BLASTX nr result

ID: Coptis25_contig00007378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007378
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU18534.1| verticillium wilt resistance-like protein [Gossyp...   149   3e-34
gb|AAQ82053.1| verticillium wilt disease resistance protein prec...   144   1e-32
gb|AAQ18798.1| disease resistance protein SlVe2 precursor [Solan...   141   1e-31
gb|ACR33109.1| verticillium wilt disease resistance protein [Sol...   139   5e-31
gb|ACR33107.1| verticillium wilt disease resistance protein [Sol...   139   5e-31

>gb|ADU18534.1| verticillium wilt resistance-like protein [Gossypium barbadense]
          Length = 1077

 Score =  149 bits (377), Expect = 3e-34
 Identities = 84/187 (44%), Positives = 111/187 (59%), Gaps = 14/187 (7%)
 Frame = -3

Query: 519 MRLLLISWLVMSS----FLSILSCTLVYGQCLEDQKALLLKWKQN---------ITFSNL 379
           MR+LL+SWL+ SS    FL I +  LV GQC  DQK LLL              I    L
Sbjct: 1   MRILLLSWLLFSSYFAIFLGISNLVLVSGQCRNDQKQLLLDLNLTSSSDLFIYPIPLGKL 60

Query: 378 TSWDLNTDCCSSWDGIKCDKDGHVISIDLSNKSIRSGVENTSSLSEXXXXXXXXXXXXXX 199
             W+   +CCS WDG+ CD  GHVI +DLSN++I S ++ +SSL                
Sbjct: 61  MKWNQAMECCS-WDGVSCDGGGHVIGLDLSNRAISSSIDGSSSLFRLQHLQRLNLASNQF 119

Query: 198 XSTIPSGLDRLVNLTHLNLSNSGFAGQVPIEISRMKRLVSLDLST-LFAGSNPLKLEKPD 22
            +  P+G D+L NL++LNLSN+GF GQ+P +I R+ RL++LDLST  F    PLKLEKP+
Sbjct: 120 MTAFPAGFDKLENLSYLNLSNAGFTGQIPAKIPRLTRLITLDLSTDPFLSGEPLKLEKPN 179

Query: 21  LKTLVKN 1
           L+ LV+N
Sbjct: 180 LEMLVQN 186


>gb|AAQ82053.1| verticillium wilt disease resistance protein precursor [Solanum
           torvum]
          Length = 1138

 Score =  144 bits (363), Expect = 1e-32
 Identities = 79/182 (43%), Positives = 109/182 (59%), Gaps = 9/182 (4%)
 Frame = -3

Query: 519 MRLLLISWLVMSSFLSILS---CTLVYGQCLEDQKALLLKWKQNITFSN-----LTSWDL 364
           MR L   WL +  F  ILS     LV  QCL+ QK+LLLK    + + +     L  W+ 
Sbjct: 1   MRFLHFLWLFLIPFFQILSGIEIFLVSSQCLDHQKSLLLKLNGTLQYDSSLSTKLARWNQ 60

Query: 363 NTDCCSSWDGIKCDKDGHVISIDLSNKSIRSGVENTSSLSEXXXXXXXXXXXXXXXSTIP 184
           NT  C +WDG+ CD  GHVI+++L N++I SG+EN+S+L                   IP
Sbjct: 61  NTSECCNWDGVTCDLSGHVIALELDNETISSGIENSSALFSLQYLEKLNLAYNRFSVGIP 120

Query: 183 SGLDRLVNLTHLNLSNSGFAGQVPIEISRMKRLVSLDLSTLFAGS-NPLKLEKPDLKTLV 7
            G+  L NL +LNLSN+GF GQ+P+ +SR+ RLV+LDLSTLF  + +PLKLE P+L   +
Sbjct: 121 VGISNLTNLKYLNLSNAGFLGQIPMMLSRLTRLVTLDLSTLFPDAIHPLKLENPNLTHFI 180

Query: 6   KN 1
           +N
Sbjct: 181 EN 182


>gb|AAQ18798.1| disease resistance protein SlVe2 precursor [Solanum
           lycopersicoides] gi|33439500|gb|AAQ18799.1| disease
           resistance protein SlVe2 precursor [Solanum
           lycopersicoides]
          Length = 1138

 Score =  141 bits (355), Expect = 1e-31
 Identities = 80/182 (43%), Positives = 108/182 (59%), Gaps = 9/182 (4%)
 Frame = -3

