BLASTX nr result

ID: Coptis25_contig00007288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007288
         (2557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266000.2| PREDICTED: T-complex protein 1 subunit eta-l...   969   0.0  
ref|XP_002328218.1| predicted protein [Populus trichocarpa] gi|2...   967   0.0  
emb|CAN70107.1| hypothetical protein VITISV_002043 [Vitis vinifera]   963   0.0  
ref|XP_002312854.1| predicted protein [Populus trichocarpa] gi|2...   962   0.0  
ref|XP_004144081.1| PREDICTED: T-complex protein 1 subunit eta-l...   961   0.0  

>ref|XP_002266000.2| PREDICTED: T-complex protein 1 subunit eta-like [Vitis vinifera]
            gi|296088202|emb|CBI35717.3| unnamed protein product
            [Vitis vinifera]
          Length = 562

 Score =  969 bits (2506), Expect = 0.0
 Identities = 492/532 (92%), Positives = 517/532 (97%)
 Frame = -3

Query: 1775 QPQIILLKEGTDTSQGKPQIISNINACTGIADVVRTTLGPRGMDKLIHDEKGNATISNDG 1596
            QPQIILLKEGTDTSQGK Q++SNI+ACT +ADVVRTTLGPRGMDKLIHD+KGN TISNDG
Sbjct: 6    QPQIILLKEGTDTSQGKAQLVSNISACTVVADVVRTTLGPRGMDKLIHDDKGNTTISNDG 65

Query: 1595 ATIMKLLDVVHPAAKILVDIAKSQDSEVGDGTTTVVLFAGEFLKEAKPFIEDGVHSQSLI 1416
            ATIMKLLD+VHPAAKILVDIAKSQDSEVGDGTTTVVL AGEFLKEAKPFIEDGVH Q+LI
Sbjct: 66   ATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVHPQNLI 125

Query: 1415 RSFRAASNLAISKIKELAVSIEGKSMEEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDS 1236
            RS+R AS LAI KIKELAVSIEGKS+EEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDS
Sbjct: 126  RSYRTASYLAIEKIKELAVSIEGKSLEEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDS 185

Query: 1235 VISIGNDDRLNMIGIKKVPGGTMRDSFLVDGVAFKKTFSYAGFEQQPKKFLNPKMLLLNI 1056
            VI+IGNDDRLNMIGIKKVPGGTMRDSFLV+GVAFKKTFSYAGFEQQPKKFLNPK+LLLNI
Sbjct: 186  VIAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNI 245

Query: 1055 ELELKSEKENAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVQSGAKIVLSRLAIGDLATQY 876
            ELELKSEKENAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVQSGAKIVLSRLAIGDLATQY
Sbjct: 246  ELELKSEKENAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVQSGAKIVLSRLAIGDLATQY 305

Query: 875  FADRDVFCAGRVTEEDLQRVAAASGGTVQTSVNNVIDEVLGTCEVFEERQVGNERFNIFS 696
            FADRD+FCAGRVTEEDLQRVAAA+GGTVQT+VNN+IDEVLG+CE+FEERQVGNERFNIFS
Sbjct: 306  FADRDIFCAGRVTEEDLQRVAAATGGTVQTTVNNIIDEVLGSCELFEERQVGNERFNIFS 365

Query: 695  GCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVAGGGAIDMAISRYLWE 516
            GCPSG+TATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVAGGGAIDM ISRYL +
Sbjct: 366  GCPSGQTATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVAGGGAIDMEISRYLRQ 425

Query: 515  HARKIAGKAQLFINSYAKAFEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGARYGVDI 336
            HAR IAGK+QLFINSYAKA EVIPRQLCDNAGFDATDVLNKLRQKHALPSGEG  +GVDI
Sbjct: 426  HARTIAGKSQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGGLFGVDI 485

Query: 335  NTGGIIDTFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQGD 180
            NTGGI D+FANFVWEPAVVKINAINAATEAACL+LSVDETVKNPKSESAQG+
Sbjct: 486  NTGGIADSFANFVWEPAVVKINAINAATEAACLVLSVDETVKNPKSESAQGE 537


>ref|XP_002328218.1| predicted protein [Populus trichocarpa] gi|222837733|gb|EEE76098.1|
            predicted protein [Populus trichocarpa]
          Length = 561

 Score =  967 bits (2499), Expect = 0.0
 Identities = 484/532 (90%), Positives = 517/532 (97%)
 Frame = -3

