BLASTX nr result
ID: Coptis25_contig00007374
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007374 (1498 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm... 127 8e-27 ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arab... 123 1e-25 ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2... 123 1e-25 ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g... 122 2e-25 ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata sub... 121 4e-25 >ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis] gi|223543465|gb|EEF44996.1| conserved hypothetical protein [Ricinus communis] Length = 401 Score = 127 bits (319), Expect = 8e-27 Identities = 122/433 (28%), Positives = 190/433 (43%), Gaps = 18/433 (4%) Frame = +2 Query: 17 MEKAESKEMKLREERSVDMFSKLPLEVTNNILLRLPFKSVAKGRCVSKKWCNILTDSKFL 196 M KE R S + F KLP E+ +IL R P S+ + + VS+ W + + Sbjct: 1 MASNSGKEETSRNPGS-ESFEKLPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLLA 59 Query: 197 KMQLTQLSNIESDVFFYYRNSNNETALTYIEETDENTFSKNPVKPFKVHDYDYVKNTFGW 376 M L + + + F+ ++ L +E + K PF + V + F Sbjct: 60 NMHLNRAAEQNLCLLFFSDWPRSKLELVQVEHPEPRKL-KTLKTPF-----ESVLSEF-- 111 Query: 377 LIKIWGSCNGFVCLSRINLFNPSLPENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSA 556 ++ GSCNG +CL + F+ ++P Y++NP T EC ELP +E S S Sbjct: 112 --EVVGSCNGLICL--YDYFS----DDPLYIYNPFTIECRELPRVEA--------SPHSV 155 Query: 557 VCS--SGFGFDESKQEFKVV-LVMFTQCESDTPAVDSEVKIYTLGSPSWRKKTCNAPGLF 727 +C GFGF +E+KV+ +V + Q +D E + T +P+WR G Sbjct: 156 ICRVVFGFGFHPKMEEYKVIKIVYYKQGNNDFSGGAPEAFVLTANTPTWR--NIGKIGYD 213 Query: 728 RSCENVSVYFHGCLHWL--ILDENSRRYGPLIVSFDLGVEEFGTVPTPGSKMFKHSFQYY 901 + + LHWL L +Y IVSFDL E+F VP PG Y Sbjct: 214 LNGPTSEALVNEKLHWLTFCLVHEEVKYRE-IVSFDLETEQFQDVPRPGCGGLDQI--NY 270 Query: 902 SIGVLEGNLASVEFSPETYIHVWVMKRYKVKKSWVRQFSIEH--------NSV-----CR 1042 + L G L+++ E +W+MK Y VK SW ++ + + N+V + Sbjct: 271 HLVTLRGCLSAIVSCNEGSNEIWMMKIYNVKASWRKEMIVRNYVPQGLRLNTVPPARRRK 330 Query: 1043 QGLRCRYIELVKLTKKGELLFLCNCQYLVSYNITGKWCRFLRVEGVKKVKDGSKLLAHPL 1222 G + R ++ K GELL L C+ +VSYN + L +G+ + LA Sbjct: 331 NGYQGRRFRVLCDLKNGELLLLYGCRCIVSYNPETGEFKELNFQGLP-----LEFLAFVH 385 Query: 1223 VGSLISLKSAYGL 1261 GSLIS+ + +G+ Sbjct: 386 SGSLISVNTVFGM 398 >ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arabidopsis lyrata subsp. lyrata] gi|297328298|gb|EFH58717.1| hypothetical protein ARALYDRAFT_896735 [Arabidopsis lyrata subsp. lyrata] Length = 414 Score = 123 bits (309), Expect = 1e-25 Identities = 127/440 (28%), Positives = 194/440 (44%), Gaps = 20/440 (4%) Frame = +2 Query: 14 AMEKAESKEMKLREERSVDMFSK----LPLEVTNNILLRLPFKSVAKGRCVSKKWCNILT 181 A + + +E EER+ D S LP E+ ILLRLP KS+ + RCVSK C++ Sbjct: 3 AANREKQRENDDGEERTNDEASPGLLFLPHEIITEILLRLPTKSIGQCRCVSKLLCSLSP 62 Query: 182 DSKFLKMQLTQLSNIESDVFFY--------YRNSNNETALTYIEETDEN-TFSKNPVKPF 334 F+K L + ++ + V Y + E + + + N +P Sbjct: 63 SPGFVKSHLERSNHRKMIVSTYNLYSVDVDWIGDGCEGSRESVAAVELNYPLKDDPSMMD 122 