BLASTX nr result

ID: Coptis25_contig00007318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007318
         (1373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278255.1| PREDICTED: actin-related protein 7 [Vitis vi...   612   e-173
ref|XP_004135936.1| PREDICTED: actin-related protein 7-like [Cuc...   587   e-165
ref|XP_003535837.1| PREDICTED: actin-related protein 7-like [Gly...   586   e-165
ref|XP_003546890.1| PREDICTED: actin-related protein 7-like isof...   585   e-165
ref|XP_002517819.1| Actin, putative [Ricinus communis] gi|223543...   579   e-163

>ref|XP_002278255.1| PREDICTED: actin-related protein 7 [Vitis vinifera]
            gi|297736268|emb|CBI24906.3| unnamed protein product
            [Vitis vinifera]
          Length = 361

 Score =  612 bits (1579), Expect = e-173
 Identities = 303/361 (83%), Positives = 332/361 (91%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1311 MEAVVIDAGSRLLKAGFAVPDQAPTMIIPTQMQRTLEDG-LSDNTSVEEIFVDPVVRGFI 1135
            MEAVV+DAGS+LLKAGFAVPDQAP+MIIPTQM+RTLEDG L+D++  E+I VDPVVRGFI
Sbjct: 1    MEAVVVDAGSKLLKAGFAVPDQAPSMIIPTQMKRTLEDGPLTDSSLFEDITVDPVVRGFI 60

Query: 1134 KDWDAMEDLLSHVLYTGLGWEIGNEGQILFTDPLSTPKAVRERLVQLMFETFNVSGFYAS 955
            +DWDAMEDLL+HVLYTGLGWE+GNEGQILFTDPLSTPKA RE+LVQLMFETFN+SGFYAS
Sbjct: 61   RDWDAMEDLLNHVLYTGLGWEMGNEGQILFTDPLSTPKAFREQLVQLMFETFNISGFYAS 120

Query: 954  EQAVLSLYAVGRISGCTVDIGHGKIDIAPVYEGAVQHIASKRFEIGGIDLTNLLARELQS 775
            EQAVLSLYAVGRISGCTVDIGHGKIDIAPV EGAVQHIAS+RFEIGG+DLT LLA+EL  
Sbjct: 121  EQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEIGGVDLTKLLAQELGK 180

Query: 774  SNPLANLSTSDVEILKEQYACCAEDPADFEETISSCQTEQHTLPDGQVITIGRERYVVGE 595
            SNP  NL+ +DVE LKEQY+CCAED   +E+   SCQ EQHTLPDGQVI IGRERY VGE
Sbjct: 181  SNPTVNLNITDVERLKEQYSCCAEDELAYEKIQRSCQREQHTLPDGQVINIGRERYTVGE 240

Query: 594  ALFQPSILGLEEHGIVEQLVRSISSVSSENHRQLLENTVLCGGTASMIGFEERFQKESNL 415
            ALFQPSILGLE HGIVEQLVRSIS+VSSENHRQLLENTVLCGGTASM GFE+RFQKE++L
Sbjct: 241  ALFQPSILGLEAHGIVEQLVRSISTVSSENHRQLLENTVLCGGTASMGGFEDRFQKEASL 300

Query: 414  CSSSIRPCLVKAPEYMPENMTKNSAWMGGAILAKVVFPQNQHVTKADYDETGPSIVHRKC 235
            CSS+IRP LVK PEYMPEN+T  SAW+GGAILAKVVFPQNQH+TK DYDETGPSIVHRKC
Sbjct: 301  CSSAIRPSLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHITKGDYDETGPSIVHRKC 360

Query: 234  F 232
            F
Sbjct: 361  F 361


>ref|XP_004135936.1| PREDICTED: actin-related protein 7-like [Cucumis sativus]
            gi|449488840|ref|XP_004158188.1| PREDICTED: actin-related
            protein 7-like [Cucumis sativus]
          Length = 361