Query: 1775 QPQIILLKEGTDTSQGKPQIISNINACTGIADVVRTTLGPRGMDKLIHDEKGNATISNDG 1596
            QPQIILLKEGTDTSQGK Q++SNINACT +ADVVRTTLGPRGMDKLIHD+KGN TISNDG
Sbjct: 6    QPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRTTLGPRGMDKLIHDDKGNVTISNDG 65

Query: 1595 ATIMKLLDVVHPAAKILVDIAKSQDSEVGDGTTTVVLFAGEFLKEAKPFIEDGVHSQSLI 1416
            ATIMKLLD++HPA+KILVDIAKSQDSEVGDGTTTVVL AGEFLKEAKPF+E+GVH Q+LI
Sbjct: 66   ATIMKLLDIIHPASKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFVEEGVHPQNLI 125

Query: 1415 RSFRAASNLAISKIKELAVSIEGKSMEEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDS 1236
            RS+R A NLAI K+KELAVSIEGKS+EEKKSLLAKCAATTLSSKLIGGEKEFFASMVVD+
Sbjct: 126  RSYRTACNLAIEKVKELAVSIEGKSLEEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDA 185

Query: 1235 VISIGNDDRLNMIGIKKVPGGTMRDSFLVDGVAFKKTFSYAGFEQQPKKFLNPKMLLLNI 1056
            VI+IGNDDRLNMIGIKKVPGGTMRDSFLV+GVAFKKTFSYAGFEQQPKKF+NPKMLLLNI
Sbjct: 186  VIAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFVNPKMLLLNI 245

Query: 1055 ELELKSEKENAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVQSGAKIVLSRLAIGDLATQY 876
            ELELKSEKENAEIRLSDP QYQSIVDAEWNIIYDKLDKCVQSGAK+VLSRLAIGDLATQY
Sbjct: 246  ELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQY 305

Query: 875  FADRDVFCAGRVTEEDLQRVAAASGGTVQTSVNNVIDEVLGTCEVFEERQVGNERFNIFS 696
            FADRD+FCAGRV+EEDLQRV+AA+GGTVQT+VNN+IDEVLGTCE+FEE+QVGNERFNIFS
Sbjct: 306  FADRDIFCAGRVSEEDLQRVSAATGGTVQTTVNNIIDEVLGTCEIFEEKQVGNERFNIFS 365

Query: 695  GCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVAGGGAIDMAISRYLWE 516
            GCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRA+KNSTVVAGGGAIDM ISRYL +
Sbjct: 366  GCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRAMKNSTVVAGGGAIDMEISRYLRQ 425

Query: 515  HARKIAGKAQLFINSYAKAFEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGARYGVDI 336
            HAR IAGK+QLFINSYAKA EVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGA YGVDI
Sbjct: 426  HARTIAGKSQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGAPYGVDI 485

Query: 335  NTGGIIDTFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQGD 180
            NTGGI D+F+NFVWEP+VVKINAINAATEAACLILSVDETVKNPKSESAQG+
Sbjct: 486  NTGGIADSFSNFVWEPSVVKINAINAATEAACLILSVDETVKNPKSESAQGE 537


>emb|CAN70107.1| hypothetical protein VITISV_002043 [Vitis vinifera]
          Length = 567

 Score =  963 bits (2490), Expect = 0.0
 Identities = 492/537 (91%), Positives = 517/537 (96%), Gaps = 5/537 (0%)
 Frame = -3

Query: 1775 QPQIILLKEGTDTSQGKPQIISNINACTGIADVVRTTLGPRGMDKLIHDEKGNATISNDG 1596
            QPQIILLKEGTDTSQGK Q++SNI+ACT +ADVVRTTLGPRGMDKLIHD+KGN TISNDG
Sbjct: 6    QPQIILLKEGTDTSQGKAQLVSNISACTVVADVVRTTLGPRGMDKLIHDDKGNTTISNDG 65

Query: 1595 ATIMKLLDVVHPAAKILVDIAKSQDSEVGDGTTTVVLFAGEFLKEAKPFIEDGVHSQSLI 1416
            ATIMKLLD+VHPAAKILVDIAKSQDSEVGDGTTTVVL AGEFLKEAKPFIEDGVH Q+LI
Sbjct: 66   ATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVHPQNLI 125

Query: 1415 RSFRAASNLAISKIKELAVSIEGKSMEEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDS 1236
            RS+R AS LAI KIKELAVSIEGKS+EEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDS
Sbjct: 126  RSYRTASYLAIEKIKELAVSIEGKSLEEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDS 185

