BLASTX nr result

ID: Coptis25_contig00007291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007291
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241154.1| uncharacterized protein LOC100777895 [Glycin...    67   5e-09
ref|XP_002264722.1| PREDICTED: uncharacterized protein LOC100261...    67   6e-09
emb|CAN62068.1| hypothetical protein VITISV_035260 [Vitis vinifera]    65   2e-08
gb|AFK37511.1| unknown [Lotus japonicus]                               64   3e-08
ref|XP_002321842.1| predicted protein [Populus trichocarpa] gi|2...    60   6e-07

>ref|NP_001241154.1| uncharacterized protein LOC100777895 [Glycine max]
           gi|255626341|gb|ACU13515.1| unknown [Glycine max]
           gi|255634813|gb|ACU17767.1| unknown [Glycine max]
          Length = 173

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 17/90 (18%)
 Frame = -1

Query: 516 DFQTKKPSVGFGST----VQSKDGKKKKRSGERATIIRRTPLQKP*FLTK---------- 379
           D    K  VGFGS+    V     KKKK   ERA+IIRR+PL+KP F+++          
Sbjct: 39  DSGPSKTGVGFGSSDTAAVPVSSKKKKKAQRERASIIRRSPLEKPAFVSEQQVGKAKEEN 98

Query: 378 ---TAFLLTWLCLGSLIIIEGLALAASGYI 298
              +AFLL WL  G +I++EG+ALAASG++
Sbjct: 99  KNESAFLLAWLGFGVVILVEGIALAASGFL 128


>ref|XP_002264722.1| PREDICTED: uncharacterized protein LOC100261162 [Vitis vinifera]
           gi|296084154|emb|CBI24542.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 17/88 (19%)
 Frame = -1

Query: 510 QTKKPSVGFGS---TVQSKDGKKKKRSG-ERATIIRRTPLQKP*FL-------------T 382
           Q   P  GFGS   TV++   KKK++   ERA+IIRR+P+QKP FL              
Sbjct: 43  QPTSPGQGFGSASSTVKTAVNKKKEKGRRERASIIRRSPVQKPEFLGVEEQGESKEQGRN 102

Query: 381 KTAFLLTWLCLGSLIIIEGLALAASGYI 298
           ++AFLL WL LG +I++EG+ LAASG++
Sbjct: 103 ESAFLLAWLGLGGIILVEGIVLAASGFL 130


>emb|CAN62068.1| hypothetical protein VITISV_035260 [Vitis vinifera]
          Length = 132

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 17/86 (19%)
 Frame = -1

Query: 510 QTKKPSVGFGS---TVQSKDGKKKKRSG-ERATIIRRTPLQKP*FL-------------T 382
           Q   P  GFGS   TV++   KKK++   ERA+IIRR+P+QKP FL              
Sbjct: 43  QPTSPGQGFGSASSTVKTAVNKKKEKGRRERASIIRRSPVQKPEFLGVEEQGESKEQGRN 102

Query: 381 KTAFLLTWLCLGSLIIIEGLALAASG 304
           ++AFLL WL LG +I++EG+ LAASG
Sbjct: 103 ESAFLLAWLGLGGIILVEGIVLAASG 128


>gb|AFK37511.1| unknown [Lotus japonicus]
          Length = 168

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 15/88 (17%)
 Frame = -1

Query: 516 DFQTKKPSVGFGSTVQSKDGKKKKRSGERATIIRRTPLQKP*FL---------------T 382
           D   +KP VGFG T       K+K  G R  IIRR+P++KP                  T
Sbjct: 43  DSAPQKPGVGFGQT-------KQKDKGRRRDIIRRSPVEKPALFDSSEQKQQQTVEQSKT 95

Query: 381 KTAFLLTWLCLGSLIIIEGLALAASGYI 298
           +TAFLL WL  G++I++EG+ALAASG++
Sbjct: 96  ETAFLLAWLGFGAVILVEGIALAASGFL 123


>ref|XP_002321842.1| predicted protein [Populus trichocarpa] gi|222868838|gb|EEF05969.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 25/95 (26%)
 Frame = -1

Query: 507 TKKPSVGFGS----------TVQSKDGKKKKRSG--ERATIIRRTPLQKP*FLTK----- 379
           T  P  GFGS          T    + K K +    ERA+IIRR P +KP F+++     
Sbjct: 45  TVSPGQGFGSQSAAAATTSKTASGSESKNKPKGNRRERASIIRRAPAEKPGFISQENEVK 104

Query: 378 --------TAFLLTWLCLGSLIIIEGLALAASGYI 298
                   TAFLL WL LG +I++EG+ LAASG++
Sbjct: 105 VKEQGRNETAFLLAWLGLGGIILVEGILLAASGFL 139


Top