BLASTX nr result
ID: Coptis25_contig00007300
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007300 (252 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329835.1| predicted protein [Populus trichocarpa] gi|2... 82 4e-14 ref|XP_002336447.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 ref|XP_002893527.1| hypothetical protein ARALYDRAFT_313543 [Arab... 70 1e-10 ref|NP_001078002.1| uncharacterized protein [Arabidopsis thalian... 70 1e-10 gb|ABK28329.1| unknown [Arabidopsis thaliana] 70 1e-10 >ref|XP_002329835.1| predicted protein [Populus trichocarpa] gi|222870897|gb|EEF08028.1| predicted protein [Populus trichocarpa] Length = 98 Score = 82.4 bits (202), Expect = 4e-14 Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 5/74 (6%) Frame = +1 Query: 46 ATSCAKSFLRSSTFR-SAAAKLTPQAKP-ARPSASPFRLPKQTP---PIFRSPVELSCAV 210 AT+ A+SFLRS+ R SAAA+L KP ++P++SPFR+ K++P IFRSPVE+SC V Sbjct: 3 ATAAARSFLRSTATRTSAAARLASAPKPGSKPASSPFRISKESPLSHRIFRSPVEMSCCV 62 Query: 211 ETLLPFHTATASAL 252 ET+LP+HTATASAL Sbjct: 63 ETMLPYHTATASAL 76 >ref|XP_002336447.1| predicted protein [Populus trichocarpa] gi|222835040|gb|EEE73489.1| predicted protein [Populus trichocarpa] Length = 95 Score = 74.3 bits (181), Expect = 1e-11 Identities = 39/72 (54%), Positives = 55/72 (76%), Gaps = 3/72 (4%) Frame = +1 Query: 46 ATSCAKSFLRSSTFRSAAAKLTPQAKPARPSASPFRLPKQTP---PIFRSPVELSCAVET 216 AT+ ++SFLRS++ +AA + Q ++P+ SPFR+ KQ+P IFRSPVE+SC VET Sbjct: 3 ATAASRSFLRSTS--AAARMASAQKAGSKPAFSPFRISKQSPFSPRIFRSPVEMSCCVET 60 Query: 217 LLPFHTATASAL 252 +LP+HTAT+SAL Sbjct: 61 MLPYHTATSSAL 72 >ref|XP_002893527.1| hypothetical protein ARALYDRAFT_313543 [Arabidopsis lyrata subsp. lyrata] gi|297339369|gb|EFH69786.1| hypothetical protein ARALYDRAFT_313543 [Arabidopsis lyrata subsp. lyrata] Length = 95 Score = 70.5 bits (171), Expect = 1e-10 Identities = 42/73 (57%), Positives = 52/73 (71%), Gaps = 6/73 (8%) Frame = +1 Query: 52 SCAKSFLRSSTFRSAAA--KLTPQAKPARPSA-SPFRLPKQTP---PIFRSPVELSCAVE 213 S A+S RS+ R++AA + + KP SA S FR+PKQ+P IFRSPVELSC VE Sbjct: 2 SAARSVFRSAASRASAAASRFSTGPKPMPSSARSAFRMPKQSPLSNRIFRSPVELSCCVE 61 Query: 214 TLLPFHTATASAL 252 T+LP+HTATASAL Sbjct: 62 TMLPYHTATASAL 74 >ref|NP_001078002.1| uncharacterized protein [Arabidopsis thaliana] gi|330253803|gb|AEC08897.1| uncharacterized protein [Arabidopsis thaliana] Length = 89 Score = 70.5 bits (171), Expect = 1e-10 Identities = 43/71 (60%), Positives = 49/71 (69%), Gaps = 4/71 (5%) Frame = +1 Query: 52 SCAKSFLRSSTFRSAAAKLTPQAKPARPSA-SPFRLPKQTP---PIFRSPVELSCAVETL 219 S A+S RS R+A A L KP SA S F+LPKQ+P IFRSPVELSC VET+ Sbjct: 2 SAARSVFRSGVGRAAVAALR-STKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETM 60 Query: 220 LPFHTATASAL 252 LP+HTATASAL Sbjct: 61 LPYHTATASAL 71 >gb|ABK28329.1| unknown [Arabidopsis thaliana] Length = 94 Score = 70.5 bits (171), Expect = 1e-10 Identities = 43/71 (60%), Positives = 49/71 (69%), Gaps = 4/71 (5%) Frame = +1 Query: 52 SCAKSFLRSSTFRSAAAKLTPQAKPARPSA-SPFRLPKQTP---PIFRSPVELSCAVETL 219 S A+S RS R+A A L KP SA S F+LPKQ+P IFRSPVELSC VET+ Sbjct: 2 SAARSVFRSGVGRAAVAALR-STKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETM 60 Query: 220 LPFHTATASAL 252 LP+HTATASAL Sbjct: 61 LPYHTATASAL 71