BLASTX nr result

ID: Coptis25_contig00007314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007314
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267072.1| PREDICTED: metal transporter Nramp5 [Vitis v...    73   2e-11
ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis v...    72   5e-11
emb|CBI18987.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002284550.1| PREDICTED: metal transporter Nramp5-like [Vi...    71   8e-11
emb|CAN63972.1| hypothetical protein VITISV_004328 [Vitis vinifera]    71   8e-11

>ref|XP_002267072.1| PREDICTED: metal transporter Nramp5 [Vitis vinifera]
           gi|296090520|emb|CBI40851.3| unnamed protein product
           [Vitis vinifera]
          Length = 510

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/105 (35%), Positives = 57/105 (54%)
 Frame = +3

Query: 3   FTSSETKMGHHKNSLKVAILSWVLGFCLIGVNMYFLGGSILNWLVSDHIPKAGSIXXXXX 182
           FTSS+ KMG H++S+ V +LSW+LGF  IG+N+YFL  S++ W+ ++ IPK GSI     
Sbjct: 384 FTSSKAKMGAHRSSIMVTLLSWLLGFGSIGINIYFLSSSLIGWMTNNDIPKTGSI----- 438

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXIVYMGMLIYLTLRKENA 317
                                       ++Y  ML+YLT ++E++
Sbjct: 439 ------------------LAGVVIFPVMMLYAAMLVYLTTKRESS 465


>ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis vinifera]
           gi|302141782|emb|CBI18985.3| unnamed protein product
           [Vitis vinifera]
          Length = 542

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 27/55 (49%), Positives = 44/55 (80%)
 Frame = +3

Query: 3   FTSSETKMGHHKNSLKVAILSWVLGFCLIGVNMYFLGGSILNWLVSDHIPKAGSI 167
           F+SS TKMG HKNS+ + ++SW+LGF +IG+N+Y+L  S + WL+ +++PK G++
Sbjct: 415 FSSSNTKMGPHKNSIYIIVISWILGFGIIGINIYYLSTSFVGWLLHNNLPKVGNV 469


>emb|CBI18987.3| unnamed protein product [Vitis vinifera]
          Length = 535

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 28/55 (50%), Positives = 42/55 (76%)
 Frame = +3

Query: 3   FTSSETKMGHHKNSLKVAILSWVLGFCLIGVNMYFLGGSILNWLVSDHIPKAGSI 167
           F+SS TKMG HKNS+ V + SW+LGF L+G+N+Y+L    +NWL+ + +PK G++
Sbjct: 394 FSSSSTKMGPHKNSIYVIVFSWILGFGLMGINIYYLATGFVNWLLHNDLPKVGNV 448


>ref|XP_002284550.1| PREDICTED: metal transporter Nramp5-like [Vitis vinifera]
          Length = 544

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 28/55 (50%), Positives = 42/55 (76%)
 Frame = +3

Query: 3   FTSSETKMGHHKNSLKVAILSWVLGFCLIGVNMYFLGGSILNWLVSDHIPKAGSI 167
           F+SS TKMG HKNS+ V + SW+LGF L+G+N+Y+L    +NWL+ + +PK G++
Sbjct: 401 FSSSSTKMGPHKNSIYVIVFSWILGFGLMGINIYYLATGFVNWLLHNDLPKVGNV 455


>emb|CAN63972.1| hypothetical protein VITISV_004328 [Vitis vinifera]
          Length = 332

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 28/55 (50%), Positives = 42/55 (76%)
 Frame = +3

Query: 3   FTSSETKMGHHKNSLKVAILSWVLGFCLIGVNMYFLGGSILNWLVSDHIPKAGSI 167
           F+SS TKMG HKNS+ V + SW+LGF L+G+N+Y+L    +NWL+ + +PK G++
Sbjct: 189 FSSSSTKMGPHKNSIYVIVFSWILGFGLMGINIYYLATGFVNWLLXNDLPKVGNV 243


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