BLASTX nr result

ID: Coptis25_contig00007374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007374
         (1498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...   127   8e-27
ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arab...   123   1e-25
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-25
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   122   2e-25
ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata sub...   121   4e-25

>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
            gi|223543465|gb|EEF44996.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 401

 Score =  127 bits (319), Expect = 8e-27
 Identities = 122/433 (28%), Positives = 190/433 (43%), Gaps = 18/433 (4%)
 Frame = +2

Query: 17   MEKAESKEMKLREERSVDMFSKLPLEVTNNILLRLPFKSVAKGRCVSKKWCNILTDSKFL 196
            M     KE   R   S + F KLP E+  +IL R P  S+ + + VS+ W   + +    
Sbjct: 1    MASNSGKEETSRNPGS-ESFEKLPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLLA 59

Query: 197  KMQLTQLSNIESDVFFYYRNSNNETALTYIEETDENTFSKNPVKPFKVHDYDYVKNTFGW 376
             M L + +     + F+     ++  L  +E  +     K    PF     + V + F  
Sbjct: 60   NMHLNRAAEQNLCLLFFSDWPRSKLELVQVEHPEPRKL-KTLKTPF-----ESVLSEF-- 111

Query: 377  LIKIWGSCNGFVCLSRINLFNPSLPENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSA 556
              ++ GSCNG +CL   + F+    ++P Y++NP T EC ELP +E         S  S 
Sbjct: 112  --EVVGSCNGLICL--YDYFS----DDPLYIYNPFTIECRELPRVEA--------SPHSV 155

Query: 557  VCS--SGFGFDESKQEFKVV-LVMFTQCESDTPAVDSEVKIYTLGSPSWRKKTCNAPGLF 727
            +C    GFGF    +E+KV+ +V + Q  +D      E  + T  +P+WR       G  
Sbjct: 156  ICRVVFGFGFHPKMEEYKVIKIVYYKQGNNDFSGGAPEAFVLTANTPTWR--NIGKIGYD 213

Query: 728  RSCENVSVYFHGCLHWL--ILDENSRRYGPLIVSFDLGVEEFGTVPTPGSKMFKHSFQYY 901
             +        +  LHWL   L     +Y   IVSFDL  E+F  VP PG          Y
Sbjct: 214  LNGPTSEALVNEKLHWLTFCLVHEEVKYRE-IVSFDLETEQFQDVPRPGCGGLDQI--NY 270

Query: 902  SIGVLEGNLASVEFSPETYIHVWVMKRYKVKKSWVRQFSIEH--------NSV-----CR 1042
             +  L G L+++    E    +W+MK Y VK SW ++  + +        N+V      +
Sbjct: 271  HLVTLRGCLSAIVSCNEGSNEIWMMKIYNVKASWRKEMIVRNYVPQGLRLNTVPPARRRK 330

Query: 1043 QGLRCRYIELVKLTKKGELLFLCNCQYLVSYNITGKWCRFLRVEGVKKVKDGSKLLAHPL 1222
             G + R   ++   K GELL L  C+ +VSYN      + L  +G+       + LA   
Sbjct: 331  NGYQGRRFRVLCDLKNGELLLLYGCRCIVSYNPETGEFKELNFQGLP-----LEFLAFVH 385

Query: 1223 VGSLISLKSAYGL 1261
             GSLIS+ + +G+
Sbjct: 386  SGSLISVNTVFGM 398


>ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arabidopsis lyrata subsp.
            lyrata] gi|297328298|gb|EFH58717.1| hypothetical protein
            ARALYDRAFT_896735 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  123 bits (309), Expect = 1e-25
 Identities = 127/440 (28%), Positives = 194/440 (44%), Gaps = 20/440 (4%)
 Frame = +2

Query: 14   AMEKAESKEMKLREERSVDMFSK----LPLEVTNNILLRLPFKSVAKGRCVSKKWCNILT 181
            A  + + +E    EER+ D  S     LP E+   ILLRLP KS+ + RCVSK  C++  
Sbjct: 3    AANREKQRENDDGEERTNDEASPGLLFLPHEIITEILLRLPTKSIGQCRCVSKLLCSLSP 62

Query: 182  DSKFLKMQLTQLSNIESDVFFY--------YRNSNNETALTYIEETDEN-TFSKNPVKPF 334
               F+K  L + ++ +  V  Y        +     E +   +   + N     +P    
Sbjct: 63   SPGFVKSHLERSNHRKMIVSTYNLYSVDVDWIGDGCEGSRESVAAVELNYPLKDDPSMMD 122

Query: 335  KVHDYDYVKNTFGWLIKIWGSCNGFVCLSRINLFNPSLPENPFYVFNPITGECIELPHLE 514
            ++  + Y ++   W++ I GS NG VCLS       S  + P ++FNP TG+   LP   
Sbjct: 123  QIGRHSYRRS---WVV-IVGSSNGLVCLS----LGASYKKVPVFLFNPTTGDSKRLPEAP 174

