BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007285
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   192   1e-46
ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|2...   157   3e-36
ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   156   7e-36
ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|2...   150   4e-34
ref|XP_003638419.1| RING finger protein [Medicago truncatula] gi...   145   2e-32

>ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Vitis vinifera]
          Length = 162

 Score =  192 bits (488), Expect = 1e-46
 Identities = 105/172 (61%), Positives = 124/172 (72%), Gaps = 2/172 (1%)
 Frame = +3

Query: 243 MGLYSSLNDASPGSIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATE-GLF 419
           MGL S LND S  SIPL LV  IANCV Y+RSL+ G+ Q MG SRF    DA   E GL 
Sbjct: 1   MGLQSQLNDVSSDSIPLLLVAIIANCVAYIRSLLLGLFQSMGLSRF----DADEVEDGLL 56

Query: 420 SAMSSGLARLIMVSEQSNNMSGVFCYK-SEDRVAEFTYSDNCVVCLCRLKDGEQVRGLAC 596
            A+ SGLA LI+++EQ N ++ VF Y+  ED  A    + +CVVCLCRL+DG+QVR LAC
Sbjct: 57  GAVGSGLASLIVLAEQLN-LNRVFSYRYGEDGGA----ASDCVVCLCRLRDGDQVRRLAC 111

Query: 597 RHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 752
           RHVFHK C DGW+ DHLN  CPLCRSPLVS+ER  + QR+V GDLVTWFS+R
Sbjct: 112 RHVFHKECFDGWL-DHLNFNCPLCRSPLVSDERVALTQRRVGGDLVTWFSLR 162


>ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|222852239|gb|EEE89786.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  157 bits (398), Expect = 3e-36
 Identities = 89/173 (51%), Positives = 110/173 (63%), Gaps = 3/173 (1%)
 Frame = +3

Query: 243 MGLYSSLNDASPGSIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATEGLFS 422
           MGL + LND S  SIPL L+ FIANCV  LRS  F +   +G  R       V  + L  
Sbjct: 1   MGLQNQLNDVSSESIPLLLIAFIANCVACLRSFFFSVFHSVGVHRLDQAH--VMDDRLMG 58

Query: 423 AMSSGLARLIMVSEQSNNMSGVFCYK---SEDRVAEFTYSDNCVVCLCRLKDGEQVRGLA 593
           +M SGLA LI+++EQ   ++ VF YK     D   +   SD CVVCLC L+DG+QVR L 
Sbjct: 59  SMGSGLAGLIVLAEQ-RKLNRVFAYKYCCGRDDGNDKGGSD-CVVCLCTLRDGDQVRKLD 116

Query: 594 CRHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 752
           CRHVFHK C DGW+ DHLN  CPLCR PLVS+ER +  +R+V  +LV WFS+R
Sbjct: 117 CRHVFHKECFDGWL-DHLNFNCPLCRWPLVSDERVEETRRRVGENLVEWFSLR 168


>ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Glycine max]
          Length = 169

 Score =  156 bits (395), Expect = 7e-36
 Identities = 80/172 (46%), Positives = 110/172 (63%), Gaps = 3/172 (1%)
 Frame = +3

Query: 243 MGLYSSLNDASPGSIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATEGLFS 422
           MGL + LND S GSIPL ++  IA CVNYLRS++F ++Q +G SRF+S  D +  E   +
Sbjct: 1   MGLQNQLNDVSSGSIPLLVLAQIATCVNYLRSMLFALLQTLGLSRFHS--DQIVDERFLA 58

Query: 423 AMSSGLARLIMVSEQSNNMSGVFCYKSEDRVAEFTYSDN---CVVCLCRLKDGEQVRGLA 593
           A+ SGLA LIM+S+Q   +S  F +      A   +  +   CVVC    +DG+QVR L 
Sbjct: 59  AVGSGLAGLIMLSDQL-TLSSQFFHHHHGTAAGHDHDHDHHPCVVCQATFEDGDQVRMLP 117

Query: 594 CRHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSM 749
           CRHVFH+ C DGW+  H    CPLCRSPL S+ER  + +R++   L++WFS+
Sbjct: 118 CRHVFHRRCFDGWL-HHYKFNCPLCRSPLFSDERVALTERRLGQQLISWFSL 168


>ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|222863870|gb|EEF01001.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  150 bits (380), Expect = 4e-34
 Identities = 82/173 (47%), Positives = 105/173 (60%), Gaps = 3/173 (1%)
 Frame = +3

Query: 243 MGLYSSLNDASPGSIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATEGLFS 422
           MGL + LND S  SIPL L+  IANCV  LRS +F +   +G  R       V  +GL  
Sbjct: 1   MGLQNQLNDVSSESIPLLLIALIANCVACLRSFLFSVFHSVGLHRLDQAH--VMDDGLLG 58

Query: 423 AMSSGLARLIMVSEQSNNMSGVFCYK---SEDRVAEFTYSDNCVVCLCRLKDGEQVRGLA 593
           ++ SG A LI+++EQ   ++ VF YK     D         +CVVCLC L+ G+QVR L 
Sbjct: 59  SIGSGFAGLIVLAEQ-RKLNRVFSYKYCCGGDSNTNDKGGSDCVVCLCTLRHGDQVRRLD 117

Query: 594 CRHVFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 752
           C HVFHK C DGW+ DHLN  CPLCR PLVS+ER +  +R+V  D+V W S+R
Sbjct: 118 CCHVFHKECFDGWL-DHLNFNCPLCRWPLVSDERVEETRRRVGADVVDWLSLR 169


>ref|XP_003638419.1| RING finger protein [Medicago truncatula]
           gi|355504354|gb|AES85557.1| RING finger protein
           [Medicago truncatula] gi|388513305|gb|AFK44714.1|
           unknown [Medicago truncatula]
          Length = 164

 Score =  145 bits (365), Expect = 2e-32
 Identities = 75/170 (44%), Positives = 107/170 (62%)
 Frame = +3

Query: 243 MGLYSSLNDASPGSIPLFLVIFIANCVNYLRSLMFGIVQVMGFSRFYSLGDAVATEGLFS 422
           MGL S LND S  SIPL +++ IA CVNY+RS++   +Q +G SR  +  D +  +   +
Sbjct: 1   MGLQSQLNDVSSDSIPLLVLMHIATCVNYIRSMLLNFLQSIGLSRLQT--DQIVDDHFIA 58

Query: 423 AMSSGLARLIMVSEQSNNMSGVFCYKSEDRVAEFTYSDNCVVCLCRLKDGEQVRGLACRH 602
           A+ SGLA LIM+S+Q  +++  F YK ED  A    +  CV C    ++G+ VR L CRH
Sbjct: 59  AVGSGLAGLIMLSDQL-SLNNQFFYKYED--AASADNHRCVFCQSNFENGDHVRKLPCRH 115

Query: 603 VFHKTCLDGWVFDHLNVTCPLCRSPLVSEERFKVAQRQVAGDLVTWFSMR 752
           VFH+ CL+GW F   N  CPLCR  L S+ER  + +R+V   L++WF++R
Sbjct: 116 VFHRHCLNGW-FHRFNFNCPLCRCSLHSDERVALTERRVGSQLISWFTLR 164