BLASTX nr result
ID: Coptis25_contig00007337
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00007337
(1455 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|2... 109 2e-21
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g... 102 3e-19
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2... 96 2e-17
ref|XP_002534512.1| conserved hypothetical protein [Ricinus comm... 94 9e-17
ref|XP_002330355.1| predicted protein [Populus trichocarpa] gi|2... 92 4e-16
>ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|222852324|gb|EEE89871.1|
predicted protein [Populus trichocarpa]
Length = 433
Score = 109 bits (273), Expect = 2e-21
Identities = 107/418 (25%), Positives = 189/418 (45%), Gaps = 58/418 (13%)
Frame = -3
Query: 1315 PHEVLVDILRRVPALSLAKFKCVSKHWCSLIHDPSFVSSN--LTLAREEGMGFIQIF--- 1151
P +V++DIL R+PA S+ +F+CVS+ WCS HDP F S + +L R+ G + +
Sbjct: 27 PDDVILDILTRLPAKSVVRFRCVSRTWCSFTHDPFFASLHHARSLTRDNGSALLLSYPDP 86
Query: 1150 -DKENCFRYYSIDQHGLAKELRLTNNMSYHNSASCNGLLCLRERASNFLRLYNPVTGETI 974
F ++ Q ++ + H S G+LC+ R S+ + + N T ETI
Sbjct: 87 SSSSTSFSFFERKQGFRNLQISHVDQQYTHLSEIIRGILCINYRRSHRVDICNITTQETI 146
Query: 973 PIPVPIPQQKRKIAGI-FNL------GLGFNPHSRKYKV--VCF-----TECRPNS---- 848
+P R AG+ F++ GFN +R YKV +C + PN+
Sbjct: 147 TLPRSTNIPIRSDAGVDFDIVYEPRYSFGFNSSTRDYKVLNICSITRYKLQVNPNNGLST 206
Query: 847 ---------LEVYTIG-SGGHNTWKSIN--YPPRFSIDHFK-KPIYANGNLCWEWNSCSP 707
E++TIG G +W+ I+ YP + + + A+G + W
Sbjct: 207 REVSQRTVEFEIFTIGCDRGAGSWRKIDPGYPYDQELHGLSCESVCADGVIHWR------ 260
Query: 706 GLRTGYTQLRMIAFNLADEQFRVIMGPNINLRHEKYWLRELGDSLSFVH--TSSYERQRV 533
+ Q ++AF+L E+F++I P L E + ++++ L + S Y R ++
Sbjct: 261 --HRFFDQEILLAFDLKQEKFQIIQVPKEAL--EFHLMKQVKGCLVLMGHVISGYNRNKI 316
Query: 532 TLWVLKDYDKQVWLKKLKFQLPFDSKLLNGFIAISNNKTLI--KSYDDGCYYLCHY-DNQ 362
LW+L+D Q+W+K+ P S L + L+ Y D + +Y D +
Sbjct: 317 VLWILEDRLNQIWMKE-NVVFPSHSTCLWPVGSFKTGLILLAQHGYADPAAWAAYYCDLE 375
Query: 361 GQLLEVIEVKEL-----------APTNYYVGYHIQSLIS-----FGSIRES*MKRYSG 236
+ L +I+V EL P++ + H ++L+S + S++E +K+++G
Sbjct: 376 TKNLCMIQVPELKSVKLPCGEAGKPSDVVLTEHAENLLSLTSNLYSSMQEEKVKQFAG 433
>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
gi|222843314|gb|EEE80861.1| f-box family protein [Populus
trichocarpa]
Length = 408
Score = 102 bits (253), Expect = 3e-19
Identities = 90/317 (28%), Positives = 139/317 (43%), Gaps = 28/317 (8%)
Frame = -3
Query: 1351 EEEQQVWDNSKFPHEVLVDILRRVPALSLAKFKCVSKHWCSLIHDPSFVSSNLTLAREEG 1172
E++ Q P E+ DIL R+P SL KFKCV + W ++ DP V+ L+ + +E