 Score =  587 bits (1513), Expect = e-165
 Identities = 286/361 (79%), Positives = 323/361 (89%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1311 MEAVVIDAGSRLLKAGFAVPDQAPTMIIPTQMQRTLED-GLSDNTSVEEIFVDPVVRGFI 1135
            MEA V+D GS+LLKAG A+PDQAP+MIIPT M+R  ED  +++N+  E++ VDPVVRGFI
Sbjct: 1    MEAAVVDPGSKLLKAGPAIPDQAPSMIIPTHMKRMPEDESVTENSQFEDVTVDPVVRGFI 60

Query: 1134 KDWDAMEDLLSHVLYTGLGWEIGNEGQILFTDPLSTPKAVRERLVQLMFETFNVSGFYAS 955
            KDWDAMEDLL HVLYTGLGWEIGNEGQILFTDPLSTPKA+RE+LVQLMFETFN+SGFYAS
Sbjct: 61   KDWDAMEDLLHHVLYTGLGWEIGNEGQILFTDPLSTPKAIREQLVQLMFETFNISGFYAS 120

Query: 954  EQAVLSLYAVGRISGCTVDIGHGKIDIAPVYEGAVQHIASKRFEIGGIDLTNLLARELQS 775
            EQAVLSLYAVGRISGCTVDIGHGKIDIAPV EGAV HIAS+R EIGGIDLT LLA+EL  
Sbjct: 121  EQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVHHIASRRIEIGGIDLTRLLAQELGK 180

Query: 774  SNPLANLSTSDVEILKEQYACCAEDPADFEETISSCQTEQHTLPDGQVITIGRERYVVGE 595
            S+P+ N+ST+DVE +KE YACCAED   + +   SCQ E HTLPDGQVIT+GRERY VGE
Sbjct: 181  SHPMVNISTADVEKIKELYACCAEDELAYSKIGDSCQLETHTLPDGQVITVGRERYTVGE 240

Query: 594  ALFQPSILGLEEHGIVEQLVRSISSVSSENHRQLLENTVLCGGTASMIGFEERFQKESNL 415
            ALFQP ILGL+ HGIVEQLVR+IS+VSS+NHRQLLENTVLCGGT+SM GFEERFQKE++L
Sbjct: 241  ALFQPQILGLDTHGIVEQLVRTISTVSSDNHRQLLENTVLCGGTSSMTGFEERFQKEASL 300

Query: 414  CSSSIRPCLVKAPEYMPENMTKNSAWMGGAILAKVVFPQNQHVTKADYDETGPSIVHRKC 235
            CSS++RP LVKAPEYMPEN++  SAW+GGAILAKVVFPQNQH+TKADYDE GPSIVHRKC
Sbjct: 301  CSSAVRPALVKAPEYMPENLSLYSAWIGGAILAKVVFPQNQHITKADYDENGPSIVHRKC 360

Query: 234  F 232
            F
Sbjct: 361  F 361


>ref|XP_003535837.1| PREDICTED: actin-related protein 7-like [Glycine max]
          Length = 361

 Score =  586 bits (1511), Expect = e-165
 Identities = 285/361 (78%), Positives = 320/361 (88%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1311 MEAVVIDAGSRLLKAGFAVPDQAPTMIIPTQMQRTLEDG-LSDNTSVEEIFVDPVVRGFI 1135
            MEA V+D GS LLKAGFA+PDQAP MIIPTQM+R L+DG ++DN +V+++ VDPV RG++
Sbjct: 1    MEAAVVDPGSSLLKAGFAIPDQAPAMIIPTQMKRMLDDGSMTDNPAVDDVAVDPVCRGYV 60

Query: 1134 KDWDAMEDLLSHVLYTGLGWEIGNEGQILFTDPLSTPKAVRERLVQLMFETFNVSGFYAS 955
             DWDAMEDLL +VLYTG GWE+GNEGQILFTDPL TPKA +E+LVQLMFETFN+SGFYAS
Sbjct: 61   SDWDAMEDLLHYVLYTGFGWEMGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYAS 120

