BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007358
         (1153 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267944.2| PREDICTED: protein ACCUMULATION AND REPLICAT...   309   1e-81
ref|XP_002521879.1| 1-phosphatidylinositol-4-phosphate 5-kinase,...   276   9e-72
emb|CBI27516.3| unnamed protein product [Vitis vinifera]              256   1e-65
ref|XP_004166810.1| PREDICTED: protein ACCUMULATION AND REPLICAT...   249   7e-64
ref|NP_177638.2| GTP binding protein [Arabidopsis thaliana] gi|3...   236   8e-60

>ref|XP_002267944.2| PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS
            3-like [Vitis vinifera]
          Length = 727

 Score =  309 bits (791), Expect = 1e-81
 Identities = 165/315 (52%), Positives = 222/315 (70%), Gaps = 3/315 (0%)
 Frame = +3

Query: 213  DNNFVQVIGIGSRKDAILDFCLDSPFQSSFSSIRFWNIISSDSSPVKLQQRTIGEDAMMS 392
            D+ FV+VIGIGSRKDA++DFCL+SP QSS  S+RFWNI   DS  V LQQR+IG D  ++
Sbjct: 14   DSEFVEVIGIGSRKDAVIDFCLNSPLQSS--SVRFWNIFRRDSLKVHLQQRSIGRD--IT 69

Query: 393  MELQEFQLSAP---RTVILVASAGYGSDHITAIELLKAVKSAEGLAVGIVLKPFSFEGRR 563
              L E  LSA    +T++LVASAGYGSDHITAI++L+  +SA GLA+G++LKPFSFEG+R
Sbjct: 70   PVLVETFLSAQQHLKTIVLVASAGYGSDHITAIDILRTTRSANGLAIGVILKPFSFEGKR 129

Query: 564  RQEEVTELVTKLREHTNCCIVVDTDVLLKKEVVTLAEALKSANNVVLLSINSIFVLMSXX 743
            RQ EV  LV +L+EHTN CIV+DTD LLKK++VTL EALK+A+N VLL+IN+I VL+S  
Sbjct: 130  RQNEVKNLVERLQEHTNFCIVIDTDTLLKKDLVTLDEALKTADNGVLLAINAISVLIS-- 187

Query: 744  XXXXXXXXXXXXXXXXXXXXXXECPQNIKKEFGVPXXXXXXXXXXXARVGYGAGNNMKSS 923
                                  + P +  KE   P           A++G+GAG N+++S
Sbjct: 188  ---------------GMHKKLIDAPHDNMKELKGPEIIKILESHKEAKIGFGAGYNIETS 232

Query: 924  IVRAVFDCPFIAGGLKELNGVVFWTLACAVVIDNSNFHTFLHTFRQATGWQNELVLSIVH 1103
            I++A++DCPF++  LK+LNG V   LA +V+I+NS+  +FLH FR+ T    E+++SI+H
Sbjct: 233  ILQAIYDCPFLSVCLKDLNGTVICILASSVIINNSDVLSFLHVFRKTTECTREIIISIIH 292

Query: 1104 EPNLEPNLFVSTVIV 1148
            EPNLEPNL V+TVI+
Sbjct: 293  EPNLEPNLIVTTVII 307


>ref|XP_002521879.1| 1-phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus
            communis] gi|223538917|gb|EEF40515.1|
            1-phosphatidylinositol-4-phosphate 5-kinase, putative
            [Ricinus communis]
          Length = 760

 Score =  276 bits (705), Expect = 9e-72
 Identities = 157/375 (41%), Positives = 228/375 (60%), Gaps = 4/375 (1%)
 Frame = +3

Query: 36   STLSSFPPNSNQLF---NFSKRRKHYRNPNHVSFQPQISFKSDQISNDYYLYPQCKDVEW 206
            S +SS     N  F   +F+KR     N N+  F P+I+   +   ND   +     V +
Sbjct: 19   SCISSKSAIYNHFFRKIHFNKRVSSISNSNNNRF-PRIAGSLEYKGNDRTEFRGDDSVRF 77

Query: 207  REDNNFVQVIGIGSRKDAILDFCLDSPFQSSFSSIRFWNIISSDSSPVKLQQRTIGEDAM 386
              ++ FV+VIGIGSR D++LDFC DSPFQ S SS+RFWNI   DS  V+LQ+R   +D +
Sbjct: 78   LSESKFVEVIGIGSRIDSVLDFCSDSPFQLS-SSLRFWNIHVKDSLNVRLQERGFEKDVI 136

Query: 387  MS-MELQEFQLSAPRTVILVASAGYGSDHITAIELLKAVKSAEGLAVGIVLKPFSFEGRR 563
               +E  +F  S  + +ILVASAGYG DH+TAI++LK V+S +G AV I L+PFSFEG+R
Sbjct: 137  PRVLEHSQFLQSCSKAIILVASAGYGLDHLTAIDILKTVRSTDGFAVAICLRPFSFEGQR 196

