BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007311
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206...    86   9e-15
ref|XP_002520510.1| transcription initiation factor, putative [R...    84   3e-14
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13
ref|XP_003545333.1| PREDICTED: uncharacterized protein LOC100795...    79   8e-13
gb|ADD09583.1| transcription initiation factor [Trifolium repens]      77   4e-12

>ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206316 [Cucumis sativus]
            gi|449521952|ref|XP_004167993.1| PREDICTED:
            uncharacterized LOC101206316 [Cucumis sativus]
          Length = 898

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 49/115 (42%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
 Frame = -1

Query: 675  RTAVGGVDILLKWQLMTEQARQKREGRTCAVRGAQLGSDAILPTSKQPA--WXXXXXXXX 502
            R AVGG D+L KWQLM EQARQKREG   +   +Q G DA+  +S               
Sbjct: 781  RAAVGGDDMLSKWQLMAEQARQKREGGVDSASSSQAGKDAVRKSSSAAGRHGKDNLEGER 840

Query: 501  XXXXXXXXXXXXSKSQTKPVRRIFVRDVVTVLEREPQMARSTLIYRLYEGMHTDT 337
                        + +QTK  R I V+DV+ VL+REPQM+RST IYRL+  +H ++
Sbjct: 841  KGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPES 895


>ref|XP_002520510.1| transcription initiation factor, putative [Ricinus communis]
            gi|223540352|gb|EEF41923.1| transcription initiation
            factor, putative [Ricinus communis]
          Length = 927

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 53/120 (44%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
 Frame = -1

Query: 675  RTAVGGVDILLKWQLMTEQARQKREGRTCAVRGAQLGSDAI---LPTSKQPAWXXXXXXX 505
            R AVGG D+L KWQLM EQARQKRE    A  G Q   D     L TS +          
Sbjct: 759  RAAVGGDDMLSKWQLMVEQARQKREAGPEAASGIQSAKDVFGKPLLTSGKAVKDGQEPEK 818

Query: 504  XXXXXXXXXXXXXSKS-----QTKPVRRIFVRDVVTVLEREPQMARSTLIYRLYEGMHTD 340
                          ++     QT+P R I V+DV+  LEREPQM++STLIYRLYE M +D
Sbjct: 819  RSAAVTSTGARRFGRNQSVAPQTRPARSISVKDVIAALEREPQMSKSTLIYRLYERMQSD 878


>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
            predicted protein [Populus trichocarpa]
          Length = 875

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 54/124 (43%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
 Frame = -1

Query: 675  RTAVGGVDILLKWQLMTEQARQKREGRTCAVRGAQLGSDA----ILPTSKQPAWXXXXXX 508
            R AVGG DIL KWQLM EQARQKREG      G+Q   D     + P+ +          
Sbjct: 748  RAAVGGDDILSKWQLMAEQARQKREGGMEGASGSQPVKDVNRKPLSPSGRNMMENLEAEK 807

Query: 507  XXXXXXXXXXXXXXSKS--------QTKPVRRIFVRDVVTVLEREPQMARSTLIYRLYEG 352
                           K         QTK VR I V+DV++VLEREPQM+RSTLIY+LYE 
Sbjct: 808  RSHVVPSSASGKSGRKCGRNQAIVPQTKVVRTISVKDVMSVLEREPQMSRSTLIYQLYER 867

Query: 351  MHTD 340
            + +D
Sbjct: 868  IRSD 871


>ref|XP_003545333.1| PREDICTED: uncharacterized protein LOC100795389 [Glycine max]
          Length = 933

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 49/120 (40%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
 Frame = -1

Query: 675  RTAVGGVDILLKWQLMTEQARQKREGRTCAVRGAQLGSDA---ILPTSKQPAWXXXXXXX 505
            R A GG D+L KWQLM EQA+QKREG    + G+Q   D     L TS +          
Sbjct: 811  RAAYGGDDMLSKWQLMAEQAKQKREGGVDVLSGSQPAKDVNRKFLSTSGRSTKDNQEGEK 870

Query: 504  XXXXXXXXXXXXXSKS-----QTKPVRRIFVRDVVTVLEREPQMARSTLIYRLYEGMHTD 340
                          +S     QT+  R I V+DV+ VLEREPQM++S L++RLYE +H+D
Sbjct: 871  KGSSTFIAMARKLGRSHAMALQTRVARSISVKDVIAVLEREPQMSKSPLMHRLYERIHSD 930


>gb|ADD09583.1| transcription initiation factor [Trifolium repens]
          Length = 934

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
 Frame = -1

Query: 675  RTAVGGVDILLKWQLMTEQARQKREGRTCAVRGAQLGSDAILPTS----------KQPAW 526
            R AVG  D+L KWQLM EQA+QKREG T    G+Q   D    +S          ++   
Sbjct: 810  RAAVGD-DMLSKWQLMAEQAKQKREGGTDTASGSQPTKDVSRKSSPSSGRNTRDNQERER 868

Query: 525  XXXXXXXXXXXXXXXXXXXXSKSQTKPVRRIFVRDVVTVLEREPQMARSTLIYRLYEGMH 346
                                  SQT+  R I V+DV+ VLEREPQM++S+L+YR+++ +H
Sbjct: 869  KGPTSLGNSAAARKFGKNQSPGSQTRIARNISVKDVIAVLEREPQMSKSSLLYRMHDRIH 928

Query: 345  TDTGT 331
            +DT T
Sbjct: 929  SDTST 933