Query: 515  VLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVLVMFTQCESDTPAVDSEVKIYTLGSPSW 694
            V         E     S GFGFD+   ++KVV ++ T   S+   +D+ V  Y+L + SW
Sbjct: 175  V-----DTPVESFNFRSYGFGFDDHTHDYKVVKLVATSV-SNQHILDASV--YSLKANSW 226

Query: 695  RK------KTCNAPGLFRSCENVSVYFHGCLHWLILDENSRRYGPLIVSFDLGVEEFGTV 856
            R+      K  NA   F +C    V+F+G +HW++      R   +I+ FDL  EEF  +
Sbjct: 227  RRICILNYKGSNA---FHTC---GVHFNGAIHWVLTRHEDHR---VILVFDLTTEEFREM 277

Query: 857  PTPG-SKMFKHSFQYYSIGVLEGNLASVEFSPETYIHVWVMKRYKVKKSWVRQFSIEHNS 1033
            P P  ++   H    + +G L G L  V      +  +WVM  Y   KSW R        
Sbjct: 278  PFPDEAEDCSHKRGEFMVGCLNGRLCVVNHCNGQHDDIWVMNEYGEAKSWSRMRMSLSYW 337

Query: 1034 VCRQGLRCRYIELVKLTKKGELLFLCNCQYLVSYNITGKWCRFLRVEGVKKVKDGSKLLA 1213
            V R     +  + V L   G+         +V YN      R + + G K    G    A
Sbjct: 338  VMRPQCSTKNDDEVLLDVDGD---------MVLYNFKTDASRRMSIRGFKV---GVGFEA 385

Query: 1214 HPLVGSLISLKSAYGLSKRS 1273
               V SLI+  S+YG++ R+
Sbjct: 386  DTYVESLIA-PSSYGIASRA 404


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  123 bits (309), Expect = 1e-25
 Identities = 113/419 (26%), Positives = 187/419 (44%), Gaps = 20/419 (4%)
 Frame = +2

Query: 92   EVTNNILLRLPFKSVAKGRCVSKKWCNILTDSKFLKMQLTQLSNIESDVFFYYRNSNNET 271
            E+T +IL RLP KS+ + RCVSK WC  +    F+   L + S   + +    R++ N  
Sbjct: 6    EITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDATNLC 65

Query: 272  ALTYIEETDENTFSKNPVK--PFKVHDYDYVKNTFGWLIKIWGSCNGFVCLSR----INL 433
             +    + D   F+   +K  P K  D            ++ GSCNG + L      I L
Sbjct: 66   TV----DLDSPDFTSIELKNNPLKSDD---------CATEVMGSCNGLLALLNSDFSIAL 112

Query: 434  FNPSLPENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVL 613
            +NPS  E      +P     +ELP+    D ++ K S  S     GFG D   +++KVV 
Sbjct: 113  YNPSTREKKMIPVSP-----LELPN----DLDDSKVS--SLFNFYGFGHDPINEDYKVVR 161

Query: 614  VMFTQCESDTPAVDSEVKIYTLGSPSWRK--------KTCNAPGLFRSC-ENVSVYFHGC 766
             +    +S       EVK+Y+L S SW++        +    P     C     V+ +  
Sbjct: 162  FIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSA 221

Query: 767  LHW--LILDENSRRYGPLIVSFDLGVEEFGTVPTPGSKMFKHSFQYYSIGVLEGNLASVE 940
            +HW   ++ +       LIV+FDLG EEF  +P P     +H     ++GVL G L    
Sbjct: 222  VHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQPDYSSNEHEM---NVGVLGGCLCVFC 278

Query: 941  FSPETYIHVWVMKRYKVKKSWVRQFSIEHNSVCRQGLRCRYIELVKL--TKKGELLFL-C 1111
                  + +WVMK Y VK+SW    ++    + +  ++  ++    L  +K G+ + L  
Sbjct: 279  NKNCKQVEIWVMKEYGVKESWTHLCTV----IAQLQVKAFWLHARPLAYSKGGDKILLEL 334

Query: 1112 NCQYLVSYNITGKWCRFLRVEGVKKVKDGSKLLAHPLVGSLISLKSAYGLSKRSTSDKE 1288
            + ++ V Y++  +  + +R+ G   +      +A   VGSL++L    G  +  TS K+
Sbjct: 335  DNRFFVWYDLRRRKSKIIRIRGAPPI-----FIAEICVGSLVTLN---GGGEGQTSGKD 385


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
            gi|222854763|gb|EEE92310.1| f-box family protein [Populus
            trichocarpa]
          Length = 396

 Score =  122 bits (307), Expect = 2e-25
 Identities = 92/323 (28%), Positives = 152/323 (47%), Gaps = 3/323 (0%)
 Frame = +2

Query: 77   SKLPLEVTNNILLRLPFKSVAKGRCVSKKWCNILTDSKFLKMQLTQLSNIESDVFFYYRN 256
            S LPLE+   IL RLP K +   R VSK WC ++    F+K+ L    +  S+++   R 
Sbjct: 2    SGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRT 61