Query: 564  RQEEVTELVTKLREHTNCCIVVDTDVLLKKEVVTLAEALKSANNVVLLSINSIFVLMSXX 743
            RQ+EV  LV +++E+TN CI +DTD LLKK++VTL EALK+AN  VLL++N++ +L+S  
Sbjct: 197  RQDEVKNLVGEIQEYTNFCIDIDTDTLLKKDLVTLDEALKTANTAVLLAMNAVSILISEM 256

Query: 744  XXXXXXXXXXXXXXXXXXXXXXECPQNIKKEFGVPXXXXXXXXXXXARVGYGAGNNMKSS 923
                                      N  KE  +            A++G+GAGN++KSS
Sbjct: 257  HLKLFAAL-----------------HNNVKELTISEVLKILESHKEAKIGFGAGNSVKSS 299

Query: 924  IVRAVFDCPFIAGGLKELNGVVFWTLACAVVIDNSNFHTFLHTFRQATGWQNELVLSIVH 1103
            I+ A++DCPFI  GL+  NG++   +A +  I+N +  + L TF Q   +  E+++S  H
Sbjct: 300  ILEALYDCPFIGAGLENSNGIIICNIASSDFIENRDVDSSLLTFHQTAKYMGEIIISSAH 359

Query: 1104 EPNLEPNLFVSTVIV 1148
            EPNL+ N+ V+T+I+
Sbjct: 360  EPNLDSNMIVTTIIM 374


>emb|CBI27516.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  256 bits (653), Expect = 1e-65
 Identities = 139/279 (49%), Positives = 190/279 (68%), Gaps = 3/279 (1%)
 Frame = +3

Query: 321  NIISSDSSPVKLQQRTIGEDAMMSMELQEFQLSAP---RTVILVASAGYGSDHITAIELL 491
            NI   DS  V LQQR+IG D  ++  L E  LSA    +T++LVASAGYGSDHITAI++L
Sbjct: 17   NIFRRDSLKVHLQQRSIGRD--ITPVLVETFLSAQQHLKTIVLVASAGYGSDHITAIDIL 74

Query: 492  KAVKSAEGLAVGIVLKPFSFEGRRRQEEVTELVTKLREHTNCCIVVDTDVLLKKEVVTLA 671
            +  +SA GLA+G++LKPFSFEG+RRQ EV  LV +L+EHTN CIV+DTD LLKK++VTL 
Sbjct: 75   RTTRSANGLAIGVILKPFSFEGKRRQNEVKNLVERLQEHTNFCIVIDTDTLLKKDLVTLD 134

Query: 672  EALKSANNVVLLSINSIFVLMSXXXXXXXXXXXXXXXXXXXXXXXXECPQNIKKEFGVPX 851
            EALK+A+N VLL+IN+I VL+S                        + P +  KE   P 
Sbjct: 135  EALKTADNGVLLAINAISVLIS-----------------GMHKKLIDAPHDNMKELKGPE 177

Query: 852  XXXXXXXXXXARVGYGAGNNMKSSIVRAVFDCPFIAGGLKELNGVVFWTLACAVVIDNSN 1031
                      A++G+GAG N+++SI++A++DCPF++  LK+LNG V   LA +V+I+NS+
Sbjct: 178  IIKILESHKEAKIGFGAGYNIETSILQAIYDCPFLSVCLKDLNGTVICILASSVIINNSD 237

Query: 1032 FHTFLHTFRQATGWQNELVLSIVHEPNLEPNLFVSTVIV 1148
              +FLH FR+ T    E+++SI+HEPNLEPNL V+TVI+
Sbjct: 238  VLSFLHVFRKTTECTREIIISIIHEPNLEPNLIVTTVII 276


>ref|XP_004166810.1| PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS
            3-like, partial [Cucumis sativus]
          Length = 707

 Score =  249 bits (637), Expect = 7e-64
 Identities = 142/358 (39%), Positives = 221/358 (61%), Gaps = 2/358 (0%)
 Frame = +3

Query: 81   FSKRRKHYRNPNHVSFQPQI-SFKSDQISNDYYLYPQCKDVEWREDNNFVQVIGIGSRKD 257
            F +R+   R P + +  P + +  +  +SN        +D+ W +D+ FV+VIGIGSRK+
Sbjct: 39   FHRRKMFLRFPEYRNSYPFLHTTPNASLSNATGRSNNERDI-W-DDHEFVEVIGIGSRKE 96