Sbjct: 17 EDDPQTTGMELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQET 76
Query: 1171 MGFIQI---FDKENCFRYYSIDQHGLAKE--LRLTNNMS-----YHNSASCNGLLCLRER 1022
+ + F N + H KE R+ S + SCNGLLCL +
Sbjct: 77 DPCVILHCDFPIRNNLYFVDFAAHEEEKEKVKRIRAPFSSMMPEFEVVGSCNGLLCLSDS 136
Query: 1021 ASN-FLRLYNPVTGETIPIPVPIPQQKRKIAGIFNLGLGFNPHSRKYKVVCFTECR---- 857
N L +YNP TG +P + +++ G GFNP + +YKV+ R
Sbjct: 137 LFNDSLYIYNPFTGRYKELPKSLQYPDQEVV----FGFGFNPKTNEYKVIRIVYYRNGHG 192
Query: 856 --PNS---------LEVYTIGSGGHNTWKSINYPPRFSIDHFKKPIYANGNLCWEWNSCS 710
P S +++ T+G G W+S+ + + NG L W C
Sbjct: 193 RYPRSRRIIYPLSQVQILTLGCPG---WRSLG-KVSYRLVRRASETLVNGRLHWVSRPC- 247
Query: 709 PGLRTGYTQLRMIAFNLADEQFRVIMGPNI-NLRHEKYWLRELGDSLSFVHTSSYERQRV 533
R+++F+L DEQFR + P+ L Y L L LS +Y R+
Sbjct: 248 ----RNKPARRLVSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLSVAVYCNY--GRL 301
Query: 532 TLWVLKDYD-KQVWLKK 485
+WV+K+Y+ K+ W+K+
Sbjct: 302 EIWVMKEYNVKESWVKE 318
>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
predicted protein [Populus trichocarpa]
Length = 408
Score = 96.3 bits (238), Expect = 2e-17
Identities = 90/307 (29%), Positives = 139/307 (45%), Gaps = 32/307 (10%)
Frame = -3
Query: 1318 FPHEVLVDILRRVPALSLAKFKCVSKHWCSLIHDPSFVSSNLTLAREEGMGFIQIFDKEN 1139
FP E+ DIL R+P SL +F+CVSK WC I P F++++L + + I
Sbjct: 4 FP-EITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDAT 62
Query: 1138 CFRYYSIDQHGLAKELRLTNN------MSYHNSASCNGLLCLRERASNF-LRLYNPVTGE 980
+D + L NN + SCNGLL L S+F + LYNP T E
Sbjct: 63 NLCTVDLDSPDFT-SIELKNNPLKSDDCATEVMGSCNGLLALLN--SDFSIALYNPSTRE 119
Query: 979 TIPIPV-----PIPQQKRKIAGIFNL-GLGFNPHSRKYKVVCFTECRPNS--------LE 842
IPV P K++ +FN G G +P + YKVV F +S ++
Sbjct: 120 KKMIPVSPLELPNDLDDSKVSSLFNFYGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVK 179
Query: 841 VYTIGSGGHNTWKSIN---YPPRFSIDHFKKP-------IYANGNLCWEWNSCSPGLRTG 692
VY++ S N+WK I+ Y RF + P ++AN + W+ G G
Sbjct: 180 VYSLKS---NSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENG 236
Query: 691 YTQLRMIAFNLADEQFRVIMGPNINLRHEKYWLRELGDSLSFVHTSSYERQRVTLWVLKD 512
+ +AF+L E+F++I P+ + + + LG L + ++V +WV+K+
Sbjct: 237 SDLI--VAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNC--KQVEIWVMKE 292
Query: 511 YD-KQVW 494
Y K+ W
Sbjct: 293 YGVKESW 299
>ref|XP_002534512.1| conserved hypothetical protein [Ricinus communis]
gi|223525141|gb|EEF27869.1| conserved hypothetical
protein [Ricinus communis]
Length = 383
Score = 94.0 bits (232), Expect = 9e-17
Identities = 84/304 (27%), Positives = 133/304 (43%), Gaps = 27/304 (8%)