Query: 257  SNNETALTYIEETDENTFSKNPVKPFKVHDYDYVKNTFGWLIKIWGSCNGFVCLSRINLF 436
            +++   + +     E     N     K  ++  +    G  IK+ GS NG +C+S +   
Sbjct: 62   TSHVHYMDF-----EQNLVLNDCVTLKELNHPLMCYNHG--IKVLGSVNGLLCISNV--- 111

Query: 437  NPSLPENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCS---SGFGFDESKQEFKV 607
                  +   V+NP T +   +P L +    E+K+   +  CS    GFG+D  + ++K+
Sbjct: 112  -----VDDIAVWNPSTRKHRVVPFLPI----ELKRYFGTKSCSVYVFGFGYDSVRDDYKL 162

Query: 608  VLVMFTQCESDTPAVDSEVKIYTLGSPSWRKKTCNAPGLFRSCENVSVYFHGCLHWLILD 787
            V +          + +SEVK+Y+L   SWR +  + P          V+ +G LHW++ +
Sbjct: 163  VRIA-QFGGGGKRSFESEVKVYSLRKQSWR-RIGDMPYCVHYPGANGVFANGALHWVVGE 220

Query: 788  ENSRRYGPLIVSFDLGVEEFGTVPTPGSKMFKHSFQYYSIGVLEGNLASVEFSPETYIHV 967
                    ++V+ DLGVE++  V  P    +K    Y  +GVL G L  +       + V
Sbjct: 221  NPESNVANIVVALDLGVEDYREVLQP---EYKDKNFYIDLGVLRGCLCFLANFLGERVDV 277

Query: 968  WVMKRYKVKKSWVRQFSIEHNSV 1036
            W+MK Y VK+SW + FS+    V
Sbjct: 278  WMMKEYGVKESWTKLFSVAQYEV 300


>ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328297|gb|EFH58716.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 427

 Score =  121 bits (304), Expect = 4e-25
 Identities = 130/457 (28%), Positives = 205/457 (44%), Gaps = 41/457 (8%)
 Frame = +2

Query: 14   AMEKAESKEMKLREERSVDMFSK---LPLEVTNNILLRLPFKSVAKGRCVSKKWCNILTD 184
            A+ KA  KE +  ++   +   +   LP E+   ILLRLP KS+ + RCVSK + ++ +D
Sbjct: 10   AIMKATKKERRREDDDGEEASPESLVLPPEIITEILLRLPAKSIGRFRCVSKLFYSLSSD 69

Query: 185  SKFLKMQLTQL-----------------SNIESDVFFYYRNSNNETA---LTYIEETDEN 304
              F K  L  +                  N+ S  F   R+   + A   L Y  + D +
Sbjct: 70   PGFAKNHLDLILRNDAVKSLHRKLIVSSHNLYSLDFNSIRDGIRDLAAVELNYPLKDDPS 129

Query: 305  TFSKNPVKPFKVHDYD------------YVKNTFGWLIKIWGSCNGFVCLSRINLFNPSL 448
             FS+      + H YD            Y +N   W ++I GS NG VC+S         
Sbjct: 130  IFSEMIRNYVREHLYDDRRVMLKLNAKSYRRN---W-VEIVGSSNGLVCISP-------- 177

Query: 449  PENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVLVMFTQ 628
             E    ++NP TG+   LP  E L  + ++   +    + GFGFD+   ++KVV ++ T 
Sbjct: 178  GEGAVILYNPTTGDSKRLP--ETLRPKSVEYG-RDNFQTYGFGFDDLTDDYKVVKLVATS 234

Query: 629  CESDTPAVDSEVKIYTLGSPSWRKKTCNA-----PGLFRSCENVSVYFHGCLHWLILDEN 793
             +        +  +Y+L + SWR + CN       G + S     V+F+G +HW+  + +
Sbjct: 235  DDI------LDASVYSLKADSWR-RICNLNYEHNDGFYTS----GVHFNGAIHWVFAEIS 283

Query: 794  SRRYGPLIVSFDLGVEEFGTVPTP-GSKMFKHSFQYYSIGVLEGNLASVEFSPETYIHVW 970
              +   ++V+FD+  EEF  +P P  ++   H F  + +G L G L  V    E +  +W
Sbjct: 284  HGQ--RVVVAFDIQTEEFREMPLPVEAEDCHHRFSNFVVGSLNGRLCVVNSCYEVHDDIW 341

Query: 971  VMKRYKVKKSWVRQFSIEHNSVCRQGLRCRYIELVKLTKKGELLFLCNCQYLVSYNITGK 1150
            VM  Y   KSW R          R  L  R ++ +  TKK E + L     +V YN    
Sbjct: 342  VMSEYGEVKSWSR---------IRINLLYRSMKPLCSTKKDEEVLLELDGDMVLYNFETN 392

Query: 1151 WCRFLRVEGVKKVKDGSKLLAHPLVGSLISLKSAYGL 1261
                L + GV K+ DG +  A+  V SLIS  ++YG+
Sbjct: 393  ASSNLGIRGV-KLSDGFE--ANTYVESLIS-PNSYGI 425


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