Query: 258  AILDFCLDSPFQSSFSSIRFWNIISSDSSPVKLQQRTIGEDAMMSMELQEFQL-SAPRTV 434
            A+LDFCL+S   +S  S+RFW I+  DSS V+L QR + +D    M      L S  + V
Sbjct: 97   AVLDFCLESALMTS--SLRFWQIVKHDSSKVQLLQRFVEKDYSPRMIDVPLSLQSCSKAV 154

Query: 435  ILVASAGYGSDHITAIELLKAVKSAEGLAVGIVLKPFSFEGRRRQEEVTELVTKLREHTN 614
            ILV SAGYG D+  A+++L+ ++SA G  V IVLKPFSFEG+RRQ+EV  LV +L+EHT+
Sbjct: 155  ILVVSAGYGFDYSAAVDMLRTIRSANGFTVTIVLKPFSFEGKRRQDEVKRLVGRLKEHTS 214

Query: 615  CCIVVDTDVLLKKEVVTLAEALKSANNVVLLSINSIFVLMSXXXXXXXXXXXXXXXXXXX 794
              I +DTD LL+K++VTL +A++SANN VLL+INS+ ++ S                   
Sbjct: 215  FLIDIDTDRLLEKDLVTLDDAVRSANNAVLLAINSMSIVKS-----------------EM 257

Query: 795  XXXXXECPQNIKKEFGVPXXXXXXXXXXXARVGYGAGNNMKSSIVRAVFDCPFIAGGLKE 974
                 + PQN  KE G              ++G+GAG+N ++SI+++++DCPF+   LK+
Sbjct: 258  IIKFVDEPQNDLKELGAMDVMEILENLKEGKIGFGAGHNFRTSILKSIYDCPFLTVHLKD 317

Query: 975  LNGVVFWTLACAVVIDNSNFHTFLHTFRQATGWQNELVLSIVHEPNLEPNLFVSTVIV 1148
            L G+V   +A + +ID+++  T L TFR+ T +  +++LS + + N+EPN  ++TV++
Sbjct: 318  LKGMVVCIVASSSIIDDNDKSTLLKTFREVTTYTGKVILSTIQDLNIEPNFLMTTVLI 375


>ref|NP_177638.2| GTP binding protein [Arabidopsis thaliana]
            gi|327507752|sp|Q6F6B5.2|ARC3_ARATH RecName: Full=Protein
            ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3; Flags:
            Precursor gi|332197540|gb|AEE35661.1| GTP binding protein
            [Arabidopsis thaliana]
          Length = 741

 Score =  236 bits (602), Expect = 8e-60
 Identities = 133/312 (42%), Positives = 190/312 (60%), Gaps = 1/312 (0%)
 Frame = +3

Query: 216  NNFVQVIGIGSRKDAILDFCLDSPFQSSFSSIRFWNIISSDSSPVKLQQRTIGED-AMMS 392
            + F++V+ IGSRK++I+D CLDSPF S    +RFW+I    S  + LQQR   +D A+ +
Sbjct: 74   DEFIEVLVIGSRKESIMDSCLDSPFPSL--PLRFWSISKDSSGGLVLQQRLNHQDNALKT 131

Query: 393  MELQEFQLSAPRTVILVASAGYGSDHITAIELLKAVKSAEGLAVGIVLKPFSFEGRRRQE 572
            M   E   S PR  ILVASAGYGSD + AI +L AV+S   LAV ++LKPFSFEGR+R E
Sbjct: 132  MNPIELLQSRPRAFILVASAGYGSDQVEAINILSAVRSGGNLAVAVLLKPFSFEGRKRLE 191

Query: 573  EVTELVTKLREHTNCCIVVDTDVLLKKEVVTLAEALKSANNVVLLSINSIFVLMSXXXXX 752
            EV EL  KL++HTN CI +D +VLL+K++VTL EAL++ANN V ++IN+   L+S     
Sbjct: 192  EVNELARKLQQHTNFCIDIDIEVLLQKDLVTLDEALRNANNAVSMAINAASALIS----- 246

Query: 753  XXXXXXXXXXXXXXXXXXXECPQNIKKEFGVPXXXXXXXXXXXARVGYGAGNNMKSSIVR 932
                               +      KE               A+VG+G G+N+K+SI+R
Sbjct: 247  ------------GMHGNFIDVMHKDLKELEGSEVKTILESYKEAKVGFGVGHNLKTSILR 294

Query: 933  AVFDCPFIAGGLKELNGVVFWTLACAVVIDNSNFHTFLHTFRQATGWQNELVLSIVHEPN 1112
            A++DCPF   GLK+LN ++   +A +V +   +  T L TFRQ   +  ++++S VHEP+
Sbjct: 295  AIYDCPFFRPGLKDLNAII-CIVASSVPLQKKDVKTILRTFRQTMEYTGDIIVSTVHEPD 353

Query: 1113 LEPNLFVSTVIV 1148
            LEP + V+T  +
Sbjct: 354  LEPKVRVTTFFI 365