BLASTX nr result
ID: Coptis25_contig00007354
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00007354
(2628 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|2... 251 7e-64
ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containin... 217 1e-53
emb|CBI30597.3| unnamed protein product [Vitis vinifera] 211 6e-52
emb|CAN59796.1| hypothetical protein VITISV_001904 [Vitis vinifera] 204 1e-49
ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [... 158 8e-36
>ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|222870892|gb|EEF08023.1|
predicted protein [Populus trichocarpa]
Length = 669
Score = 251 bits (641), Expect = 7e-64
Identities = 213/630 (33%), Positives = 286/630 (45%), Gaps = 53/630 (8%)
Frame = +2
Query: 701 AKKTKSAFVGKKKGASEILMRDGSANKVVNRSSCSKKENKLMHMQSG---ENVKLKASSS 871
A +T FV +L + + N SK+E K + ++S E + + S
Sbjct: 87 AVETTEPFVITGIEVDVVLSKRNCLGQEANVVLDSKEELKPVDVKSEDSKEQTESRISRL 146
Query: 872 LTPKIRPRSLSPPIESEDGTKRPAIICDFFARGWCIKGSSCKFLHRKDGMDNTSMFSNQD 1051
+ R RSLSP E DG KR A+ICDFFA+GWCI+GSSC+FLH + DNT D
Sbjct: 147 VASGTRARSLSPSTELRDGNKRAAVICDFFAKGWCIRGSSCRFLHTTNKADNTGQQLGVD 206
Query: 1052 VPTKSSNDNFKDSGLRVENEKSSVQKSKPLASSESQRSRQSVDKHDKHCSLVPDDLKSDN 1231
+ D F + + P+A+S + + S H L P
Sbjct: 207 -EVATREDQFDEGVRNILETPKFPHFPDPVAASTGKEATFS--SHFSSERLPP------- 256
Query: 1232 PGSGWQHLGSASGFQCKSNNSEEYNRSLGIPLLNEIRNHHSHFMDDKRLNGEEYVRGYSS 1411
+H + Q + + +GIPL + K+ + + G+SS
Sbjct: 257 ----LEHKENERLHQLDDKHKLSLRQRVGIPL------------NAKQFSSSKDDPGFSS 300
Query: 1412 SMTNLLPEHRFLSSGSPIPSSVYR---NSSSSLAYEKSIGEPPNLILESQSMKYVAXXXX 1582
S ++ E+ F Y N SS ++ S +L SQ +
Sbjct: 301 SFKDVGIEN-FRQQWPATDYGSYTSLINRGSSFSFSSSFDTS---LLGSQKL-------- 348
Query: 1583 XXXXXXXXXXXXXXXXXXXXMLGHSPSTFYSRPEQEILSLHRSTG-------HHFRSTIS 1741
L S S F S E E LSL G H + + +
Sbjct: 349 ----------LDSDRASRSSSLLQSASAF-SGSEPESLSLASVPGDQLRHAEHKTKISSN 397
Query: 1742 NWEPSVPFRPSFHIS-SIMSSPKNQYDPLLDSIDPPNGGERTVWGSSVSQSATTHNTSNQ 1918
+WEPSVPFRPSF I+ ++SS ++YDPL DS PN G+++ S S A+ NTS Q
