BLASTX nr result

ID: Coptis25_contig00007302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007302
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274829.2| PREDICTED: transcription factor ILR3-like [V...   182   2e-44
gb|AFK48825.1| unknown [Lotus japonicus]                              181   7e-44
ref|XP_004173321.1| PREDICTED: transcription factor ILR3-like [C...   174   5e-42
ref|XP_004151962.1| PREDICTED: transcription factor ILR3-like [C...   174   7e-42
ref|XP_003527314.1| PREDICTED: transcription factor ILR3-like is...   174   7e-42

>ref|XP_002274829.2| PREDICTED: transcription factor ILR3-like [Vitis vinifera]
          Length = 240

 Score =  182 bits (463), Expect = 2e-44
 Identities = 97/154 (62%), Positives = 114/154 (74%), Gaps = 3/154 (1%)
 Frame = +2

Query: 26  NSNWLNDYDLIMDGISVPVGDFIPP-PVTAFEWPSQPLNALSNVEMEAP--FGDTDGIKE 196
           NSNWL DY L M+ I+VP G+F  P P T F WPSQ L + S+V +EA   FGD+DG+KE
Sbjct: 8   NSNWLFDYGL-MEDITVPGGEFPEPTPGTGFSWPSQALKSSSSVSLEADCSFGDSDGLKE 66

Query: 197 TGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAILSDAVRM 376
            G +KR + E+C A+G+KACREK+RRD+LNERF+ELGSILEPGRPPK DKAAILSDAVRM
Sbjct: 67  LGPRKRLKHESCGATGTKACREKLRRDRLNERFLELGSILEPGRPPKTDKAAILSDAVRM 126

Query: 377 VTQLRGXXXXXXXXXXXXXXXIKELKSEKNELRD 478
           VTQLR                IKELK+EKNELRD
Sbjct: 127 VTQLRSEAQKLKESNGDLQEKIKELKAEKNELRD 160


>gb|AFK48825.1| unknown [Lotus japonicus]
          Length = 238

 Score =  181 bits (458), Expect = 7e-44
 Identities = 103/161 (63%), Positives = 116/161 (72%), Gaps = 4/161 (2%)
 Frame = +2

Query: 8   MVSPENNSNWLNDYDLIMDGISVPVGDFIPPPVTAFEWPS-QPLNALSNV---EMEAPFG 175
           MVS EN +NWL DY LI D I  P   F  PP + F WPS QPLN+ SNV   E++   G
Sbjct: 1   MVSREN-TNWLFDYGLI-DDIPAPEVTFTVPP-SGFTWPSSQPLNSSSNVVGVEIDGSLG 57

Query: 176 DTDGIKETGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAI 355
           D+D +KE GSKKR RSE+CSA+ SKACREK+RRDKLN++FVELGSILEPGRPPK DKAAI
Sbjct: 58  DSDSLKEPGSKKRVRSESCSATSSKACREKLRRDKLNDKFVELGSILEPGRPPKTDKAAI 117

Query: 356 LSDAVRMVTQLRGXXXXXXXXXXXXXXXIKELKSEKNELRD 478
           L DAVRMVTQLRG               IKELK+EKNELRD
Sbjct: 118 LIDAVRMVTQLRGEAQKMKDTNMGLQEKIKELKTEKNELRD 158


>ref|XP_004173321.1| PREDICTED: transcription factor ILR3-like [Cucumis sativus]
          Length = 235

 Score =  174 bits (442), Expect = 5e-42
 Identities = 97/159 (61%), Positives = 112/159 (70%), Gaps = 2/159 (1%)
 Frame = +2

Query: 8   MVSPENNSNWLNDYDLIMDGISVPVGDFIPPPVTAFEWPSQPLNAL--SNVEMEAPFGDT 181
           MVSPEN  NWL DY LI D I VP G+F P   ++F WP QP N    S VE++    D 
Sbjct: 1   MVSPEN-PNWLFDYGLIED-IPVPDGNF-PVASSSFSWPIQPFNGAHDSGVEIDGSLADL 57

Query: 182 DGIKETGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAILS 361
           DG  E+GSKKR RS++CSAS SKACREK+RRD+LN++F+ELGSIL+PGRPPK DKAAIL 
Sbjct: 58  DGRLESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILV 117

Query: 362 DAVRMVTQLRGXXXXXXXXXXXXXXXIKELKSEKNELRD 478
           DAVRMV QLRG               IKELK+EKNELRD
Sbjct: 118 DAVRMVNQLRGETEKLKESNSSLQEKIKELKAEKNELRD 156


>ref|XP_004151962.1| PREDICTED: transcription factor ILR3-like [Cucumis sativus]
          Length = 235

 Score =  174 bits (441), Expect = 7e-42
 Identities = 97/159 (61%), Positives = 112/159 (70%), Gaps = 2/159 (1%)
 Frame = +2

Query: 8   MVSPENNSNWLNDYDLIMDGISVPVGDFIPPPVTAFEWPSQPLNAL--SNVEMEAPFGDT 181
           MVSPEN  NWL DY LI D I VP G+F P   ++F WP QP N    S VE++    D 
Sbjct: 1   MVSPEN-PNWLFDYGLIED-IPVPDGNF-PVTSSSFSWPIQPFNGSHDSGVEIDGSLADL 57

Query: 182 DGIKETGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAILS 361
           DG  E+GSKKR RS++CSAS SKACREK+RRD+LN++F+ELGSIL+PGRPPK DKAAIL 
Sbjct: 58  DGHLESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILV 117

Query: 362 DAVRMVTQLRGXXXXXXXXXXXXXXXIKELKSEKNELRD 478
           DAVRMV QLRG               IKELK+EKNELRD
Sbjct: 118 DAVRMVNQLRGETEKLKESNSSLQEKIKELKAEKNELRD 156


>ref|XP_003527314.1| PREDICTED: transcription factor ILR3-like isoform 1 [Glycine max]
          Length = 236

 Score =  174 bits (441), Expect = 7e-42
 Identities = 99/159 (62%), Positives = 114/159 (71%), Gaps = 2/159 (1%)
 Frame = +2

Query: 8   MVSPENNSNWLNDYDLIMDGISVPVGDFIPPPVTAFEWPSQPLNALSNV--EMEAPFGDT 181
           MVS EN +NWL DY LI D I VP   F     +AF WP   LNA SNV  E++   GD+
Sbjct: 1   MVSREN-TNWLFDYGLI-DDIPVPDATF-GVNSSAFTWPPNALNASSNVGVEIDGSLGDS 57

Query: 182 DGIKETGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAILS 361
           D +KE+GSKKR RSE+C+ASGSKACREK+RRD+LN++FVELG+ILEPGRP K DKAAIL 
Sbjct: 58  DSLKESGSKKRVRSESCAASGSKACREKLRRDRLNDKFVELGAILEPGRPAKTDKAAILI 117

Query: 362 DAVRMVTQLRGXXXXXXXXXXXXXXXIKELKSEKNELRD 478
           DAVRMVTQLRG               IKELK+EKNELRD
Sbjct: 118 DAVRMVTQLRGEAQKLKDTNQGLQEKIKELKAEKNELRD 156


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