Query: 954  EQAVLSLYAVGRISGCTVDIGHGKIDIAPVYEGAVQHIASKRFEIGGIDLTNLLARELQS 775
            EQAVLSLYAVGRISGCTVDIGHGKIDIAPV EGAV HIAS+RFE GGIDLTN LA+EL  
Sbjct: 121  EQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVNHIASRRFEFGGIDLTNFLAQELGK 180

Query: 774  SNPLANLSTSDVEILKEQYACCAEDPADFEETISSCQTEQHTLPDGQVITIGRERYVVGE 595
            SNPL N+S SDVE +K+QY+CC ED   +++T  SC  E HTLPDGQVITIGRERY VGE
Sbjct: 181  SNPLVNISISDVENIKQQYSCCVEDELAYQKTQGSCPVETHTLPDGQVITIGRERYTVGE 240

Query: 594  ALFQPSILGLEEHGIVEQLVRSISSVSSENHRQLLENTVLCGGTASMIGFEERFQKESNL 415
            ALFQP +LGLE HGIVEQLV +IS+VSSENHRQLLENTV+CGGT+SM GFEERFQKES+L
Sbjct: 241  ALFQPCLLGLEAHGIVEQLVHAISTVSSENHRQLLENTVVCGGTSSMTGFEERFQKESSL 300

Query: 414  CSSSIRPCLVKAPEYMPENMTKNSAWMGGAILAKVVFPQNQHVTKADYDETGPSIVHRKC 235
             SS+IRP LVK PEYMPEN+T NSAW+GGAILAKVVFPQNQHVTKADYDETGPSIVHRKC
Sbjct: 301  SSSAIRPTLVKPPEYMPENLTMNSAWVGGAILAKVVFPQNQHVTKADYDETGPSIVHRKC 360

Query: 234  F 232
            F
Sbjct: 361  F 361


>ref|XP_003546890.1| PREDICTED: actin-related protein 7-like isoform 1 [Glycine max]
          Length = 361

 Score =  585 bits (1509), Expect = e-165
 Identities = 284/361 (78%), Positives = 322/361 (89%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1311 MEAVVIDAGSRLLKAGFAVPDQAPTMIIPTQMQRTLEDG-LSDNTSVEEIFVDPVVRGFI 1135
            MEA V+D GS LLKAGFA+PDQAP MIIPTQM+R L+DG ++DN + ++I VDPV RG++
Sbjct: 1    MEAAVVDPGSSLLKAGFAIPDQAPAMIIPTQMKRMLDDGSMTDNLTFDDIAVDPVCRGYV 60

Query: 1134 KDWDAMEDLLSHVLYTGLGWEIGNEGQILFTDPLSTPKAVRERLVQLMFETFNVSGFYAS 955
            +DWDA+EDLL +VLYTGLGWE+GNEGQILFTDPL TPKA +E+LVQLMFETFN+SGFYAS
Sbjct: 61   RDWDALEDLLHYVLYTGLGWEMGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYAS 120

Query: 954  EQAVLSLYAVGRISGCTVDIGHGKIDIAPVYEGAVQHIASKRFEIGGIDLTNLLARELQS 775
            EQAVLSLYAVGRISGCTVDIGHGKIDIAPV EGAV HIAS+RFE GG+DLTN LA+EL  
Sbjct: 121  EQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVNHIASRRFEFGGVDLTNFLAQELGK 180

Query: 774  SNPLANLSTSDVEILKEQYACCAEDPADFEETISSCQTEQHTLPDGQVITIGRERYVVGE 595
            SNPL N+S SDVE +K+QY+CCAED   +++T  SC  E HTLPDGQVITIGRERY VGE
Sbjct: 181  SNPLVNISISDVEKIKQQYSCCAEDELAYQKTKGSCPVETHTLPDGQVITIGRERYTVGE 240