Sbjct: 398 DWEPSVPFRPSFFITPEMISSAGSKYDPLRDSFVLPNVGDKSFKFSFFSLGASISNTSQQ 457
Query: 1919 QANGDP----------------ISFHQKPQYGLSENSVSSHGVDGFTTPADVTATFGAQQ 2050
GD IS H KP LS+ + S+ G D FTT A VT G
Sbjct: 458 PIYGDSLSNRNFGTEFNGDKSTISSHDKPHGSLSDKNCSTPGKDSFTT-ATVTGGAGTAD 516
Query: 2051 QNNRSLSKEENRL-----KSGRFLN------------STNAKDVDLDHKHSH------QG 2161
N S KEE+ K R N S + KD+ D + Q
Sbjct: 517 GENGSALKEESASGIGYDKVNRVTNKIDRDARPQTDGSRHKKDLKADSVRQNNDMEVDQK 576
Query: 2162 DGGNHTKESKALKLFRASLIEFVKELVKPYWREGHLSKDAHNTIVKKAVEKVLHSLQPQQ 2341
GG+ KESK L+ FR++LI+FVK+L+KP WREGHLSKDAHNTIVKK VEKVL +LQP Q
Sbjct: 577 IGGDTQKESKVLRHFRSALIDFVKDLLKPTWREGHLSKDAHNTIVKKTVEKVLSTLQPHQ 636
Query: 2342 IPNTTESTTEYLSASQPKLAKLVEGYVGRY 2431
IP T ES +YLS+SQPK+AKLVEGY+ +Y
Sbjct: 637 IPATVESIKQYLSSSQPKMAKLVEGYISKY 666
>ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
[Glycine max]
Length = 713
Score = 217 bits (553), Expect = 1e-53
Identities = 204/712 (28%), Positives = 301/712 (42%), Gaps = 57/712 (8%)
Frame = +2
Query: 467 TQVMELARVGKGDSKTETLSKNKVV--YEAK---RSEESISGNKGATSEPLKRTPIEACK 631
T ME V S TL K ++ YE +S E+++ + S+ L A
Sbjct: 64 THCMEENNVMLKKSDIPTLKKEELPLKYEISSHPKSRENLTSVEVCRSQGLDVEVENAGS 123
Query: 632 SAQKQYGESHCGTQDHSISTFTGAKKTKSAFVGKKKGASEI-------LMRDGSANKVVN 790
QK+ +C +S + G S K + + L RD N
Sbjct: 124 LLQKKTFRGYCVPGCNSKANLCGDNNIDSRARATKSSSDTVQDMVIGPLPRDCLVEDS-N 182
Query: 791 RSSCSKKENKLMHMQSGENVKLKASSSLTPKIRPRSLSPPIESEDGTKRPAIICDFFARG 970
S+ + L M+S ++ K S R R+LSP E +DG KRP IICDFFA+G
Sbjct: 183 GGQNSRNKIMLSEMESRDDAKQMTS-------RTRNLSPSAEIKDGNKRPRIICDFFAKG 235
Query: 971 WCIKGSSCKFLHRKDGMDNTSMFSNQD-VPTKSSNDNFKDSGLRVENEKSSVQKSKPLAS 1147
WCI+GSSC FLH KD DNT + D V T + G+R E+S + + + S
Sbjct: 236 WCIRGSSCSFLHIKDTGDNTDQEAEADSVSTYQKRQLKVEEGVRENVERSRMNEQEATPS 295
Query: 1148 SESQRSRQSVDKHDKHCSLVPDDLKSDNPGSGWQHLGSASGFQCKSNNSEEYNRSLGIPL 1327
+ +Q D +L PD+ + + + C +
Sbjct: 296 WHPSQEKQKFPPRD---NLFPDNRFPFSASDNYLSPNLSLNSTCADGMATP--------- 343
Query: 1328 LNEIRNHHSHFMDDKRLNGEEYVRGYSSSMTNLLPEH----RFLSSGSPIPSSVYRNSSS 1495
RN H + +GY+S++ + P +F +S + + S
