BLASTX nr result

ID: Coptis25_contig00007330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007330
         (1730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263...   254   4e-65
ref|XP_004136109.1| PREDICTED: uncharacterized protein LOC101208...   221   4e-55
ref|XP_004166690.1| PREDICTED: uncharacterized protein LOC101228...   210   8e-52
emb|CBI32173.3| unnamed protein product [Vitis vinifera]              205   3e-50
ref|XP_002512156.1| DNA binding protein, putative [Ricinus commu...   205   3e-50

>ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263099 [Vitis vinifera]
            gi|147768907|emb|CAN75881.1| hypothetical protein
            VITISV_024454 [Vitis vinifera]
          Length = 686

 Score =  254 bits (650), Expect = 4e-65
 Identities = 184/497 (37%), Positives = 246/497 (49%), Gaps = 13/497 (2%)
 Frame = +1

Query: 4    EPVGNVSKPAGEDSCNGSSETIGKNTNSAVSQALKLEPIQKRETRESTELWESFAESKEV 183
            +PV + SKP GEDS NGSSE                 P + ++  +S+EL ES A SK+ 
Sbjct: 245  DPVSSDSKPVGEDSYNGSSE-----------------PNRAKKADDSSELRESAAHSKDG 287

Query: 184  VMKENSDVQSSASLSHRRKK--------DXXXXXXXXXXISPAMKRLSVKSQPLVKIFEI 339
              KE+SDVQSSASL+ +RK+                   +SPA KR+ VKSQPLV   EI
Sbjct: 288  T-KESSDVQSSASLTRKRKRRRKKEISGSSSGDEPETEAVSPATKRICVKSQPLVSFLEI 346

Query: 340  IKGHKYGSVFERRLESQETPKYKNLIRQHLDLETVSKRLNEGKYSGSSRKFFRDLLLLIN 519
            I+ HK+ S+FERRLE+QET  YK+++RQH+DLE++  +L++G YS S R F+RDLLLL  
Sbjct: 347  IRSHKHSSLFERRLETQETEVYKSIVRQHVDLESIQTKLDDGTYSSSPRAFYRDLLLLFT 406

Query: 520  NAIVFFSPNSVEFTAAIELRQIVSKEMGTRIRKXXXXXXXXXXXXXXXXXXXXXXXXXXX 699
            NAIVFF   S E  AA ELR +V  E    +RK                           
Sbjct: 407  NAIVFFPKASAEALAAGELRAMVLNE----VRK-------QQPPAPEHLLLPQPKPELER 455

Query: 700  XXSLLVKPKITIPMIACRKRTPVSTKASI----VVSERKKEAVVVDEKKPVFAHPVEEQI 867
              SLL K K + P+I CRKR+ +S KAS         R +E   VD K  V     EEQ 
Sbjct: 456  SDSLLAKQKSSAPIIVCRKRSSISAKASSFGVKAGESRSEEKPAVDIKPSV----REEQS 511

Query: 868  VINKGKRERPASGTRSSRTAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGLAVDDNS 1047
            ++  G +E+  +G RS R  GK                                   D  
Sbjct: 512  LVKAGTKEKSTTGVRSLRRGGK----------------NRSGNLNKNQSTSTNHGSSDKG 555

Query: 1048 ETKTDKEKKNGVTSVAKKRSVANFLNRMKRNTSSNGAXXXXXXXXXXXXXXXXXXXAEPK 1227
            ET   ++KK   ++ AKKR  A+FL R+K+N+  +                      E K
Sbjct: 556  ETPKAEKKKADASASAKKRGAADFLKRIKKNSPMD----MGKSTVNDTRSGRGGGGGEEK 611

Query: 1228 RGSGGRGDARKEQPTRQSSSRKQAREQSSPAKRGVGRPPKRHASSPITPPSTSKRARES- 1404
            R    +GD R+++  RQS   KQ +++SSP+KR VGRPPK+ A+       T KR RES 
Sbjct: 612  RKRNEKGDGRRDRVLRQSGGGKQGKDESSPSKRSVGRPPKKAAA------DTGKRGRESG 665

Query: 1405 TEKEVAASRQPRKRSRR 1455
             EKE A +    KR+R+
Sbjct: 666  GEKEAAPAASSSKRARK 682


>ref|XP_004136109.1| PREDICTED: uncharacterized protein LOC101208443 [Cucumis sativus]
          Length = 703

 Score =  221 bits (564), Expect = 4e-55
 Identities = 161/494 (32%), Positives = 245/494 (49%), Gaps = 16/494 (3%)
 Frame = +1