Query: 1235 VISIGNDDRLNMIGIKKVPGGTMRDSFLVDGVAFKKTFSYAGFEQQPKKFLNPKMLLLNI 1056
            VI+IGNDDRLNMIGIKKVPGGTMRDSFLV+GVAFKKTFSYAGFEQQPKKFLNPK+LLLNI
Sbjct: 186  VIAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNI 245

Query: 1055 ELELKSEKENAEIR-----LSDPLQYQSIVDAEWNIIYDKLDKCVQSGAKIVLSRLAIGD 891
            ELELKSEKENAEIR     LSDPLQYQSIVDAEWNIIYDKLDKCVQSGAKIVLSRLAIGD
Sbjct: 246  ELELKSEKENAEIRQDYFGLSDPLQYQSIVDAEWNIIYDKLDKCVQSGAKIVLSRLAIGD 305

Query: 890  LATQYFADRDVFCAGRVTEEDLQRVAAASGGTVQTSVNNVIDEVLGTCEVFEERQVGNER 711
            LATQYFADRD+FCAGRVTEEDLQRVAAA+GGTVQT+VNN+IDEVLG+CE+FEERQVGNER
Sbjct: 306  LATQYFADRDIFCAGRVTEEDLQRVAAATGGTVQTTVNNIIDEVLGSCELFEERQVGNER 365

Query: 710  FNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVAGGGAIDMAIS 531
            FNIFSGCPSG+TATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVAGGGAIDM IS
Sbjct: 366  FNIFSGCPSGQTATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVAGGGAIDMEIS 425

Query: 530  RYLWEHARKIAGKAQLFINSYAKAFEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGAR 351
            RYL +HAR IAGK+QLFINSYAKA EVIPRQLCDNAGFDATDVLNKLRQKHALPSGEG  
Sbjct: 426  RYLRQHARTIAGKSQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGGL 485

Query: 350  YGVDINTGGIIDTFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQGD 180
            +GVDINTGGI D+FANFVWEPAVVKINAINAATEAACL+LSVDETVKNPKSESAQG+
Sbjct: 486  FGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLVLSVDETVKNPKSESAQGE 542


>ref|XP_002312854.1| predicted protein [Populus trichocarpa] gi|222849262|gb|EEE86809.1|
            predicted protein [Populus trichocarpa]
          Length = 561

 Score =  962 bits (2487), Expect = 0.0
 Identities = 484/532 (90%), Positives = 513/532 (96%)
 Frame = -3

Query: 1775 QPQIILLKEGTDTSQGKPQIISNINACTGIADVVRTTLGPRGMDKLIHDEKGNATISNDG 1596
            QPQIILLKEGTDTSQGK Q++SNINACT +ADVVRTTLGPRGMDKLIHD+KGN TISNDG
Sbjct: 6    QPQIILLKEGTDTSQGKAQLLSNINACTAVADVVRTTLGPRGMDKLIHDDKGNVTISNDG 65

Query: 1595 ATIMKLLDVVHPAAKILVDIAKSQDSEVGDGTTTVVLFAGEFLKEAKPFIEDGVHSQSLI 1416
            ATIMKLLD++HPAAKILVDIAKSQDSEVGDGTTTVVL AGEFLKEAKPF+EDGVH Q+LI
Sbjct: 66   ATIMKLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFVEDGVHPQNLI 125

Query: 1415 RSFRAASNLAISKIKELAVSIEGKSMEEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDS 1236
            RS+R A NLAI K+KELA SIEGKS+EEKKSLLAKCAATTLSSKLIGGEKEFFASMVVD+
Sbjct: 126  RSYRTACNLAIEKVKELASSIEGKSLEEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDA 185

Query: 1235 VISIGNDDRLNMIGIKKVPGGTMRDSFLVDGVAFKKTFSYAGFEQQPKKFLNPKMLLLNI 1056
            VI+IGNDDRLNMIGIKKVPGG MRDSFLV+GVAFKKTFSYAGFEQQPKKF+NPK+LLLNI
Sbjct: 186  VIAIGNDDRLNMIGIKKVPGGNMRDSFLVNGVAFKKTFSYAGFEQQPKKFVNPKILLLNI 245

Query: 1055 ELELKSEKENAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVQSGAKIVLSRLAIGDLATQY 876
            ELELKSEKENAEIRLSDP QYQSIVDAEWNIIYDKLDKC QSGAKIVLSRLAIGDLATQY
Sbjct: 246  ELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCAQSGAKIVLSRLAIGDLATQY 305

