BLASTX nr result

ID: Coptis25_contig00007370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007370
         (1191 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263228.1| PREDICTED: uncharacterized protein LOC100261...   288   2e-75
ref|XP_002517938.1| conserved hypothetical protein [Ricinus comm...   282   1e-73
ref|XP_002319358.1| predicted protein [Populus trichocarpa] gi|2...   277   3e-72
emb|CAN83474.1| hypothetical protein VITISV_004797 [Vitis vinifera]   270   5e-70
ref|XP_002329416.1| predicted protein [Populus trichocarpa] gi|2...   269   1e-69

>ref|XP_002263228.1| PREDICTED: uncharacterized protein LOC100261981 [Vitis vinifera]
            gi|297739115|emb|CBI28766.3| unnamed protein product
            [Vitis vinifera]
          Length = 212

 Score =  288 bits (736), Expect = 2e-75
 Identities = 134/219 (61%), Positives = 165/219 (75%)
 Frame = -3

Query: 1096 MTGVLRTCLQSILKLVNAIIGMVGMALIIYALWLIRVWQRHMDGFSRDSPHSPIPWFIYA 917
            M  + R+C+QSILKLVN+IIGMVG+A+++YALW+IRVW RHMD +      S  PWFIY 
Sbjct: 1    MGRIFRSCMQSILKLVNSIIGMVGIAMVMYALWMIRVWNRHMDDYD-----SRAPWFIYT 55

Query: 916  SLGLGVSLCMIACSGHVAAETANGHCLSCYMVFIMLLTLLEAAVTADIYLNHDWEEDFPY 737
             LGLG +LC+  C GH AAETANG CL  YM++I  L +LEA VTAD++LNHDWEEDFP 
Sbjct: 56   FLGLGATLCLFTCFGHAAAETANGCCLYVYMMYIFFLLILEAGVTADVFLNHDWEEDFPE 115

Query: 736  DPTGKFDDFKHFVSSNFDFCKWVGLSVVAAQGLSVLLSMVLKALGSEQGQYYDSDDDYAP 557
            DPTG F +FK+FV SNF+ CKW+GLS++  QGLS+LL+MVLKALG    QYYDSDD+YAP
Sbjct: 116  DPTGSFHEFKNFVRSNFEICKWIGLSILFVQGLSILLAMVLKALGPH--QYYDSDDEYAP 173

Query: 556  ATLPLLVNQVHPSPYIVGQPHLTPKNDSWNIRIHEKTNR 440
               PLL N VHP PY+ G P    + D++  RI+EKT R
Sbjct: 174  TRAPLLRNAVHPPPYVAGDPFSGSRTDAYGKRINEKTGR 212


>ref|XP_002517938.1| conserved hypothetical protein [Ricinus communis]
            gi|223542920|gb|EEF44456.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 221

 Score =  282 bits (721), Expect = 1e-73
 Identities = 129/220 (58%), Positives = 170/220 (77%), Gaps = 1/220 (0%)
 Frame = -3

Query: 1096 MTGVLRTCLQSILKLVNAIIGMVGMALIIYALWLIRVWQRHMDGFS-RDSPHSPIPWFIY 920
            M  ++R+C+QSILKL+N++IGMVG+ +I+YA+WLIRVWQR M  F   D   +P PWFIY
Sbjct: 1    MVRLMRSCMQSILKLLNSVIGMVGLGMILYAVWLIRVWQREMGDFPFEDDSDNPAPWFIY 60

Query: 919  ASLGLGVSLCMIACSGHVAAETANGHCLSCYMVFIMLLTLLEAAVTADIYLNHDWEEDFP 740
              LGLGV+LC+I C GHVAAETANG CL  YM+F+ +L +LEA V+AD++LN DWE+DFP
Sbjct: 61   TFLGLGVTLCVITCVGHVAAETANGCCLYLYMLFVFVLFMLEAGVSADVFLNRDWEKDFP 120

Query: 739  YDPTGKFDDFKHFVSSNFDFCKWVGLSVVAAQGLSVLLSMVLKALGSEQGQYYDSDDDYA 560
             DPTG F+ FK F+ SNF+ CKW+GLS+V+ QGLS LL+++LKALG    QY DSDD++ 
Sbjct: 121  KDPTGSFNQFKDFIRSNFEICKWMGLSIVSVQGLSFLLALILKALGPH--QYCDSDDEFT 178

Query: 559  PATLPLLVNQVHPSPYIVGQPHLTPKNDSWNIRIHEKTNR 440
            P  +PLL N   P PY+VG P +  +ND+W+IRI+EK N+
Sbjct: 179  PDRVPLLNNAAIPPPYVVGSPVVGSRNDAWSIRINEKVNQ 218


>ref|XP_002319358.1| predicted protein [Populus trichocarpa] gi|222857734|gb|EEE95281.1|
            predicted protein [Populus trichocarpa]
          Length = 221

 Score =  277 bits (709), Expect = 3e-72
 Identities = 131/220 (59%), Positives = 165/220 (75%), Gaps = 1/220 (0%)
 Frame = -3

Query: 1096 MTGVLRTCLQSILKLVNAIIGMVGMALIIYALWLIRVWQRHMDGFSR-DSPHSPIPWFIY 920
            M  V+R+C+QSILKLVN +IGMVG+A+++Y++WLIRVW+R M GF   +      PWFIY
Sbjct: 1    MVSVMRSCIQSILKLVNCLIGMVGIAMVLYSIWLIRVWEREMGGFPFFEDDDDFTPWFIY 60