Query: 22   SKPAGEDSCNGSSETIGKNTNSAVSQALKLEPIQKRETRESTELWESFAESKE--VVMKE 195
            S+PAG  S +GS++T+ KN    +S+  K E    +   +S+EL +S A+S       +E
Sbjct: 232  SEPAGPQSDDGSTDTVVKNPTCDISETKKKET---QRVDDSSELADSEAQSHGGGTTTRE 288

Query: 196  NSDVQSSASLSHRRKKDXXXXXXXXXXISPAMKRLSV--KSQPLVKIFEIIKGHKYGSVF 369
            +S+VQSSASL+ R K             S    R SV  KS+   ++ ++I+ HK+GS+F
Sbjct: 289  SSEVQSSASLTGRMKSKRLLRKEISGGSSGNEPRRSVGIKSRRFDEVLQLIRAHKHGSLF 348

Query: 370  ERRLESQETPKYKNLIRQHLDLETVSKRLNEGKYSGSSRKFFRDLLLLINNAIVFFSPNS 549
            E RL+SQET +YK ++RQHLDLE V  ++  G YS S+  F+RDLLLL NN + FF  +S
Sbjct: 349  ESRLQSQETEEYKGMVRQHLDLEIVQSKITSGSYSSSNLAFYRDLLLLFNNVVTFFPKSS 408

Query: 550  VEFTAAIELRQIVSKEMGTRIRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLVKPKI 729
             E  AA ELR ++S EM   +R                              SLL K K 
Sbjct: 409  KEAVAACELRLLISNEMKKSLRIAQTDPLPEVVDSSPTIPSRSKGPDLEGSQSLLAKQKS 468

Query: 730  TIPMIACRKRTPVSTKASIVVSERKKEAVVVDEKKP---------VFAHPVEEQIVINKG 882
            ++P++ CRKR+ +S  ++  V E+ + +   D++KP           ++ VE++      
Sbjct: 469  SVPIVVCRKRSKISNPSTTGVGEKGERS--NDDEKPAADLKSSIKTASNLVEDEDTTKDS 526

Query: 883  K-RERPASGTRSSRTAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGLAVDDNSETKT 1059
            K +E+P +G RS R +                                  +  + +E  T
Sbjct: 527  KVKEKPTTGARSMRRSNDSATNSSGPSSSKKQNITSRWKP----------SSANETEIPT 576

Query: 1060 DKEKKNGVTSVAKKRSVANFLNRMKRNTSSNGAXXXXXXXXXXXXXXXXXXXAEPKRGS- 1236
              +KK+   ++ KKRS A+FL R+K+N+    A                    E K+GS 
Sbjct: 577  PDKKKSETVALEKKRSAADFLKRIKQNSP---AETTKRNGRGGSSGGVSNATPEQKKGSS 633

Query: 1237 -GGRGDARKEQPTRQSSSRKQAREQSSPAKRGVGRPPKRHASSPITPPSTSKRARESTEK 1413
               +G  R     +QS+ RK+ +E +SP+KR VGRPPK+ A +   PP+  KRARE   K
Sbjct: 634  KNEKGKERVSTTMKQSNDRKRPKEDASPSKRSVGRPPKKAAEA--EPPTPIKRAREGGGK 691

Query: 1414 EVAASRQPRKRSRR 1455
            E    ++PRK+S+R
Sbjct: 692  E--PLKRPRKKSKR 703


>ref|XP_004166690.1| PREDICTED: uncharacterized protein LOC101228284 [Cucumis sativus]
          Length = 688

 Score =  210 bits (535), Expect = 8e-52
 Identities = 154/492 (31%), Positives = 235/492 (47%), Gaps = 14/492 (2%)
 Frame = +1

Query: 22   SKPAGEDSCNGSSETIGKNTNSAVSQALKLEPIQKRETRESTELWESFAESKEVVMKENS 201
            S+PAG  S +GS++T+ KN    +S+  K                +  +       +E+S
Sbjct: 232  SEPAGPQSDDGSTDTVVKNPTCDISETKK----------------KGNSHGGGTTTRESS 275

Query: 202  DVQSSASLSHRRKKDXXXXXXXXXXISPAMKRLSV--KSQPLVKIFEIIKGHKYGSVFER 375
            +VQSSASL+ R K             S    R SV  KS+   ++ ++I+ HK+GS+FE 
Sbjct: 276  EVQSSASLTGRMKSKRLLRKEISGGSSGNEPRRSVGIKSRRFDEVLQLIRAHKHGSLFES 335

