BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007348
         (947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21275.1| unknown [Picea sitchensis]                             279   6e-73
ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec...   279   6e-73
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p...   278   1e-72
ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec...   278   2e-72
gb|AFK44906.1| unknown [Medicago truncatula]                          277   3e-72

>gb|ABK21275.1| unknown [Picea sitchensis]
          Length = 177

 Score =  279 bits (714), Expect = 6e-73
 Identities = 130/151 (86%), Positives = 134/151 (88%)
 Frame = +2

Query: 2   SVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXXQP 181
           SVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENE+EG                QP
Sbjct: 26  SVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLSSKLAANSTTLQP 85

Query: 182 DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP 361
           DWQIGECVA+WWRPNFET+MYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP
Sbjct: 86  DWQIGECVAVWWRPNFETLMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP 145

Query: 362 LFELYDNVQRYGPVISTIPQQLSRFQFNMIN 454
           LFELYDNVQRYGPVISTIPQQLSRF FNM+N
Sbjct: 146 LFELYDNVQRYGPVISTIPQQLSRFTFNMVN 176


>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform 1 [Vitis vinifera]
           gi|297745235|emb|CBI40315.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  279 bits (714), Expect = 6e-73
 Identities = 132/150 (88%), Positives = 134/150 (89%)
 Frame = +2

Query: 2   SVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXXQP 181
           SVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEG                QP
Sbjct: 49  SVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQP 108

Query: 182 DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP 361
           DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVP
Sbjct: 109 DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVP 168

Query: 362 LFELYDNVQRYGPVISTIPQQLSRFQFNMI 451
           LFELYDNVQRYGPVISTIPQQLSRFQFNM+
Sbjct: 169 LFELYDNVQRYGPVISTIPQQLSRFQFNMM 198


>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 200

 Score =  278 bits (712), Expect = 1e-72
 Identities = 133/150 (88%), Positives = 133/150 (88%)
 Frame = +2

Query: 2   SVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXXQP 181
           SVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEG                 P
Sbjct: 49  SVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVP 108

Query: 182 DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP 361
           DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP
Sbjct: 109 DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP 168

Query: 362 LFELYDNVQRYGPVISTIPQQLSRFQFNMI 451
           LFELYDNVQRYGPVISTIPQQLSRFQFNMI
Sbjct: 169 LFELYDNVQRYGPVISTIPQQLSRFQFNMI 198


>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 200

 Score =  278 bits (710), Expect = 2e-72
 Identities = 131/150 (87%), Positives = 133/150 (88%)
 Frame = +2

Query: 2   SVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXXQP 181
           SVEAILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEIEG                QP
Sbjct: 49  SVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQP 108

Query: 182 DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP 361
           DWQIGECVAIWWRPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVP
Sbjct: 109 DWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVP 168

Query: 362 LFELYDNVQRYGPVISTIPQQLSRFQFNMI 451
           LFELYDNVQRYGPVISTIPQQLSRFQFNMI
Sbjct: 169 LFELYDNVQRYGPVISTIPQQLSRFQFNMI 198


>gb|AFK44906.1| unknown [Medicago truncatula]
          Length = 200

 Score =  277 bits (708), Expect = 3e-72
 Identities = 132/152 (86%), Positives = 132/152 (86%)
 Frame = +2

Query: 2   SVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXXQP 181
           SVE ILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEG                 P
Sbjct: 49  SVEGILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVP 108

Query: 182 DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP 361
           DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP
Sbjct: 109 DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP 168

Query: 362 LFELYDNVQRYGPVISTIPQQLSRFQFNMINN 457
           LFELYDNVQRYGPVISTIPQQLSRFQF MI N
Sbjct: 169 LFELYDNVQRYGPVISTIPQQLSRFQFKMITN 200