Query: 919  ASLGLGVSLCMIACSGHVAAETANGHCLSCYMVFIMLLTLLEAAVTADIYLNHDWEEDFP 740
              LGLGV+L +I C GH+AAETANG+CL  YM+FI LL +LEA VTAD+ LN DWEEDFP
Sbjct: 61   TFLGLGVALSVITCFGHIAAETANGYCLYLYMLFIFLLLMLEAGVTADVVLNRDWEEDFP 120

Query: 739  YDPTGKFDDFKHFVSSNFDFCKWVGLSVVAAQGLSVLLSMVLKALGSEQGQYYDSDDDYA 560
             DP+G FD FK FV SNF+ CKW+GLS+V  QGLS L++M+LKA+G      YDSDDDYA
Sbjct: 121  KDPSGSFDQFKGFVRSNFELCKWIGLSIVFVQGLSFLVAMILKAIGPHPS--YDSDDDYA 178

Query: 559  PATLPLLVNQVHPSPYIVGQPHLTPKNDSWNIRIHEKTNR 440
                PLL + VHP PY VG P +  +N++W+IRI EK N+
Sbjct: 179  SDRAPLLKDVVHPPPYAVGNPVMGSRNNAWSIRITEKMNQ 218


>emb|CAN83474.1| hypothetical protein VITISV_004797 [Vitis vinifera]
          Length = 276

 Score =  270 bits (690), Expect = 5e-70
 Identities = 132/243 (54%), Positives = 164/243 (67%), Gaps = 27/243 (11%)
 Frame = -3

Query: 1096 MTGVLRTCLQSILKLVNAIIGMVGMALIIYALWLIRVWQRHMDGFSRDSPHSPIPWFIYA 917
            M  + R+C+QSILKLVN+IIGMVG+A+++YALW+IRVW RHMD +      S  PWFIY 
Sbjct: 1    MGRIFRSCMQSILKLVNSIIGMVGIAMVMYALWMIRVWNRHMDDYD-----SRAPWFIYT 55

Query: 916  SLGLGVSLCMIACSGHVAAETANGHCLSCYMVFIMLLTLLEAAVTADIYLNHDWEEDFPY 737
             LGLG +LC+  C GH AAETANG CL  YM++I  L +LEA VTAD++LNHDWEEDFP 
Sbjct: 56   FLGLGATLCLFTCFGHAAAETANGCCLYVYMMYIFFLLILEAGVTADVFLNHDWEEDFPE 115

Query: 736  DPTGKFDDFKHFVSSNFDFCKWVGLSV---------------------------VAAQGL 638
            DPTG F +FK+FV SNF+ CKW+GLS+                           + +QGL
Sbjct: 116  DPTGSFHEFKNFVRSNFEICKWIGLSILFVQMQNCFCLRIYVFISPIIWFLLVDLPSQGL 175

Query: 637  SVLLSMVLKALGSEQGQYYDSDDDYAPATLPLLVNQVHPSPYIVGQPHLTPKNDSWNIRI 458
            S+LL+MVLKALG    QYYDSDD+YAP   PLL N VHP PY+ G P    + D++  RI
Sbjct: 176  SILLAMVLKALGPH--QYYDSDDEYAPTRAPLLRNAVHPPPYVAGDPFSGSRTDAYGKRI 233

Query: 457  HEK 449
            +EK
Sbjct: 234  NEK 236


>ref|XP_002329416.1| predicted protein [Populus trichocarpa] gi|222870466|gb|EEF07597.1|
            predicted protein [Populus trichocarpa]
          Length = 212

 Score =  269 bits (687), Expect = 1e-69
 Identities = 127/214 (59%), Positives = 162/214 (75%), Gaps = 1/214 (0%)
 Frame = -3

Query: 1087 VLRTCLQSILKLVNAIIGMVGMALIIYALWLIRVWQRHMDGFSR-DSPHSPIPWFIYASL 911
            V+R+C+QSILKL+N +IGMVG+A+++YA+WLIRVWQR +  F   D      PWFIY  L
Sbjct: 1    VMRSCIQSILKLLNCVIGMVGIAMMLYAVWLIRVWQREIGDFPFFDDDDDFSPWFIYTFL 60

Query: 910  GLGVSLCMIACSGHVAAETANGHCLSCYMVFIMLLTLLEAAVTADIYLNHDWEEDFPYDP 731
            GLGV+L MI C GH+AAETANG CL  YM F+ LL +LEA VTAD++LN DWEEDFP DP
Sbjct: 61   GLGVTLSMITCLGHIAAETANGCCLYLYMFFVFLLLMLEAGVTADVFLNRDWEEDFPKDP 120

Query: 730  TGKFDDFKHFVSSNFDFCKWVGLSVVAAQGLSVLLSMVLKALGSEQGQYYDSDDDYAPAT 551
            +G FD FK F+ S+F+ CKW+GLS+V+ QGLS L++M+LKA+G      YDSDDDYA   
Sbjct: 121  SGSFDQFKGFIRSSFELCKWIGLSIVSVQGLSFLVAMILKAVGPH--PCYDSDDDYASDR 178

Query: 550  LPLLVNQVHPSPYIVGQPHLTPKNDSWNIRIHEK 449
            +PLL + VHP PY+V  P    +ND+W+IRI+EK
Sbjct: 179  VPLLKDVVHPPPYVVVNPVTGSRNDAWSIRINEK 212


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