Query: 335 KVHDYDYVKNTFGWLIKIWGSCNGFVCLSRINLFNPSLPENPFYVFNPITGECIELPHLE 514 ++ + Y ++ W++ I GS NG VCLS S + P ++FNP TG+ LP Sbjct: 123 QIGRHSYRRS---WVV-IVGSSNGLVCLS----LGASYKKVPVFLFNPTTGDSKRLPEAP 174 Query: 515 VLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVLVMFTQCESDTPAVDSEVKIYTLGSPSW 694 V E S GFGFD+ ++KVV ++ T S+ +D+ V Y+L + SW Sbjct: 175 V-----DTPVESFNFRSYGFGFDDHTHDYKVVKLVATSV-SNQHILDASV--YSLKANSW 226 Query: 695 RK------KTCNAPGLFRSCENVSVYFHGCLHWLILDENSRRYGPLIVSFDLGVEEFGTV 856 R+ K NA F +C V+F+G +HW++ R +I+ FDL EEF + Sbjct: 227 RRICILNYKGSNA---FHTC---GVHFNGAIHWVLTRHEDHR---VILVFDLTTEEFREM 277 Query: 857 PTPG-SKMFKHSFQYYSIGVLEGNLASVEFSPETYIHVWVMKRYKVKKSWVRQFSIEHNS 1033 P P ++ H + +G L G L V + +WVM Y KSW R Sbjct: 278 PFPDEAEDCSHKRGEFMVGCLNGRLCVVNHCNGQHDDIWVMNEYGEAKSWSRMRMSLSYW 337 Query: 1034 VCRQGLRCRYIELVKLTKKGELLFLCNCQYLVSYNITGKWCRFLRVEGVKKVKDGSKLLA 1213 V R + + V L G+ +V YN R + + G K G A Sbjct: 338 VMRPQCSTKNDDEVLLDVDGD---------MVLYNFKTDASRRMSIRGFKV---GVGFEA 385 Query: 1214 HPLVGSLISLKSAYGLSKRS 1273 V SLI+ S+YG++ R+ Sbjct: 386 DTYVESLIA-PSSYGIASRA 404 >ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1| predicted protein [Populus trichocarpa] Length = 408 Score = 123 bits (309), Expect = 1e-25 Identities = 113/419 (26%), Positives = 187/419 (44%), Gaps = 20/419 (4%) Frame = +2 Query: 92 EVTNNILLRLPFKSVAKGRCVSKKWCNILTDSKFLKMQLTQLSNIESDVFFYYRNSNNET 271 E+T +IL RLP KS+ + RCVSK WC + F+ L + S + + R++ N Sbjct: 6 EITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDATNLC 65 Query: 272 ALTYIEETDENTFSKNPVK--PFKVHDYDYVKNTFGWLIKIWGSCNGFVCLSR----INL 433 + + D F+ +K P K D ++ GSCNG + L I L Sbjct: 66 TV----DLDSPDFTSIELKNNPLKSDD---------CATEVMGSCNGLLALLNSDFSIAL 112 Query: 434 FNPSLPENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVL 613 +NPS E +P +ELP+ D ++ K S S GFG D +++KVV Sbjct: 113 YNPSTREKKMIPVSP-----LELPN----DLDDSKVS--SLFNFYGFGHDPINEDYKVVR 161 Query: 614 VMFTQCESDTPAVDSEVKIYTLGSPSWRK--------KTCNAPGLFRSC-ENVSVYFHGC 766 + +S EVK+Y+L S SW++ + P C V+ + Sbjct: 162 FIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSA 221 Query: 767 LHW--LILDENSRRYGPLIVSFDLGVEEFGTVPTPGSKMFKHSFQYYSIGVLEGNLASVE 940 +HW ++ + LIV+FDLG EEF +P P +H ++GVL G L Sbjct: 222 VHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQPDYSSNEHEM---NVGVLGGCLCVFC 278 Query: 941 FSPETYIHVWVMKRYKVKKSWVRQFSIEHNSVCRQGLRCRYIELVKL--TKKGELLFL-C 1111 + +WVMK Y VK+SW ++ + + ++ ++ L +K G+ + L Sbjct: 279 NKNCKQVEIWVMKEYGVKESWTHLCTV----IAQLQVKAFWLHARPLAYSKGGDKILLEL 334 Query: 1112 NCQYLVSYNITGKWCRFLRVEGVKKVKDGSKLLAHPLVGSLISLKSAYGLSKRSTSDKE 1288 + ++ V Y++ + + +R+ G + +A VGSL++L G + TS K+ Sbjct: 335 DNRFFVWYDLRRRKSKIIRIRGAPPI-----FIAEICVGSLVTLN---GGGEGQTSGKD 385 >ref|XP_002308787.1| f-box family protein [Populus trichocarpa] gi|222854763|gb|EEE92310.1| f-box family protein [Populus trichocarpa] Length = 396 Score = 122 bits (307), Expect = 2e-25 Identities = 92/323 (28%), Positives = 152/323 (47%), Gaps = 3/323 (0%) Frame = +2 Query: 77 SKLPLEVTNNILLRLPFKSVAKGRCVSKKWCNILTDSKFLKMQLTQLSNIESDVFFYYRN 256 S LPLE+ IL RLP K + R VSK WC ++ F+K+ L + S+++ R Sbjct: 2 SGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRT 61 Query: 257 SNNETALTYIEETDENTFSKNPVKPFKVHDYDYVKNTFGWLIKIWGSCNGFVCLSRINLF 436 +++ + + E N K ++ + G IK+ GS NG +C+S + Sbjct: 62 TSHVHYMDF-----EQNLVLNDCVTLKELNHPLMCYNHG--IKVLGSVNGLLCISNV--- 111 Query: 437 NPSLPENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCS---SGFGFDESKQEFKV 607 + V+NP T + +P L + E+K+ + CS GFG+D + ++K+ Sbjct: 112 -----VDDIAVWNPSTRKHRVVPFLPI----ELKRYFGTKSCSVYVFGFGYDSVRDDYKL 162 Query: 608 VLVMFTQCESDTPAVDSEVKIYTLGSPSWRKKTCNAPGLFRSCENVSVYFHGCLHWLILD 787 V + + +SEVK+Y+L SWR + + P V+ +G LHW++ + Sbjct: 163 VRIA-QFGGGGKRSFESEVKVYSLRKQSWR-RIGDMPYCVHYPGANGVFANGALHWVVGE 220 Query: 788 ENSRRYGPLIVSFDLGVEEFGTVPTPGSKMFKHSFQYYSIGVLEGNLASVEFSPETYIHV 967 ++V+ DLGVE++ V P +K Y +GVL G L + + V Sbjct: 221 NPESNVANIVVALDLGVEDYREVLQP---EYKDKNFYIDLGVLRGCLCFLANFLGERVDV 277 Query: 968 WVMKRYKVKKSWVRQFSIEHNSV 1036 W+MK Y VK+SW + FS+ V Sbjct: 278 WMMKEYGVKESWTKLFSVAQYEV 300 >ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] gi|297328297|gb|EFH58716.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] Length = 427 Score = 121 bits (304), Expect = 4e-25 Identities = 130/457 (28%), Positives = 205/457 (44%), Gaps = 41/457 (8%) Frame = +2 Query: 14 AMEKAESKEMKLREERSVDMFSK---LPLEVTNNILLRLPFKSVAKGRCVSKKWCNILTD 184 A+ KA KE + ++ + + LP E+ ILLRLP KS+ + RCVSK + ++ +D Sbjct: 10 AIMKATKKERRREDDDGEEASPESLVLPPEIITEILLRLPAKSIGRFRCVSKLFYSLSSD 69 Query: 185 SKFLKMQLTQL-----------------SNIESDVFFYYRNSNNETA---LTYIEETDEN 304 F K L + N+ S F R+ + A L Y + D + Sbjct: 70 PGFAKNHLDLILRNDAVKSLHRKLIVSSHNLYSLDFNSIRDGIRDLAAVELNYPLKDDPS 129 Query: 305 TFSKNPVKPFKVHDYD------------YVKNTFGWLIKIWGSCNGFVCLSRINLFNPSL 448 FS+ + H YD Y +N W ++I GS NG VC+S Sbjct: 130 IFSEMIRNYVREHLYDDRRVMLKLNAKSYRRN---W-VEIVGSSNGLVCISP-------- 177 Query: 449 PENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVLVMFTQ 628 E ++NP TG+ LP E L + ++ + + GFGFD+ ++KVV ++ T Sbjct: 178 GEGAVILYNPTTGDSKRLP--ETLRPKSVEYG-RDNFQTYGFGFDDLTDDYKVVKLVATS 234 Query: 629 CESDTPAVDSEVKIYTLGSPSWRKKTCNA-----PGLFRSCENVSVYFHGCLHWLILDEN 793 + + +Y+L + SWR + CN G + S V+F+G +HW+ + + Sbjct: 235 DDI------LDASVYSLKADSWR-RICNLNYEHNDGFYTS----GVHFNGAIHWVFAEIS 283 Query: 794 SRRYGPLIVSFDLGVEEFGTVPTP-GSKMFKHSFQYYSIGVLEGNLASVEFSPETYIHVW 970 + ++V+FD+ EEF +P P ++ H F + +G L G L V E + +W Sbjct: 284 HGQ--RVVVAFDIQTEEFREMPLPVEAEDCHHRFSNFVVGSLNGRLCVVNSCYEVHDDIW 341 Query: 971 VMKRYKVKKSWVRQFSIEHNSVCRQGLRCRYIELVKLTKKGELLFLCNCQYLVSYNITGK 1150 VM Y KSW R R L R ++ + TKK E + L +V YN Sbjct: 342 VMSEYGEVKSWSR---------IRINLLYRSMKPLCSTKKDEEVLLELDGDMVLYNFETN 392 Query: 1151 WCRFLRVEGVKKVKDGSKLLAHPLVGSLISLKSAYGL 1261 L + GV K+ DG + A+ V SLIS ++YG+ Sbjct: 393 ASSNLGIRGV-KLSDGFE--ANTYVESLIS-PNSYGI 425