BLASTX nr result

ID: Coptis25_contig00007287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007287
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersic...   108   6e-22
gb|ACA05276.1| putative ethylene insensitive 5/7 [Solanum lycope...   108   6e-22
ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   107   1e-21
emb|CBI34215.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   105   3e-21

>ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum]
           gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4
           [Solanum lycopersicum]
          Length = 978

 Score =  108 bits (269), Expect = 6e-22
 Identities = 46/70 (65%), Positives = 56/70 (80%)
 Frame = +2

Query: 59  MGIPAFYRYLVEKYPLSVVNAIXXXXNDGGIIDSSLPNPNGIEFDNLYLDMNGIIHPCFH 238
           MG+PAFYR+L ++YPLS+V+ +     D   +D S PNPNG+EFDNLYLDMNGIIHPCFH
Sbjct: 1   MGVPAFYRWLADRYPLSIVDMVEEEPKDDVPVDISKPNPNGMEFDNLYLDMNGIIHPCFH 60

Query: 239 PEGQAAPKTY 268
           PEG+ AP TY
Sbjct: 61  PEGKPAPATY 70


>gb|ACA05276.1| putative ethylene insensitive 5/7 [Solanum lycopersicum]
          Length = 696

 Score =  108 bits (269), Expect = 6e-22
 Identities = 46/70 (65%), Positives = 56/70 (80%)
 Frame = +2

Query: 59  MGIPAFYRYLVEKYPLSVVNAIXXXXNDGGIIDSSLPNPNGIEFDNLYLDMNGIIHPCFH 238
           MG+PAFYR+L ++YPLS+V+ +     D   +D S PNPNG+EFDNLYLDMNGIIHPCFH
Sbjct: 1   MGVPAFYRWLADRYPLSIVDMVEEEPKDDVPVDISKPNPNGMEFDNLYLDMNGIIHPCFH 60

Query: 239 PEGQAAPKTY 268
           PEG+ AP TY
Sbjct: 61  PEGKPAPATY 70


>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score =  107 bits (266), Expect = 1e-21
 Identities = 46/71 (64%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
 Frame = +2

Query: 59  MGIPAFYRYLVEKYPLSVVNAIXXXXNDGGI-IDSSLPNPNGIEFDNLYLDMNGIIHPCF 235
           MG+PAFYR+L ++YPL+V++ +    ++GG  ID S PNPNG+EFDNLYLDMNGIIHPCF
Sbjct: 1   MGVPAFYRWLADRYPLAVMDVVEEEPSEGGAEIDVSRPNPNGMEFDNLYLDMNGIIHPCF 60

Query: 236 HPEGQAAPKTY 268
           HP+G+ AP TY
Sbjct: 61  HPDGKPAPTTY 71


>emb|CBI34215.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  107 bits (266), Expect = 1e-21
 Identities = 46/71 (64%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
 Frame = +2

Query: 59  MGIPAFYRYLVEKYPLSVVNAIXXXXNDGGI-IDSSLPNPNGIEFDNLYLDMNGIIHPCF 235
           MG+PAFYR+L ++YPL+V++ +    ++GG  ID S PNPNG+EFDNLYLDMNGIIHPCF
Sbjct: 1   MGVPAFYRWLADRYPLAVMDVVEEEPSEGGAEIDVSRPNPNGMEFDNLYLDMNGIIHPCF 60

Query: 236 HPEGQAAPKTY 268
           HP+G+ AP TY
Sbjct: 61  HPDGKPAPTTY 71


>ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 960

 Score =  105 bits (263), Expect = 3e-21
 Identities = 45/71 (63%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
 Frame = +2

Query: 59  MGIPAFYRYLVEKYPLSVVNAIXXXXNDG-GIIDSSLPNPNGIEFDNLYLDMNGIIHPCF 235
           MG+PAFYR+L ++YPLS+ + +    + G G +D S PNPNG+EFDNLYLDMNGIIHPCF
Sbjct: 1   MGVPAFYRWLADRYPLSIADVVEEEPSVGSGAVDVSKPNPNGMEFDNLYLDMNGIIHPCF 60

Query: 236 HPEGQAAPKTY 268
           HP+G++AP TY
Sbjct: 61  HPDGKSAPTTY 71


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