Sbjct: 344 ----RNQHMY-------------KGYTSTLLSHSPNSSLVTQFAASSMSLSHRILAQSGR 386
Query: 1496 SLAYEKSIGEPPNLILESQSMKYVAXXXXXXXXXXXXXXXXXXXXXXXXMLGHSPSTFYS 1675
SL + S+G S+K++ S STF
Sbjct: 387 SLPFSSSLGAS-----NVDSLKFLNTDKEYLT---------------------SKSTFSG 420
Query: 1676 RPEQEILSLHRS------TGHHFRSTISNWEPSVPFRPSFHISSI-MSSPKNQYDPLLDS 1834
++ + S G+ + +WEPSVPFRPSF I+S+ +SSP + YDPL DS
Sbjct: 421 SGREDFSLVSSSRVPSYPAGYKSKICSYDWEPSVPFRPSFFITSMNVSSPGDLYDPLRDS 480
Query: 1835 IDPPNGGERT------VWGSSVSQSATTH----------NTSNQQANGDPISFHQKPQYG 1966
I+ PN G+ + + GS+V S+ + SN + +S H K
Sbjct: 481 IEIPNIGDGSLKASLLIHGSNVQVSSQVRTYGDSAVVGEHMSNLNDDKSSVSSHNKFCEN 540
Query: 1967 LSENSVSSHGVDGFTTPADVTA------------TFGAQQQNNRSLSKEENRLKSGRFLN 2110
+ H D ++T+ TFG E + +
Sbjct: 541 EPNKNCLPHEKDCLPPETEITSGTYQGKMGMGQHTFGVADSTKNERDVTECDARRHGEGS 600
Query: 2111 STNAKDVDLDHKHSHQGD-----GGNHTKESKALKLFRASLIEFVKELVKPYWREGHLSK 2275
K VD D K+ H+ D G+ KESKALK FRA+L++ VKEL+KP W EGHLSK
Sbjct: 601 GHKKKRVDRDKKN-HEMDVDFQIDGSIQKESKALKFFRAALVDHVKELLKPAWHEGHLSK 659
Query: 2276 DAHNTIVKKAVEKVLHSLQPQQIPNTTESTTEYLSASQPKLAKLVEGYVGRY 2431
DAH IVKK+V+KV+ +L+P QIP ++ +Y+S+SQ K+AKLV GYV +Y
Sbjct: 660 DAHIMIVKKSVDKVVSTLEPHQIP-IMDTAKQYVSSSQVKIAKLVNGYVNKY 710
>emb|CBI30597.3| unnamed protein product [Vitis vinifera]
Length = 745
Score = 211 bits (538), Expect = 6e-52
Identities = 193/660 (29%), Positives = 283/660 (42%), Gaps = 54/660 (8%)
Frame = +2
Query: 614 PIEACKSAQKQYGESHCGTQDHSISTFTGAKKTKSAFVGKKKGASEILMRDGSANKVVNR 793
P E ++ + + S A+ TK V K A I MRD + N
Sbjct: 124 PYEENRNTKSAVDGKYTEAMPEKKSEIMDARNTKPFSVPGKGAAVVIPMRDVFGEEA-NI 182
Query: 794 SSCSKKENKLMHMQSGENVKLKASSSLTPKIRPRSLSPPIESEDGTKRPAIICDFFARGW 973
CS KE K + QS E + +AS +R RSLSP +S+D KRPAIIC +F++GW
Sbjct: 183 VQCSNKEIKQIDFQSPEEMNQRASRLAASLLRRRSLSPT-DSKDENKRPAIICQYFSQGW 241
Query: 974 CIKGSSCKFLHRKDGMDNTSMFSNQDVPTKSSN-DNFKDSGLRVENEKSSV----QKSKP 1138
C+ G +CKF+H D MDNT+ DV + ++ D GL E++++ + +
Sbjct: 242 CVNGPNCKFMHNIDSMDNTNQQIGGDVAIATRRYESQADKGLSEIPERTTLFCFPGRVRQ 301
