BLASTX nr result

ID: Coptis25_contig00007375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007375
         (1375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303774.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-41
ref|XP_002514883.1| conserved hypothetical protein [Ricinus comm...   174   6e-41
ref|XP_002273734.1| PREDICTED: uncharacterized protein LOC100254...   172   2e-40
ref|XP_002299324.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-40
ref|XP_002873598.1| hypothetical protein ARALYDRAFT_488125 [Arab...   156   1e-35

>ref|XP_002303774.1| predicted protein [Populus trichocarpa] gi|222841206|gb|EEE78753.1|
            predicted protein [Populus trichocarpa]
          Length = 270

 Score =  176 bits (446), Expect = 1e-41
 Identities = 108/235 (45%), Positives = 145/235 (61%), Gaps = 11/235 (4%)
 Frame = -1

Query: 1129 SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKIT---NPFSFMEE--KKNCKRP---N 974
            SV+K LP  IL LAS+LSLED+EVLAY+I+RS+K T   NP SF+++  KK+ K+P   N
Sbjct: 41   SVLKLLPAAILALASVLSLEDREVLAYMITRSLKTTITNNPSSFLQDSKKKSSKKPQNNN 100

Query: 973  TSTVKKHKSPIFECGCFECYTSYWFRWDSSVNRELIHQVIEAFEDHLTNTERSPSKRTRG 794
             S    H++PIF+C CF+CY SYWFRWDSS NRELIHQVIE+FE+HLT+ E S  K  RG
Sbjct: 101  NSQTSNHRAPIFDCDCFDCYRSYWFRWDSSPNRELIHQVIESFEEHLTSGEMS-RKSNRG 159

Query: 793  KKRDK---KFQQPKIVVNSVVDEIVPQVLELETFVVTTAPENEVFFPVLESDGCEEKLPE 623
            K+RDK   +  +  ++      EI+P VLE      T+A E+     + E +  EE +  
Sbjct: 160  KRRDKTGHRAGEKPVLDVPGQPEILP-VLETSN---TSAHESPPTGSITEREEMEEAVKL 215

Query: 622  PEIVAGNXXXXXXXXXXXXXVLGGGNNHKGLVRKVMLDVIGLFNSRMLSVWSTNV 458
             + V+                +   + HKGL RKV+ DV+GL NSR+ S+ S NV
Sbjct: 216  YDEVSEEVVAAETEVEAAAHGVAVCSRHKGLARKVLPDVLGLLNSRLWSLLSPNV 270


>ref|XP_002514883.1| conserved hypothetical protein [Ricinus communis]
            gi|223545934|gb|EEF47437.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 269

 Score =  174 bits (440), Expect = 6e-41
 Identities = 113/243 (46%), Positives = 153/243 (62%), Gaps = 19/243 (7%)
 Frame = -1

Query: 1129 SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKIT-NPF----SFME--EKKNCKRPNT 971
            SV+K LP TILTLAS+LSL+D+EVLAY+I+RS+K T NP     S ++  +KK+ K  + 
Sbjct: 38   SVLKLLPATILTLASVLSLQDREVLAYMITRSLKTTTNPTPKQASLLQGSKKKSTKNKSP 97

Query: 970  STVKKHKSPIFECGCFECYTSYWFRWDSSVNRELIHQVIEAFEDHLTNTERSPSKRTRGK 791
            +T   HKSP F+C CF+CYTSYWFRWDSS NRELIHQVIEAFE+HL+N E    K +RGK
Sbjct: 98   NT---HKSPSFDCDCFDCYTSYWFRWDSSPNRELIHQVIEAFEEHLSNGELF-KKTSRGK 153

Query: 790  KRDKKFQQPKIVVNSVVDEI-VPQVLELETFV--------VTTAPENEVFFPVLESDGCE 638
            +RDK  +  ++   SV+D +  P++ E E  V           +P ++V  PV+      
Sbjct: 154  RRDKTGR--RVGDKSVIDVLGRPEMQEPEATVNESSLVGGAVVSPNDDV-SPVV----ML 206

Query: 637  EKLPEPEIVAGNXXXXXXXXXXXXXVLGGG---NNHKGLVRKVMLDVIGLFNSRMLSVWS 467
            E+  + E V G+             V+      NNHKGL RKV+ DV+GLFNSR+ ++W+
Sbjct: 207  ERAADGEEVKGSEESPAEAETEEMAVVARSPPPNNHKGLARKVLPDVLGLFNSRLWNLWN 266

Query: 466  TNV 458
             NV
Sbjct: 267  PNV 269


>ref|XP_002273734.1| PREDICTED: uncharacterized protein LOC100254092 [Vitis vinifera]
          Length = 267

 Score =  172 bits (436), Expect = 2e-40
 Identities = 104/239 (43%), Positives = 135/239 (56%), Gaps = 15/239 (6%)
 Frame = -1

Query: 1129 SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKIT---NPFSFMEE--KKNCKRPNTST 965
            SV+K LP  IL LAS+LS ED+EVLAY+I+RS+K T   NP SF ++  KK+ K+P  + 
Sbjct: 32   SVLKLLPAAILVLASVLSAEDREVLAYMITRSIKTTTTTNPCSFSQDSKKKSKKQPPAAA 91