Query: 376  RLESQETPKYKNLIRQHLDLETVSKRLNEGKYSGSSRKFFRDLLLLINNAIVFFSPNSVE 555
            RL+SQET +YK ++RQHLDLE V  ++  G YS S+  F+RDLLLL NN + FF  +S E
Sbjct: 336  RLQSQETEEYKGMVRQHLDLEIVQSKITSGSYSSSNLAFYRDLLLLFNNMVTFFPKSSKE 395

Query: 556  FTAAIELRQIVSKEMGTRIRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLVKPKITI 735
              AA ELR ++S EM   +R                              SLL K K ++
Sbjct: 396  AVAACELRLLISNEMKKSLRIAQTDPLPEVVDSSPTIPSRSKGPDLEGSQSLLAKQKSSV 455

Query: 736  PMIACRKRTPVSTKASIVVSERKKEAVVVDEKKP---------VFAHPVEEQIVINKGK- 885
            P++ CRKR+ +S  ++  V E+ + +   D++KP           ++ VE++      K 
Sbjct: 456  PIVVCRKRSKISNPSTTGVGEKGERS--NDDEKPAADLKSSIKTASNLVEDEDTTKDSKV 513

Query: 886  RERPASGTRSSRTAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGLAVDDNSETKTDK 1065
            +E+P +G RS R +                                  +  + +E  T  
Sbjct: 514  KEKPTTGARSMRRSNDSATNSSGPSSSKKQNITSRWKP----------SSANETEIPTPD 563

Query: 1066 EKKNGVTSVAKKRSVANFLNRMKRNTSSNGAXXXXXXXXXXXXXXXXXXXAEPKRGS--G 1239
            +KK+   ++ KKRS A+FL R+K+N+    A                    E K+GS   
Sbjct: 564  KKKSETVALEKKRSAADFLKRIKQNSP---AETTKRNGRGGSSGGVSNATPEQKKGSSKN 620

Query: 1240 GRGDARKEQPTRQSSSRKQAREQSSPAKRGVGRPPKRHASSPITPPSTSKRARESTEKEV 1419
             +G  R     +QS+ RK+ +E +SP+KR VGRPPK+ A +   PP+  KRARE   KE 
Sbjct: 621  DKGKERVSTTMKQSNDRKRPKEDASPSKRSVGRPPKKAAEA--EPPTPIKRAREGGGKE- 677

Query: 1420 AASRQPRKRSRR 1455
               ++PRK+S+R
Sbjct: 678  -PLKRPRKKSKR 688


>emb|CBI32173.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  205 bits (522), Expect = 3e-50
 Identities = 140/379 (36%), Positives = 187/379 (49%), Gaps = 4/379 (1%)
 Frame = +1

Query: 277  ISPAMKRLSVKSQPLVKIFEIIKGHKYGSVFERRLESQETPKYKNLIRQHLDLETVSKRL 456
            +SPA KR+ VKSQPLV   EII+ HK+ S+FERRLE+QET  YK+++RQH+DLE++  +L
Sbjct: 234  VSPATKRICVKSQPLVSFLEIIRSHKHSSLFERRLETQETEVYKSIVRQHVDLESIQTKL 293

Query: 457  NEGKYSGSSRKFFRDLLLLINNAIVFFSPNSVEFTAAIELRQIVSKEMGTRIRKXXXXXX 636
            ++G YS S R F+RDLLLL  NAIVFF   S E  AA ELR +V  E    +RK      
Sbjct: 294  DDGTYSSSPRAFYRDLLLLFTNAIVFFPKASAEALAAGELRAMVLNE----VRK------ 343

Query: 637  XXXXXXXXXXXXXXXXXXXXXXXSLLVKPKITIPMIACRKRTPVSTKASI----VVSERK 804
                                   SLL K K + P+I CRKR+ +S KAS         R 
Sbjct: 344  -QQPPAPEHLLLPQPKPELERSDSLLAKQKSSAPIIVCRKRSSISAKASSFGVKAGESRS 402

Query: 805  KEAVVVDEKKPVFAHPVEEQIVINKGKRERPASGTRSSRTAGKXXXXXXXXXXXXXXXXX 984
            +E   VD K  V     EEQ ++  G +E+  +G RS R  GK                 
Sbjct: 403  EEKPAVDIKPSV----REEQSLVKAGTKEKSTTGVRSLRRGGK----------------N 442