Query: 1139 LASSESQRSRQSVDKHDKHCSLVPDDLKSDNPGSGWQHLGSASGFQCKSNNSEEYNRSLG 1318
+ ES Q KH + SL DDL + GF S Y
Sbjct: 302 WENEESLTWHQYNGKH-RFSSLQRDDL--------------SYGFPADSQRFPMYK---- 342
Query: 1319 IPLLNEIRNHHSHFMDDKRLNGEEYVRGYSSSMTNLLPEHRFLSSGSP---IPSSVYRNS 1489
+ RN+ S G + G L PE+ S GS I S Y+ S
Sbjct: 343 ----DGPRNYVS-----PNTEGSYPILG-----NRLFPEYGSFSVGSSTLAISSKTYQTS 388
Query: 1490 ----SSSLAYEKSIGEPPNLILESQSMKYVAXXXXXXXXXXXXXXXXXXXXXXXXMLGHS 1657
S + + E G+ L + ++ G+S
Sbjct: 389 RTLSSKATSLEGLAGKQNEFTLNDYASPVLSHQPNPRVDTTLQTTNLLPSHQSSAWGGYS 448
Query: 1658 PSTFYSRPEQEILSLHRSTGHHFRSTISNWEPSVPFRPS-FHISSIMSSPKNQYDPLLDS 1834
S Q+ + T + + +WEPS+PFRPS F + MSS ++ +D + D+
Sbjct: 449 FSQNAGPCVQKCVDSDTKT----KFSSDDWEPSIPFRPSYFSAFTDMSSARSVHDTVGDT 504
Query: 1835 IDPPNGGERTVWGSSVSQSATTHNTSNQQANGDP----------------ISFHQKPQYG 1966
+ G+R S +Q A+ +S+Q+ DP I H K
Sbjct: 505 CEEHPLGDRPYKVSCPTQGASILGSSHQRVYHDPVLPGTLGPEYNADIESIHIHDKFDQS 564
Query: 1967 LSENSVSSHGVDGFTTPADVTATFGAQQQNNRSLSKEENRLKSGRFLNSTNAKDVDLDHK 2146
+ V H D FT + + A+ Q +++LK G+ T +DV D
Sbjct: 565 TLDKGVYGHQRDFFTNETEPAGSSVAELQ--------DSQLKEGKPDGHTRVEDVS-DQN 615
Query: 2147 HSHQGDGGNHT-------------------------KESKALKLFRASLIEFVKELVKPY 2251
+ DG +H KESKAL+ FR LI+F+K+LV+P
Sbjct: 616 PRNYSDGASHEEELKMEWGKQSNAKCDDHKIDEDVQKESKALRHFRFVLIDFIKDLVRPT 675
Query: 2252 WREGHLSKDAHNTIVKKAVEKVLHSLQPQQIPNTTESTTEYLSASQPKLAKLVEGYVGRY 2431
W G LSKDAHN+IVK++V+KVL +L+P QIP+T E+ YLS SQPK+AKLV+GYV ++
Sbjct: 676 WHRGQLSKDAHNSIVKRSVDKVLSTLEPHQIPSTEEAIHHYLSVSQPKIAKLVQGYVEKH 735
>emb|CAN59796.1| hypothetical protein VITISV_001904 [Vitis vinifera]
Length = 779
Score = 204 bits (519), Expect = 1e-49
Identities = 191/654 (29%), Positives = 279/654 (42%), Gaps = 54/654 (8%)
Frame = +2
Query: 614 PIEACKSAQKQYGESHCGTQDHSISTFTGAKKTKSAFVGKKKGASEILMRDGSANKVVNR 793
P E ++ + + S A+ TK V K A I MRD + N
Sbjct: 136 PYEENRNTKSAVDGKYTEAMPEKKSEIMDARNTKPFSVPGKGAAVVIPMRDVFGEEA-NI 194
Query: 794 SSCSKKENKLMHMQSGENVKLKASSSLTPKIRPRSLSPPIESEDGTKRPAIICDFFARGW 973
CS KE K + QS E + +AS +R RSLSP +S+D KRPAIIC +F++GW
