719 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280306.2| PREDICTED: filament-like plant protein 4-lik... 47 3e-16
ref|XP_002301986.1| predicted protein [Populus trichocarpa] gi|2... 44 7e-15
emb|CBI19835.3| unnamed protein product [Vitis vinifera] 47 3e-14
ref|XP_003523562.1| PREDICTED: filament-like plant protein 4-lik... 44 4e-14
ref|XP_003523561.1| PREDICTED: filament-like plant protein 4-lik... 42 3e-13
>ref|XP_002280306.2| PREDICTED: filament-like plant protein 4-like [Vitis vinifera]
Length = 1040
Score = 47.4 bits (111), Expect(3) = 3e-16
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +3
Query: 90 NSELQASRNMCTKTMSKRRSLEAQLEFVDQQIKEPPQ 200
NSELQASRN+C KT SK ++LEAQL+ +QQ K PP+
Sbjct: 384 NSELQASRNICAKTASKLQNLEAQLQMNNQQ-KSPPK 419
Score = 44.7 bits (104), Expect(3) = 3e-16
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = +2
Query: 377 EHMNWLELMDDFLEMERLARSAEPN*ATFVSDSPSDKKTENEDQCSFISIRFSPC*WLFL 556
E+ N LELMDDFLEME+LA + + F S ++K++E D +R
Sbjct: 472 ENANHLELMDDFLEMEKLACLSNNSNGAF---SVNNKRSE-ADLLPLTKLR--------- 518
Query: 557 PRISMIFRSEAKDAD----MRRIQCVMHDMQDAYFQFQV 661
RISM+F S ++D+D + I+ V+ D D Q V
Sbjct: 519 SRISMVFESVSEDSDTGKILEEIKRVLQDTHDTLHQHSV 557
Score = 38.9 bits (89), Expect(3) = 3e-16
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 238 SPLSSMSMSEDGRDEEGSCIDSWATTLVS 324
+P S SMSEDG D+ SC +SWAT LVS
Sbjct: 436 NPPSMTSMSEDGNDDAVSCAESWATGLVS 464
>ref|XP_002301986.1| predicted protein [Populus trichocarpa] gi|222843712|gb|EEE81259.1|
predicted protein [Populus trichocarpa]
Length = 1082
Score = 43.9 bits (102), Expect(3) = 7e-15
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +3
Query: 90 NSELQASRNMCTKTMSKRRSLEAQLEFVDQQIKEP 194
NSELQASRN+C KT SK +SLEAQ + + Q P
Sbjct: 378 NSELQASRNLCAKTASKLQSLEAQFQINNHQKSSP 412
Score = 41.6 bits (96), Expect(3) = 7e-15
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1
Query: 238 SPLSSMSMSEDGRDEEGSCIDSWATTLVSD 327
+P S S+SEDG D+ SC DSWATT VSD
Sbjct: 430 NPPSLTSVSEDGNDDTQSCADSWATTSVSD 459
Score = 40.4 bits (93), Expect(3) = 7e-15
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +2
Query: 347 EEH*QTCQS*EHMNWLELMDDFLEMERLARSAEPN*ATFVSDSPSDK--KTENEDQCSFI 520
+ H + E+ LELMDDFLEME+LA + AT +S SP++K +T N D + +
Sbjct: 466 DNHIEKSNKAENAKHLELMDDFLEMEKLA-CLNADSATTISSSPNNKASETANTDALAEV 524
Query: 521 SIR 529
S++
Sbjct: 525 SLQ 527
>emb|CBI19835.3| unnamed protein product [Vitis vinifera]
Length = 993
Score = 47.4 bits (111), Expect(3) = 3e-14
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +3
Query: 90 NSELQASRNMCTKTMSKRRSLEAQLEFVDQQIKEPPQ 200
NSELQASRN+C KT SK ++LEAQL+ +QQ K PP+