Query: 985  XXXXXXXXXXXGKGLAVDDNSETKTDKEKKNGVTSVAKKRSVANFLNRMKRNTSSNGAXX 1164
                              D  ET   ++KK   ++ AKKR  A+FL R+K+N+  +    
Sbjct: 443  RSGNLNKNQSTSTNHGSSDKGETPKAEKKKADASASAKKRGAADFLKRIKKNSPMD---- 498

Query: 1165 XXXXXXXXXXXXXXXXXAEPKRGSGGRGDARKEQPTRQSSSRKQAREQSSPAKRGVGRPP 1344
                              E KR    +GD R+++  RQS   KQ +++SSP+KR VGRPP
Sbjct: 499  MGKSTVNDTRSGRGGGGGEEKRKRNEKGDGRRDRVLRQSGGGKQGKDESSPSKRSVGRPP 558

Query: 1345 KRHASSPITPPSTSKRARE 1401
            K+ A+       T KR RE
Sbjct: 559  KKAAA------DTGKRGRE 571


>ref|XP_002512156.1| DNA binding protein, putative [Ricinus communis]
            gi|223548700|gb|EEF50190.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 641

 Score =  205 bits (521), Expect = 3e-50
 Identities = 163/485 (33%), Positives = 236/485 (48%), Gaps = 14/485 (2%)
 Frame = +1

Query: 43   SCNGSSETIGKNTNSAVSQALKLE----PIQKRETRESTELWESFAESKEVVMKENSDVQ 210
            S N S+ T  +     V++    E    P+    + +S E  E  A+S   V + +S+VQ
Sbjct: 192  SVNESNSTGSEGEKKGVAKPSVQEDEEAPVLSGSSSKSVESHE-LADS---VTQLSSEVQ 247

Query: 211  SSASLSHRRKKDXXXXXXXXXXISPAMK-RLSVKSQPLVKIFEIIKGHKYGSVFERRLES 387
            SSASL  +RK+               +K R+ VKS+PL+ + E I+ H + S+FE  L++
Sbjct: 248  SSASLGGKRKRKGRKRREEIAAGGDGIKGRMMVKSEPLIALLESIRAHNHASLFEGPLKT 307

Query: 388  QETPKYKNLIRQHLDLETVSKRLNEGKYSGSSRKFFRDLLLLINNAIVFFSPNSVEFTAA 567
            QET  YKN+IRQHLDLET+  +L +G YS S+   +RDLLLL NNAIVFFS +S E TAA
Sbjct: 308  QETDVYKNMIRQHLDLETIQTKLEQGSYSSSNLLCYRDLLLLFNNAIVFFSKSSNESTAA 367

Query: 568  IELRQIVSKEMGTRIRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLVKPKITIPMIA 747
             ELR +VS +M   I+K                             SLL K K + P++ 
Sbjct: 368  YELRSVVSNQMKKEIQK-------PEFTAVPQEIPPQPKSELQKSDSLLAKHKASAPIVV 420

Query: 748  CRKRTPVSTKASIVVSERKKE--------AVVVDEKKPVFAH-PVEEQIVINKGKRERPA 900
            CRKR+ ++ K S     +K E          + D + P  +  PV EQ ++    +E+P 
Sbjct: 421  CRKRSSLTAKPSPSSFGQKTEQQQPQQQQQQINDNEPPSDSKPPVVEQSLLKIEAKEKPV 480

Query: 901  SGTRSSRTAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGLAVDDNSETKTDKEKKNG 1080
            +GTRSSR + K                               +   D  ET   ++KK  
Sbjct: 481  TGTRSSRRSNKNLAKGTTTPSKKQNASPTTK-----------VDTVDRPETPKTEKKKTE 529

Query: 1081 VTSVAKKRSVANFLNRMKRNTSSNGAXXXXXXXXXXXXXXXXXXXAEPKRGSGGRGDARK 1260
            V ++ KKRS A+FL R+K+N+    A                      K  + G+G+  K
Sbjct: 530  VLALDKKRSAADFLKRIKKNSPVETAKKNTRGSVNGGMEW-------KKDNNTGKGEKGK 582

Query: 1261 EQPTRQSSSRKQAREQSSPAKRGVGRPPKRHASSPITPPSTSKRARESTEKEVAASRQPR 1440
            E+  R++   KQ  E+SSP+KR VGRP K+   S      + KR RE+  KE  A+++P+
Sbjct: 583  ERVLRKNGDEKQV-EESSPSKRNVGRPSKK---SVEVSKVSGKRGRENVGKE--AAKRPK 636

Query: 1441 KRSRR 1455
            KRSRR
Sbjct: 637  KRSRR 641


Top