Query: 964  V--------KKHKSPIFECGCFECYTSYWFRWDSSVNRELIHQVIEAFEDHLTNTERSPS 809
                       HK P+F+CGCFECYT YWFRWDSS NRELIHQ IEAFEDHL++ E+   
Sbjct: 92   GGGGGGGGGSAHKPPVFDCGCFECYTCYWFRWDSSPNRELIHQAIEAFEDHLSSGEKPKR 151

Query: 808  KRTRGKKRDKKFQQPKIVVNSVVDEIVPQVLELETFVVTTAPENEVFFPVLESDGCEEKL 629
               RGKK+++  ++     + +  ++   V E E   V    +  V       DGCEE  
Sbjct: 152  IGGRGKKKERVGRRIADKPDDISCQLEMPVAEEEAPEVPNTDDASVAPAPTARDGCEEAK 211

Query: 628  PEPE--IVAGNXXXXXXXXXXXXXVLGGGNNHKGLVRKVMLDVIGLFNSRMLSVWSTNV 458
             E     V G                   +NHKGL RKV+ DV+GL NSR+  +WS NV
Sbjct: 212  AEDNNGDVPGEESAAETSEIVRDT---AASNHKGLARKVLPDVLGLLNSRLWGLWSPNV 267


>ref|XP_002299324.1| predicted protein [Populus trichocarpa] gi|222846582|gb|EEE84129.1|
            predicted protein [Populus trichocarpa]
          Length = 277

 Score =  171 bits (433), Expect = 4e-40
 Identities = 109/251 (43%), Positives = 145/251 (57%), Gaps = 27/251 (10%)
 Frame = -1

Query: 1129 SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKIT---NPFSFMEE--KKNCKRP---N 974
            SV+K LP  IL LAS+LSLED+EVLAY+I+RS+K T   NP   +++  KK+ K+P   N
Sbjct: 30   SVLKLLPAAILALASVLSLEDREVLAYMITRSLKTTTTNNPSPSLQDSKKKSSKKPQNNN 89

Query: 973  TSTVKKHKSPIFECGCFECYTSYWFRWDSSVNRELIHQVIEAFEDHLTNTERSPSKRTRG 794
             S    H +PIF+C CF+CY SYWFRWDSS NRELIHQVIEAFE+HLT+ E S  K TRG
Sbjct: 90   NSQRSNHIAPIFDCDCFDCYISYWFRWDSSPNRELIHQVIEAFEEHLTSDEMS-RKHTRG 148

Query: 793  KKRDKKFQQPKIVVNSVVD-----EIVPQVLELETFVVTTAPENEVFFPVLESDGCEEKL 629
            K+RDK  +  ++   SV+D     E++P +    T    ++    V   V  + GC +  
Sbjct: 149  KRRDKAGR--RVGEKSVLDVPGQPEMIPVLETSNTTSHESSSSCSVADVVNVNVGCPDNG 206

Query: 628  PEPEIVAGN--------------XXXXXXXXXXXXXVLGGGNNHKGLVRKVMLDVIGLFN 491
              PE VA                              +   ++HKGL RKV+ DV+GL N
Sbjct: 207  LSPEKVAEREEMEECVKLYDEVPEEVVVAETAAAAHGVAVCSHHKGLARKVLPDVLGLLN 266

Query: 490  SRMLSVWSTNV 458
            SR+ ++WS NV
Sbjct: 267  SRLWNLWSPNV 277


>ref|XP_002873598.1| hypothetical protein ARALYDRAFT_488125 [Arabidopsis lyrata subsp.
            lyrata] gi|297319435|gb|EFH49857.1| hypothetical protein
            ARALYDRAFT_488125 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  156 bits (394), Expect = 1e-35
 Identities = 100/240 (41%), Positives = 134/240 (55%), Gaps = 17/240 (7%)
 Frame = -1

Query: 1129 SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKITNPF-SFMEEKKNCKRPNTSTVKKH 953
            SV+K LP TIL L S+LS E++EVLAYLI+R   I++   S  +  K  K+ N  + K H
Sbjct: 34   SVLKLLPATILVLVSVLSAEEREVLAYLITRGTTISDRGNSSSKNNKTKKKSNNKSAKNH 93

Query: 952  KSPIFECGCFECYTSYWFRWDSSVNRELIHQVIEAFED-HLTNTER---SPSKRTRGKKR 785
            K P+F+C CF+CYT+YWFRWDSS NRELIH++IEAFE+ HLT+ E+   S +K  RGKK+
Sbjct: 94   KPPVFDCECFDCYTNYWFRWDSSPNRELIHEIIEAFENHHLTSGEQNSASRNKSKRGKKK 153

Query: 784  DK---------KFQQPKIVVNSVVDEIVPQVLELETFVVTTAPENEVFFPVLESDG-CEE 635
            +K            +P I V+   D+    V+E  T   T +  + V  P   S+    E
Sbjct: 154  EKPGRRVTDSDSNNKPGIRVSDDDDKDSKPVVEPMT-ETTVSESSHVSSPDRLSEAEVAE 212

Query: 634  KLPEPEIVAGNXXXXXXXXXXXXXVLGGGN--NHKGLVRKVMLDVIGLFNSRMLSVWSTN 461
              PE EIV                     +   HKGL RKV+ DV+GLFNS    +W+ N
Sbjct: 213  GEPEDEIVVEEEEEEEEESTVVVFAAAASSVTGHKGLARKVLPDVLGLFNSNFWRLWNPN 272


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