Sbjct: 384 NSELQASRNICAKTASKLQNLEAQLQMNNQQ-KSPPK 419
Score = 38.9 bits (89), Expect(3) = 3e-14
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 238 SPLSSMSMSEDGRDEEGSCIDSWATTLVS 324
+P S SMSEDG D+ SC +SWAT LVS
Sbjct: 436 NPPSMTSMSEDGNDDAVSCAESWATGLVS 464
Score = 37.7 bits (86), Expect(3) = 3e-14
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = +2
Query: 377 EHMNWLELMDDFLEMERLARSAEPN*ATFVSDSPSDKKTENEDQCSFISIRFSPC*WLFL 556
E+ N LELMDDFLEME+LA +S++ + ++++ +R
Sbjct: 472 ENANHLELMDDFLEMEKLA---------CLSNNSNGAFSKHDLDSLANQLR--------- 513
Query: 557 PRISMIFRSEAKDAD----MRRIQCVMHDMQDAYFQ 652
RISM+F S ++D+D + I+ V+ D D Q
Sbjct: 514 SRISMVFESVSEDSDTGKILEEIKRVLQDTHDTLHQ 549
>ref|XP_003523562.1| PREDICTED: filament-like plant protein 4-like isoform 2 [Glycine
max]
Length = 1021
Score = 43.5 bits (101), Expect(3) = 4e-14
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Frame = +2
Query: 377 EHMNWLELMDDFLEMERLARSAEPN*ATFVSDSPSDKKTENEDQCSFISIRFSPC*WLFL 556
E N LELMDDFLE+E+LAR + +DS D N D S +S L L
Sbjct: 463 EVTNKLELMDDFLEVEKLARLS--------NDSNVDATVSNTDFQSDLS-------GLLL 507
Query: 557 ----PRISMIFRSEAKDADMRRI-QCVMHDMQDAY 646
RI ++F S AKDAD+ +I + + H ++D++
Sbjct: 508 TELRSRILLVFESLAKDADIGKIVEDIKHVLEDSH 542
Score = 42.4 bits (98), Expect(3) = 4e-14
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 90 NSELQASRNMCTKTMSKRRSLEAQLEFVDQQIKEPPQ 200
NSELQASR+MC KT+SK +SLEAQ + Q+K P+
Sbjct: 365 NSELQASRSMCAKTLSKLQSLEAQSQ-TSNQLKLSPK 400
Score = 37.4 bits (85), Expect(3) = 4e-14
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 247 SSMSMSEDGRDEEGSCIDSWATTLVS 324
S +SMSEDG D+ SC +SW+T +VS
Sbjct: 420 SLVSMSEDGNDDAASCAESWSTAIVS 445
>ref|XP_003523561.1| PREDICTED: filament-like plant protein 4-like isoform 1 [Glycine
max]
Length = 1038
Score = 42.4 bits (98), Expect(3) = 3e-13
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 90 NSELQASRNMCTKTMSKRRSLEAQLEFVDQQIKEPPQ 200
NSELQASR+MC KT+SK +SLEAQ + Q+K P+
Sbjct: 379 NSELQASRSMCAKTLSKLQSLEAQSQ-TSNQLKLSPK 414
Score = 40.8 bits (94), Expect(3) = 3e-13
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +2
Query: 377 EHMNWLELMDDFLEMERLAR-SAEPN*ATFVSDSPSDKKTENEDQCSFISIRFSPC*WLF 553
E N LELMDDFLE+E+LAR + PN VS P + + S + +
Sbjct: 477 EVTNKLELMDDFLEVEKLARLNPLPN---QVSSDPLMSAPDFQSDLSGLLLT------EL 527
Query: 554 LPRISMIFRSEAKDADMRRI-QCVMHDMQDAY 646
RI ++F S AKDAD+ +I + + H ++D++
Sbjct: 528 RSRILLVFESLAKDADIGKIVEDIKHVLEDSH 559
Score = 37.4 bits (85), Expect(3) = 3e-13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 247 SSMSMSEDGRDEEGSCIDSWATTLVS 324
S +SMSEDG D+ SC +SW+T +VS
Sbjct: 434 SLVSMSEDGNDDAASCAESWSTAIVS 459