Query: 594  ALFQPSILGLEEHGIVEQLVRSISSVSSENHRQLLENTVLCGGTASMIGFEERFQKESNL 415
            ALFQP +LGLE HGIVEQLVR+IS+VSS+NHRQLLENTV+CGGT+SM GFEERFQKES+ 
Sbjct: 241  ALFQPCLLGLEAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGTSSMTGFEERFQKESSQ 300

Query: 414  CSSSIRPCLVKAPEYMPENMTKNSAWMGGAILAKVVFPQNQHVTKADYDETGPSIVHRKC 235
             SS+IRP LVK PEYMPEN+T NSAW+GGAILAKVVFPQNQHVTKADYDETGPSIVHRKC
Sbjct: 301  SSSAIRPTLVKPPEYMPENLTMNSAWVGGAILAKVVFPQNQHVTKADYDETGPSIVHRKC 360

Query: 234  F 232
            F
Sbjct: 361  F 361


>ref|XP_002517819.1| Actin, putative [Ricinus communis] gi|223543091|gb|EEF44626.1| Actin,
            putative [Ricinus communis]
          Length = 360

 Score =  579 bits (1493), Expect = e-163
 Identities = 285/360 (79%), Positives = 319/360 (88%)
 Frame = -3

Query: 1311 MEAVVIDAGSRLLKAGFAVPDQAPTMIIPTQMQRTLEDGLSDNTSVEEIFVDPVVRGFIK 1132
            MEA VIDAGS+LLKAG AVPDQAP +IIPTQM++ LEDG S + S E++ VDPVVRGFI+
Sbjct: 1    MEAAVIDAGSKLLKAGTAVPDQAPPIIIPTQMKQMLEDGSSGDNSFEDVNVDPVVRGFIR 60

Query: 1131 DWDAMEDLLSHVLYTGLGWEIGNEGQILFTDPLSTPKAVRERLVQLMFETFNVSGFYASE 952
            DWDAMEDL+ +VLYTGL WE GNEGQILFTDPL TPK+VRE+LVQLMFETFNVSGFYASE
Sbjct: 61   DWDAMEDLMQYVLYTGLEWEEGNEGQILFTDPLCTPKSVREQLVQLMFETFNVSGFYASE 120

Query: 951  QAVLSLYAVGRISGCTVDIGHGKIDIAPVYEGAVQHIASKRFEIGGIDLTNLLARELQSS 772
            QAVLSLYA+GRISGCTVDIGHGKIDIAPV EGAVQHIAS+R+EIGGIDLT LL +EL  S
Sbjct: 121  QAVLSLYAIGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRYEIGGIDLTKLLVQELGKS 180

Query: 771  NPLANLSTSDVEILKEQYACCAEDPADFEETISSCQTEQHTLPDGQVITIGRERYVVGEA 592
            NP  NL+ SDVEI+KE+Y+CCAED   +E+   S +TE+HTLPDGQVI IGRERY VGEA
Sbjct: 181  NPSVNLNVSDVEIIKEKYSCCAEDEVAYEKIQQSSETEEHTLPDGQVIQIGRERYTVGEA 240

Query: 591  LFQPSILGLEEHGIVEQLVRSISSVSSENHRQLLENTVLCGGTASMIGFEERFQKESNLC 412
            LFQPSILGLE HGIVEQLVR+IS+VSSEN RQLLENTVLCGG  SM GFE+RFQKE+NLC
Sbjct: 241  LFQPSILGLEAHGIVEQLVRTISTVSSENQRQLLENTVLCGGITSMPGFEDRFQKEANLC 300

Query: 411  SSSIRPCLVKAPEYMPENMTKNSAWMGGAILAKVVFPQNQHVTKADYDETGPSIVHRKCF 232
            SS+IRP LVK PEYMP  +T+ SAW+GGAILAKVVFPQNQHVTK+DYDE GPS+VHRKCF
Sbjct: 301  SSAIRPSLVKPPEYMPAELTQYSAWVGGAILAKVVFPQNQHVTKSDYDEAGPSVVHRKCF 360


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