BLASTX nr result
ID: Coptis25_contig00007287
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007287 (268 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersic... 108 6e-22 gb|ACA05276.1| putative ethylene insensitive 5/7 [Solanum lycope... 108 6e-22 ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit... 107 1e-21 emb|CBI34215.3| unnamed protein product [Vitis vinifera] 107 1e-21 ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly... 105 3e-21 >ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum] gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4 [Solanum lycopersicum] Length = 978 Score = 108 bits (269), Expect = 6e-22 Identities = 46/70 (65%), Positives = 56/70 (80%) Frame = +2 Query: 59 MGIPAFYRYLVEKYPLSVVNAIXXXXNDGGIIDSSLPNPNGIEFDNLYLDMNGIIHPCFH 238 MG+PAFYR+L ++YPLS+V+ + D +D S PNPNG+EFDNLYLDMNGIIHPCFH Sbjct: 1 MGVPAFYRWLADRYPLSIVDMVEEEPKDDVPVDISKPNPNGMEFDNLYLDMNGIIHPCFH 60 Query: 239 PEGQAAPKTY 268 PEG+ AP TY Sbjct: 61 PEGKPAPATY 70 >gb|ACA05276.1| putative ethylene insensitive 5/7 [Solanum lycopersicum] Length = 696 Score = 108 bits (269), Expect = 6e-22 Identities = 46/70 (65%), Positives = 56/70 (80%) Frame = +2 Query: 59 MGIPAFYRYLVEKYPLSVVNAIXXXXNDGGIIDSSLPNPNGIEFDNLYLDMNGIIHPCFH 238 MG+PAFYR+L ++YPLS+V+ + D +D S PNPNG+EFDNLYLDMNGIIHPCFH Sbjct: 1 MGVPAFYRWLADRYPLSIVDMVEEEPKDDVPVDISKPNPNGMEFDNLYLDMNGIIHPCFH 60 Query: 239 PEGQAAPKTY 268 PEG+ AP TY Sbjct: 61 PEGKPAPATY 70 >ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera] Length = 950 Score = 107 bits (266), Expect = 1e-21 Identities = 46/71 (64%), Positives = 59/71 (83%), Gaps = 1/71 (1%) Frame = +2 Query: 59 MGIPAFYRYLVEKYPLSVVNAIXXXXNDGGI-IDSSLPNPNGIEFDNLYLDMNGIIHPCF 235 MG+PAFYR+L ++YPL+V++ + ++GG ID S PNPNG+EFDNLYLDMNGIIHPCF Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEPSEGGAEIDVSRPNPNGMEFDNLYLDMNGIIHPCF 60 Query: 236 HPEGQAAPKTY 268 HP+G+ AP TY Sbjct: 61 HPDGKPAPTTY 71 >emb|CBI34215.3| unnamed protein product [Vitis vinifera] Length = 1083 Score = 107 bits (266), Expect = 1e-21 Identities = 46/71 (64%), Positives = 59/71 (83%), Gaps = 1/71 (1%) Frame = +2 Query: 59 MGIPAFYRYLVEKYPLSVVNAIXXXXNDGGI-IDSSLPNPNGIEFDNLYLDMNGIIHPCF 235 MG+PAFYR+L ++YPL+V++ + ++GG ID S PNPNG+EFDNLYLDMNGIIHPCF Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEPSEGGAEIDVSRPNPNGMEFDNLYLDMNGIIHPCF 60 Query: 236 HPEGQAAPKTY 268 HP+G+ AP TY Sbjct: 61 HPDGKPAPTTY 71 >ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max] Length = 960 Score = 105 bits (263), Expect = 3e-21 Identities = 45/71 (63%), Positives = 58/71 (81%), Gaps = 1/71 (1%) Frame = +2 Query: 59 MGIPAFYRYLVEKYPLSVVNAIXXXXNDG-GIIDSSLPNPNGIEFDNLYLDMNGIIHPCF 235 MG+PAFYR+L ++YPLS+ + + + G G +D S PNPNG+EFDNLYLDMNGIIHPCF Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEEPSVGSGAVDVSKPNPNGMEFDNLYLDMNGIIHPCF 60 Query: 236 HPEGQAAPKTY 268 HP+G++AP TY Sbjct: 61 HPDGKSAPTTY 71