Frame = -3
Query: 1315 PHEVLVDILRRVPALSLAKFKCVSKHWCSLIHDPSFVSSNLTLAREEGMGFIQIFDKEN- 1139
P E++ DIL RV SL K V + W +L DP V + + E I D
Sbjct: 15 PREIMADILSRVTTPSLFIIKFVCQSWRNLAQDPLLVDLHFSHKIENNPCLILHSDHPTK 74
Query: 1138 ------CFRYYSIDQHGLAKELRLTNNMSYHNSASCNGLLCLRERA-SNFLRLYNPVTGE 980
C ++ Q G+ ++ + + + SC G LCL + N +YNP T
Sbjct: 75 NQLYALCLYPHNTSQDGMVMKIPVPVKLEFDVVGSCKGWLCLYDSLHKNTFYMYNPFTNS 134
Query: 979 TIPIPVP-IPQQKRKIAGIFNLGLGFNPHSRKYKVVCFTECR--------------PNSL 845
+ +P+ P + LG GF+P +KYKV+ + R + +
Sbjct: 135 CMELPISNFPSDVWTV-----LGFGFDPVRKKYKVLKVSYIRRTNNTAGERYGLSLRSEV 189
Query: 844 EVYTIGSGGHNTWKSINYPPRFSIDHFKKPIYANGNLCW-EWN-SCSPGLRTGYTQLRMI 671
++ T+GS +W+S+ P + I H +Y NG L W W PG ++I
Sbjct: 190 QILTVGS---PSWRSLGETPYYPI-HSPSQVYVNGRLHWVNWPVRYRPG-------RKLI 238
Query: 670 AFNLADEQFRVIMGPNIN-LRHEKYWLRELGDSLSFVHTSSYERQRVTLWVLKDYD-KQV 497
+F+L DE+FR + P + ++ Y L + D LS +Y V WV+KDY K+
Sbjct: 239 SFDLEDEKFREVPLPGSDGIKWGDYMLVVIRDCLSAAVYRNYGSFEV--WVMKDYGLKES 296
Query: 496 WLKK 485
W+K+
Sbjct: 297 WIKE 300
>ref|XP_002330355.1| predicted protein [Populus trichocarpa] gi|222871559|gb|EEF08690.1|
predicted protein [Populus trichocarpa]
Length = 437
Score = 91.7 bits (226), Expect = 4e-16
Identities = 91/360 (25%), Positives = 159/360 (44%), Gaps = 26/360 (7%)
Frame = -3
Query: 1300 VDILRRVPALSLAKFKCVSKHWCSLIHDPSFVSSNLTLA-------------REEGMGFI 1160
+DIL R+P ++ +CV K W I D F +L + + +
Sbjct: 1 MDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLLLKTISNNPESRNLQLV 60
Query: 1159 QIFDKENCFRYYSIDQHGLAKELRLTNNMSYHNSASCNGLLCL----RERASNFLRLYNP 992
Q+ K R+ +++ + L N + SCNGLLC+ ++ + + + L NP
Sbjct: 61 QVTGKPLGLRFRVVEEMKFVPGINLPYN-DFLIENSCNGLLCISQTFQDGSHDDIYLCNP 119
Query: 991 VTGETIPIPVPIPQQKRKIAGIFNLGLGFNPHSRKYKVVCFTECRPN------SLEVYTI 830
+ GE I IP Q+ R + N LG+ +++YKV+ T C E+YTI
Sbjct: 120 ILGEYISIPPAAGQETRHQS---NFALGYCAIAKEYKVL-HTFCSKTGSYYQPEAEIYTI 175
Query: 829 GSGGHNTWKSINYPPRFSIDHFKKPIYANGNLCWEWNSCSPGLRTGYTQLRMI-AFNLAD 653
G+G W+SI ++ F + G++ WE LR + I +FN +
Sbjct: 176 GTG---KWRSIQ-KALLNLRMFIVDSFVCGSIHWE-------LRDEDDCVNSIGSFNFEN 224
Query: 652 EQF-RVIMGPNINLRHEKYWLRELGDSLSFVHTSSYERQRVTLWVLKDY-DKQVWLKKLK 479
EQF + + P + E +SF HT Y + +W++K+Y +K+ W K+
Sbjct: 225 EQFSELSLPPRYDEGDVTLTAFEGCLGVSFFHT--YSDPQYEIWIMKEYGNKESWTKQFT 282
Query: 478 FQLPFDSKLLNGFIAISNNKTLIKSYDDGCYYLCHYDNQGQLLEVIEVKELAPTNYYVGY 299
+ +KL + I ++N L+ Y + + +C YD + + +E+I + + NY Y
Sbjct: 283 VKNLGFAKLYDPLIFLNNGLILMMQYRE--FVVC-YDTRRKFMEIIRIWQTQGNNYATAY 339