BLASTX nr result
ID: Coptis25_contig00007374
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00007374
(1498 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm... 127 8e-27
ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arab... 123 1e-25
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2... 123 1e-25
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g... 122 2e-25
ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata sub... 121 4e-25
>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
gi|223543465|gb|EEF44996.1| conserved hypothetical
protein [Ricinus communis]
Length = 401
Score = 127 bits (319), Expect = 8e-27
Identities = 122/433 (28%), Positives = 190/433 (43%), Gaps = 18/433 (4%)
Frame = +2
Query: 17 MEKAESKEMKLREERSVDMFSKLPLEVTNNILLRLPFKSVAKGRCVSKKWCNILTDSKFL 196
M KE R S + F KLP E+ +IL R P S+ + + VS+ W + +
Sbjct: 1 MASNSGKEETSRNPGS-ESFEKLPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLLA 59
Query: 197 KMQLTQLSNIESDVFFYYRNSNNETALTYIEETDENTFSKNPVKPFKVHDYDYVKNTFGW 376
M L + + + F+ ++ L +E + K PF + V + F
Sbjct: 60 NMHLNRAAEQNLCLLFFSDWPRSKLELVQVEHPEPRKL-KTLKTPF-----ESVLSEF-- 111
Query: 377 LIKIWGSCNGFVCLSRINLFNPSLPENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSA 556
++ GSCNG +CL + F+ ++P Y++NP T EC ELP +E S S
Sbjct: 112 --EVVGSCNGLICL--YDYFS----DDPLYIYNPFTIECRELPRVEA--------SPHSV 155
Query: 557 VCS--SGFGFDESKQEFKVV-LVMFTQCESDTPAVDSEVKIYTLGSPSWRKKTCNAPGLF 727
+C GFGF +E+KV+ +V + Q +D E + T +P+WR G
Sbjct: 156 ICRVVFGFGFHPKMEEYKVIKIVYYKQGNNDFSGGAPEAFVLTANTPTWR--NIGKIGYD 213
Query: 728 RSCENVSVYFHGCLHWL--ILDENSRRYGPLIVSFDLGVEEFGTVPTPGSKMFKHSFQYY 901
+ + LHWL L +Y IVSFDL E+F VP PG Y
Sbjct: 214 LNGPTSEALVNEKLHWLTFCLVHEEVKYRE-IVSFDLETEQFQDVPRPGCGGLDQI--NY 270
Query: 902 SIGVLEGNLASVEFSPETYIHVWVMKRYKVKKSWVRQFSIEH--------NSV-----CR 1042
+ L G L+++ E +W+MK Y VK SW ++ + + N+V +
Sbjct: 271 HLVTLRGCLSAIVSCNEGSNEIWMMKIYNVKASWRKEMIVRNYVPQGLRLNTVPPARRRK 330
Query: 1043 QGLRCRYIELVKLTKKGELLFLCNCQYLVSYNITGKWCRFLRVEGVKKVKDGSKLLAHPL 1222
G + R ++ K GELL L C+ +VSYN + L +G+ + LA
Sbjct: 331 NGYQGRRFRVLCDLKNGELLLLYGCRCIVSYNPETGEFKELNFQGLP-----LEFLAFVH 385
Query: 1223 VGSLISLKSAYGL 1261
GSLIS+ + +G+
Sbjct: 386 SGSLISVNTVFGM 398
>ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arabidopsis lyrata subsp.
lyrata] gi|297328298|gb|EFH58717.1| hypothetical protein
ARALYDRAFT_896735 [Arabidopsis lyrata subsp. lyrata]
Length = 414
Score = 123 bits (309), Expect = 1e-25
Identities = 127/440 (28%), Positives = 194/440 (44%), Gaps = 20/440 (4%)
Frame = +2
Query: 14 AMEKAESKEMKLREERSVDMFSK----LPLEVTNNILLRLPFKSVAKGRCVSKKWCNILT 181
A + + +E EER+ D S LP E+ ILLRLP KS+ + RCVSK C++
Sbjct: 3 AANREKQRENDDGEERTNDEASPGLLFLPHEIITEILLRLPTKSIGQCRCVSKLLCSLSP 62
Query: 182 DSKFLKMQLTQLSNIESDVFFY--------YRNSNNETALTYIEETDEN-TFSKNPVKPF 334
F+K L + ++ + V Y + E + + + N +P
Sbjct: 63 SPGFVKSHLERSNHRKMIVSTYNLYSVDVDWIGDGCEGSRESVAAVELNYPLKDDPSMMD 122