Sbjct: 195 VQCSNKEIKQIDFQSPEEMNQRASRLAASLLRRRSLSPT-DSKDENKRPAIICQYFSQGW 253
Query: 974 CIKGSSCKFLHRKDGMDNTSMFSNQDVPTKSSN-DNFKDSGLRVENEKSSV----QKSKP 1138
C+ G +CKF+H D MDNT+ DV + ++ D GL E++++ + +
Sbjct: 254 CVNGPNCKFMHNIDSMDNTNQQIGGDVAIATRRYESQADKGLSEIPERTTLFCFPGRVRQ 313
Query: 1139 LASSESQRSRQSVDKHDKHCSLVPDDLKSDNPGSGWQHLGSASGFQCKSNNSEEYNRSLG 1318
+ ES Q KH + SL DDL + GF S Y
Sbjct: 314 WENEESLTWHQYNGKH-RFSSLQRDDL--------------SYGFPADSQRFPMYK---- 354
Query: 1319 IPLLNEIRNHHSHFMDDKRLNGEEYVRGYSSSMTNLLPEHRFLSSGSP---IPSSVYRNS 1489
+ RN+ S G + G L PE+ S GS I S Y+ S
Sbjct: 355 ----DGPRNYVS-----PNTEGSYPILG-----NRLFPEYGSFSVGSSTLAISSKTYQTS 400
Query: 1490 ----SSSLAYEKSIGEPPNLILESQSMKYVAXXXXXXXXXXXXXXXXXXXXXXXXMLGHS 1657
S + + E G+ L + ++ G+S
Sbjct: 401 RTLSSKATSLEGLAGKQNEFTLNDYASPVLSHQPNPRVDTTLQTTNLLPSHXSSAWGGYS 460
Query: 1658 PSTFYSRPEQEILSLHRSTGHHFRSTISNWEPSVPFRPS-FHISSIMSSPKNQYDPLLDS 1834
S Q+ + T + + +WEPS+PFRPS F + MSS ++ +D + D+
Sbjct: 461 FSQNAGPCVQKCVDSDTKT----KFSSDDWEPSIPFRPSYFSAFTDMSSARSVHDTVGDT 516
Query: 1835 IDPPNGGERTVWGSSVSQSATTHNTSNQQANGDP----------------ISFHQKPQYG 1966
+ G+R S +Q A+ +S+Q+ DP I H K
Sbjct: 517 CEEHPLGDRPYKVSCPTQGASILGSSHQRVYHDPVLPGTLGPEYNADIESIHIHDKFDQS 576
Query: 1967 LSENSVSSHGVDGFTTPADVTATFGAQQQNNRSLSKEENRLKSGRFLNSTNAKDVDLDHK 2146
+ V H D FT + + A+ Q +++LK G+ T +DV D
Sbjct: 577 TLDKGVYGHQRDFFTNETEPAGSSVAELQ--------DSQLKEGKPDGHTRVEDVS-DQN 627
Query: 2147 HSHQGDGGNHT-------------------------KESKALKLFRASLIEFVKELVKPY 2251
+ DG +H KESKAL+ FR LI+F+K+LV+P
Sbjct: 628 PRNYSDGASHEEELKMEWGKQSNAKCDDHKIDEDVQKESKALRHFRFVLIDFIKDLVRPT 687
Query: 2252 WREGHLSKDAHNTIVKKAVEKVLHSLQPQQIPNTTESTTEYLSASQPKLAKLVE 2413
W G LSKDAHN+IVK++V+KVL +L+P QIP+T E+ YLS SQPK+AKLV+
Sbjct: 688 WHRGQLSKDAHNSIVKRSVDKVLSTLEPHQIPSTEEAIHHYLSVSQPKIAKLVQ 741
>ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355482671|gb|AES63874.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 892
Score = 158 bits (399), Expect = 8e-36
Identities = 106/305 (34%), Positives = 155/305 (50%), Gaps = 45/305 (14%)