Query: 519 MRLLLISWLVMSSFLSIL---SCTLVYGQCLEDQKALLLKWKQNI----TFSN-LTSWDL 364
           MR L   W+ +  FL IL      LV  QCL+DQK+LLL+ K +     T SN L  W+ 
Sbjct: 1   MRFLHFLWIFLIPFLQILLGNEILLVSSQCLDDQKSLLLQLKGSFQYDSTLSNKLERWNH 60

Query: 363 NTDCCSSWDGIKCDKDGHVISIDLSNKSIRSGVENTSSLSEXXXXXXXXXXXXXXXSTIP 184
           NT  C +W+G+ CD  GHVI+++L ++ I SG+EN S+L                   IP
Sbjct: 61  NTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLESLNLAYNKFKVGIP 120

Query: 183 SGLDRLVNLTHLNLSNSGFAGQVPIEISRMKRLVSLDLSTLFAG-SNPLKLEKPDLKTLV 7
            G+  L NL +LNLSN+GF GQ+P+ +SR+ RLV+LDLSTLF     PLKLE P+L   +
Sbjct: 121 VGIGNLTNLKYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFDQPLKLENPNLSHFI 180

Query: 6   KN 1
           +N
Sbjct: 181 EN 182


>gb|ACR33109.1| verticillium wilt disease resistance protein [Solanum lycopersicum]
          Length = 1139

 Score =  139 bits (350), Expect = 5e-31
 Identities = 81/183 (44%), Positives = 110/183 (60%), Gaps = 10/183 (5%)
 Frame = -3

Query: 519 MRLLLISWLV-MSSFLSIL---SCTLVYGQCLEDQKALLLKWKQNI----TFSN-LTSWD 367
           MR L   W+  +  FL IL      LV  QCL+DQK+LLL+ K +     T SN L  W+
Sbjct: 1   MRFLHFLWIFFIIPFLQILLGNEILLVSSQCLDDQKSLLLQLKGSFQYDSTLSNKLARWN 60

Query: 366 LNTDCCSSWDGIKCDKDGHVISIDLSNKSIRSGVENTSSLSEXXXXXXXXXXXXXXXSTI 187
            NT  C +W+G+ CD  GHVI+++L ++ I SG+EN S+L                   I
Sbjct: 61  HNTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLERLNLAYNKFNVGI 120

Query: 186 PSGLDRLVNLTHLNLSNSGFAGQVPIEISRMKRLVSLDLSTLFAG-SNPLKLEKPDLKTL 10
           P G+  L NLT+LNLSN+GF GQ+P+ +SR+ RLV+LDLSTLF   + PLKLE P+L   
Sbjct: 121 PVGIGNLTNLTYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFAQPLKLENPNLSHF 180

Query: 9   VKN 1
           ++N
Sbjct: 181 IEN 183


>gb|ACR33107.1| verticillium wilt disease resistance protein [Solanum lycopersicum]
          Length = 1139

 Score =  139 bits (350), Expect = 5e-31
 Identities = 81/183 (44%), Positives = 110/183 (60%), Gaps = 10/183 (5%)
 Frame = -3

Query: 519 MRLLLISWLV-MSSFLSIL---SCTLVYGQCLEDQKALLLKWKQNI----TFSN-LTSWD 367
           MR L   W+  +  FL IL      LV  QCL+DQK+LLL+ K +     T SN L  W+
Sbjct: 1   MRFLHFLWIFFIIPFLQILLGNEILLVSSQCLDDQKSLLLQLKGSFQYDSTLSNKLARWN 60

Query: 366 LNTDCCSSWDGIKCDKDGHVISIDLSNKSIRSGVENTSSLSEXXXXXXXXXXXXXXXSTI 187
            NT  C +W+G+ CD  GHVI+++L ++ I SG+EN S+L                   I
Sbjct: 61  HNTSECCNWNGVTCDLSGHVIALELDDEKISSGIENASALFSLQYLERLNLAYNKFNVGI 120

Query: 186 PSGLDRLVNLTHLNLSNSGFAGQVPIEISRMKRLVSLDLSTLFAG-SNPLKLEKPDLKTL 10
           P G+  L NLT+LNLSN+GF GQ+P+ +SR+ RLV+LDLSTLF   + PLKLE P+L   
Sbjct: 121 PVGIGNLTNLTYLNLSNAGFVGQIPMMLSRLTRLVTLDLSTLFPDFAQPLKLENPNLSHF 180

Query: 9   VKN 1
           ++N
Sbjct: 181 IEN 183


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