Query: 335 KVHDYDYVKNTFGWLIKIWGSCNGFVCLSRINLFNPSLPENPFYVFNPITGECIELPHLE 514
++ + Y ++ W++ I GS NG VCLS S + P ++FNP TG+ LP
Sbjct: 123 QIGRHSYRRS---WVV-IVGSSNGLVCLS----LGASYKKVPVFLFNPTTGDSKRLPEAP 174
Query: 515 VLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVLVMFTQCESDTPAVDSEVKIYTLGSPSW 694
V E S GFGFD+ ++KVV ++ T S+ +D+ V Y+L + SW
Sbjct: 175 V-----DTPVESFNFRSYGFGFDDHTHDYKVVKLVATSV-SNQHILDASV--YSLKANSW 226
Query: 695 RK------KTCNAPGLFRSCENVSVYFHGCLHWLILDENSRRYGPLIVSFDLGVEEFGTV 856
R+ K NA F +C V+F+G +HW++ R +I+ FDL EEF +
Sbjct: 227 RRICILNYKGSNA---FHTC---GVHFNGAIHWVLTRHEDHR---VILVFDLTTEEFREM 277
Query: 857 PTPG-SKMFKHSFQYYSIGVLEGNLASVEFSPETYIHVWVMKRYKVKKSWVRQFSIEHNS 1033
P P ++ H + +G L G L V + +WVM Y KSW R
Sbjct: 278 PFPDEAEDCSHKRGEFMVGCLNGRLCVVNHCNGQHDDIWVMNEYGEAKSWSRMRMSLSYW 337
Query: 1034 VCRQGLRCRYIELVKLTKKGELLFLCNCQYLVSYNITGKWCRFLRVEGVKKVKDGSKLLA 1213
V R + + V L G+ +V YN R + + G K G A
Sbjct: 338 VMRPQCSTKNDDEVLLDVDGD---------MVLYNFKTDASRRMSIRGFKV---GVGFEA 385
Query: 1214 HPLVGSLISLKSAYGLSKRS 1273
V SLI+ S+YG++ R+
Sbjct: 386 DTYVESLIA-PSSYGIASRA 404
>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
predicted protein [Populus trichocarpa]
Length = 408
Score = 123 bits (309), Expect = 1e-25
Identities = 113/419 (26%), Positives = 187/419 (44%), Gaps = 20/419 (4%)
Frame = +2
Query: 92 EVTNNILLRLPFKSVAKGRCVSKKWCNILTDSKFLKMQLTQLSNIESDVFFYYRNSNNET 271
E+T +IL RLP KS+ + RCVSK WC + F+ L + S + + R++ N
Sbjct: 6 EITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDATNLC 65
Query: 272 ALTYIEETDENTFSKNPVK--PFKVHDYDYVKNTFGWLIKIWGSCNGFVCLSR----INL 433
+ + D F+ +K P K D ++ GSCNG + L I L
Sbjct: 66 TV----DLDSPDFTSIELKNNPLKSDD---------CATEVMGSCNGLLALLNSDFSIAL 112
Query: 434 FNPSLPENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVL 613
+NPS E +P +ELP+ D ++ K S S GFG D +++KVV
Sbjct: 113 YNPSTREKKMIPVSP-----LELPN----DLDDSKVS--SLFNFYGFGHDPINEDYKVVR 161
Query: 614 VMFTQCESDTPAVDSEVKIYTLGSPSWRK--------KTCNAPGLFRSC-ENVSVYFHGC 766
+ +S EVK+Y+L S SW++ + P C V+ +
Sbjct: 162 FIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSA 221
Query: 767 LHW--LILDENSRRYGPLIVSFDLGVEEFGTVPTPGSKMFKHSFQYYSIGVLEGNLASVE 940
+HW ++ + LIV+FDLG EEF +P P +H ++GVL G L
Sbjct: 222 VHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQPDYSSNEHEM---NVGVLGGCLCVFC 278
Query: 941 FSPETYIHVWVMKRYKVKKSWVRQFSIEHNSVCRQGLRCRYIELVKL--TKKGELLFL-C 1111
+ +WVMK Y VK+SW ++ + + ++ ++ L +K G+ + L
Sbjct: 279 NKNCKQVEIWVMKEYGVKESWTHLCTV----IAQLQVKAFWLHARPLAYSKGGDKILLEL 334
Query: 1112 NCQYLVSYNITGKWCRFLRVEGVKKVKDGSKLLAHPLVGSLISLKSAYGLSKRSTSDKE 1288
+ ++ V Y++ + + +R+ G + +A VGSL++L G + TS K+
Sbjct: 335 DNRFFVWYDLRRRKSKIIRIRGAPPI-----FIAEICVGSLVTLN---GGGEGQTSGKD 385
>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
gi|222854763|gb|EEE92310.1| f-box family protein [Populus
trichocarpa]
Length = 396
Score = 122 bits (307), Expect = 2e-25