Frame = +2
Query: 1652 HSPSTFYSRPEQEILSLHRSTGH---HFRSTISNWEPSVPFRPSFHISSI-MSSPKNQYD 1819
H S R + ++ R H + T SNWEPSVPFRPSF I+S+ +SSP++ YD
Sbjct: 590 HKSSFSSDREDFHLVGSSRVAPHANGYTLKTRSNWEPSVPFRPSFFITSMNVSSPRDLYD 649
Query: 1820 PLLDSIDPPNGGERT------VWGSSVSQSATTHNTSNQQANG----------DPISFHQ 1951
PL +SI+ PN G+ + + GSSV S+ + A G +S H
Sbjct: 650 PLRNSIEIPNIGDGSLKASLLIRGSSVQASSQVRTYDDSAAVGKQMSDVNDDKSSVSSHH 709
Query: 1952 KPQYGLSENSVSSHGVDGFTTPADVTATFGAQQQNN---------------RSLSK---- 2074
K S G D T A++T+ A QN +L K
Sbjct: 710 KFYENEPNRSSVPRGKDCLATKAEITSGTCANYQNGDIGVGQYAFGVEDRIETLKKRTEH 769
Query: 2075 ------EENRLKSGRFLNSTNAKDVDLDHKHSHQGDGGNHTKESKALKLFRASLIEFVKE 2236
+E+ K R ++++D + G+ KE+K LK+F A L++ VKE
Sbjct: 770 DARHHSDESEHKKNRVAKDNKFHEMEVDFQTD-----GSVLKETKTLKIFHAVLVDLVKE 824
Query: 2237 LVKPYWREGHLSKDAHNTIVKKAVEKVLHSLQPQQIPNTTESTTEYLSASQPKLAKLVEG 2416
L+KP+W EG LSKDAH IVKK+V+KV+ +L+P+QIP T ++ +Y+S +PK+AKLV G
Sbjct: 825 LLKPFWHEGRLSKDAHILIVKKSVDKVISTLEPRQIPTTEDTAKQYVSLCRPKIAKLVHG 884
Query: 2417 YVGRY 2431
YV ++
Sbjct: 885 YVNKH 889
Score = 89.4 bits (220), Expect = 5e-15
Identities = 74/242 (30%), Positives = 104/242 (42%), Gaps = 4/242 (1%)
Frame = +2
Query: 527 KNKVVYEAKRSEESISGNKGATS--EPLKRTPIEACKSAQKQYGESHCGTQDHSISTFT- 697
K KV K SE IS G P + A + E C ++
Sbjct: 318 KQKVESPPKPSENLISAEDGKNQGLNVDVENPGHLQRKASEGCSEPDCNSKASLSDVMDI 377
Query: 698 GAKKTKSAFVGKKKGASEILMRDGSANKVVNRSSCSKKENKLMHMQSGENVKLKASSSLT 877
++ TK + K + I++RD N V + + K+M + V +K S
Sbjct: 378 DSRATKPSSDTGKDVVTGIILRD---NFVEDADGDQNSKEKVMQSEMESTVDVKQKPS-- 432
Query: 878 PKIRPRSLSPPIESEDGTKRPAIICDFFARGWCIKGSSCKFLHRKDGMDNTSMFSNQDVP 1057
R R SP E +DG KRPAIIC FFA+GWCI+GSSC FLH KD ++NT + DV
Sbjct: 433 ---RTRIHSPSAEIKDGNKRPAIICAFFAKGWCIRGSSCSFLHVKDSVNNTDQGAEGDVV 489
Query: 1058 TKSSNDNFK-DSGLRVENEKSSVQKSKPLASSESQRSRQSVDKHDKHCSLVPDDLKSDNP 1234
T K + G++ ENE+ + P E R S+ +K ++ S N
Sbjct: 490 TAHQKRELKLEKGVK-ENEEEASPSWHPSHEKEKFLMRDSLFPENKSAFNTSNNYFSSNL 548
Query: 1235 GS 1240
S
Sbjct: 549 SS 550