Query: 875  FADRDVFCAGRVTEEDLQRVAAASGGTVQTSVNNVIDEVLGTCEVFEERQVGNERFNIFS 696
            FADRD+FCAGRV+EEDLQRVAAA+GGTVQT++NNVIDEVLGTCE+FEE+QVGNERFNIF+
Sbjct: 306  FADRDIFCAGRVSEEDLQRVAAATGGTVQTTINNVIDEVLGTCEIFEEKQVGNERFNIFN 365

Query: 695  GCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVAGGGAIDMAISRYLWE 516
            GCPSG TATIVLRGGADQFIEEAERSLHDAIMIVRRA+KNSTVVAGGGAIDM ISRYL +
Sbjct: 366  GCPSGTTATIVLRGGADQFIEEAERSLHDAIMIVRRAMKNSTVVAGGGAIDMEISRYLRQ 425

Query: 515  HARKIAGKAQLFINSYAKAFEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGARYGVDI 336
            HAR IAGK+QLFINSYAKA EVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGA YGVDI
Sbjct: 426  HARTIAGKSQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGAPYGVDI 485

Query: 335  NTGGIIDTFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQGD 180
            NTGGI D+FANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQG+
Sbjct: 486  NTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQGE 537


>ref|XP_004144081.1| PREDICTED: T-complex protein 1 subunit eta-like [Cucumis sativus]
            gi|449493528|ref|XP_004159333.1| PREDICTED: T-complex
            protein 1 subunit eta-like [Cucumis sativus]
          Length = 562

 Score =  961 bits (2484), Expect = 0.0
 Identities = 485/532 (91%), Positives = 513/532 (96%)
 Frame = -3

Query: 1775 QPQIILLKEGTDTSQGKPQIISNINACTGIADVVRTTLGPRGMDKLIHDEKGNATISNDG 1596
            QPQIILLKEGTDTSQGK Q++SNINACT +ADVVRTTLGPRGMDKLIHD+KGN TISNDG
Sbjct: 6    QPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRTTLGPRGMDKLIHDDKGNVTISNDG 65

Query: 1595 ATIMKLLDVVHPAAKILVDIAKSQDSEVGDGTTTVVLFAGEFLKEAKPFIEDGVHSQSLI 1416
            ATIMKLLD+VHPAAKILVDIAKSQDSEVGDGTTTVVL A EFLKEAKPFIEDGVHSQ+LI
Sbjct: 66   ATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVHSQNLI 125

Query: 1415 RSFRAASNLAISKIKELAVSIEGKSMEEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDS 1236
            RS+R AS LAI K+KELA+SIEGKS+EEKKSLLAKCAATTLSSKLIGGEK+FFASMVVDS
Sbjct: 126  RSYRTASYLAIEKVKELAISIEGKSLEEKKSLLAKCAATTLSSKLIGGEKDFFASMVVDS 185

Query: 1235 VISIGNDDRLNMIGIKKVPGGTMRDSFLVDGVAFKKTFSYAGFEQQPKKFLNPKMLLLNI 1056
            VI+IGN+DRLNMIGIKKVPGGTMRDSFLV+GVAFKKTFSYAGFEQQPKKF NPK+LLLNI
Sbjct: 186  VIAIGNEDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFSNPKILLLNI 245

Query: 1055 ELELKSEKENAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVQSGAKIVLSRLAIGDLATQY 876
            ELELKSEKENAEIRLSDP QYQSIVDAEWNIIY+KLDKCV+SGAK+VLSRLAIGDL TQY
Sbjct: 246  ELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYEKLDKCVESGAKVVLSRLAIGDLGTQY 305

Query: 875  FADRDVFCAGRVTEEDLQRVAAASGGTVQTSVNNVIDEVLGTCEVFEERQVGNERFNIFS 696
            FADRD+FCAGRV EEDLQRVAAA+GGT+QTSVNNVIDEVLGTCEVFEE+QVGNER+NIFS
Sbjct: 306  FADRDIFCAGRVAEEDLQRVAAATGGTIQTSVNNVIDEVLGTCEVFEEKQVGNERYNIFS 365

Query: 695  GCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVAGGGAIDMAISRYLWE 516
            GCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVAGGGAIDM ISRYL +
Sbjct: 366  GCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVAGGGAIDMEISRYLRQ 425

Query: 515  HARKIAGKAQLFINSYAKAFEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGARYGVDI 336
            HAR IAGK+QLFINSYAKA EVIPRQLCDNAGFDATDVLNKLRQKHA PSGEGA YGVDI
Sbjct: 426  HARTIAGKSQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHAHPSGEGAPYGVDI 485

Query: 335  NTGGIIDTFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQGD 180
            NTGG+ D+FANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQG+
Sbjct: 486  NTGGVADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQGE 537


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