Identities = 92/323 (28%), Positives = 152/323 (47%), Gaps = 3/323 (0%)
Frame = +2
Query: 77 SKLPLEVTNNILLRLPFKSVAKGRCVSKKWCNILTDSKFLKMQLTQLSNIESDVFFYYRN 256
S LPLE+ IL RLP K + R VSK WC ++ F+K+ L + S+++ R
Sbjct: 2 SGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRT 61
Query: 257 SNNETALTYIEETDENTFSKNPVKPFKVHDYDYVKNTFGWLIKIWGSCNGFVCLSRINLF 436
+++ + + E N K ++ + G IK+ GS NG +C+S +
Sbjct: 62 TSHVHYMDF-----EQNLVLNDCVTLKELNHPLMCYNHG--IKVLGSVNGLLCISNV--- 111
Query: 437 NPSLPENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCS---SGFGFDESKQEFKV 607
+ V+NP T + +P L + E+K+ + CS GFG+D + ++K+
Sbjct: 112 -----VDDIAVWNPSTRKHRVVPFLPI----ELKRYFGTKSCSVYVFGFGYDSVRDDYKL 162
Query: 608 VLVMFTQCESDTPAVDSEVKIYTLGSPSWRKKTCNAPGLFRSCENVSVYFHGCLHWLILD 787
V + + +SEVK+Y+L SWR + + P V+ +G LHW++ +
Sbjct: 163 VRIA-QFGGGGKRSFESEVKVYSLRKQSWR-RIGDMPYCVHYPGANGVFANGALHWVVGE 220
Query: 788 ENSRRYGPLIVSFDLGVEEFGTVPTPGSKMFKHSFQYYSIGVLEGNLASVEFSPETYIHV 967
++V+ DLGVE++ V P +K Y +GVL G L + + V
Sbjct: 221 NPESNVANIVVALDLGVEDYREVLQP---EYKDKNFYIDLGVLRGCLCFLANFLGERVDV 277
Query: 968 WVMKRYKVKKSWVRQFSIEHNSV 1036
W+MK Y VK+SW + FS+ V
Sbjct: 278 WMMKEYGVKESWTKLFSVAQYEV 300
>ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328297|gb|EFH58716.1| F-box family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 427
Score = 121 bits (304), Expect = 4e-25
Identities = 130/457 (28%), Positives = 205/457 (44%), Gaps = 41/457 (8%)
Frame = +2
Query: 14 AMEKAESKEMKLREERSVDMFSK---LPLEVTNNILLRLPFKSVAKGRCVSKKWCNILTD 184
A+ KA KE + ++ + + LP E+ ILLRLP KS+ + RCVSK + ++ +D
Sbjct: 10 AIMKATKKERRREDDDGEEASPESLVLPPEIITEILLRLPAKSIGRFRCVSKLFYSLSSD 69
Query: 185 SKFLKMQLTQL-----------------SNIESDVFFYYRNSNNETA---LTYIEETDEN 304
F K L + N+ S F R+ + A L Y + D +
Sbjct: 70 PGFAKNHLDLILRNDAVKSLHRKLIVSSHNLYSLDFNSIRDGIRDLAAVELNYPLKDDPS 129
Query: 305 TFSKNPVKPFKVHDYD------------YVKNTFGWLIKIWGSCNGFVCLSRINLFNPSL 448
FS+ + H YD Y +N W ++I GS NG VC+S
Sbjct: 130 IFSEMIRNYVREHLYDDRRVMLKLNAKSYRRN---W-VEIVGSSNGLVCISP-------- 177
Query: 449 PENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVLVMFTQ 628
E ++NP TG+ LP E L + ++ + + GFGFD+ ++KVV ++ T
Sbjct: 178 GEGAVILYNPTTGDSKRLP--ETLRPKSVEYG-RDNFQTYGFGFDDLTDDYKVVKLVATS 234
Query: 629 CESDTPAVDSEVKIYTLGSPSWRKKTCNA-----PGLFRSCENVSVYFHGCLHWLILDEN 793
+ + +Y+L + SWR + CN G + S V+F+G +HW+ + +
Sbjct: 235 DDI------LDASVYSLKADSWR-RICNLNYEHNDGFYTS----GVHFNGAIHWVFAEIS 283
Query: 794 SRRYGPLIVSFDLGVEEFGTVPTP-GSKMFKHSFQYYSIGVLEGNLASVEFSPETYIHVW 970
+ ++V+FD+ EEF +P P ++ H F + +G L G L V E + +W
Sbjct: 284 HGQ--RVVVAFDIQTEEFREMPLPVEAEDCHHRFSNFVVGSLNGRLCVVNSCYEVHDDIW 341
Query: 971 VMKRYKVKKSWVRQFSIEHNSVCRQGLRCRYIELVKLTKKGELLFLCNCQYLVSYNITGK 1150
VM Y KSW R R L R ++ + TKK E + L +V YN
Sbjct: 342 VMSEYGEVKSWSR---------IRINLLYRSMKPLCSTKKDEEVLLELDGDMVLYNFETN 392
Query: 1151 WCRFLRVEGVKKVKDGSKLLAHPLVGSLISLKSAYGL 1261
L + GV K+ DG + A+ V SLIS ++YG+
Sbjct: 393 ASSNLGIRGV-KLSDGFE--ANTYVESLIS-PNSYGI 425