BLASTX nr result

ID: Coptis25_contig00007274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007274
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522549.1| conserved hypothetical protein [Ricinus comm...   197   7e-49
ref|XP_002316836.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-49
ref|XP_002338872.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_002305086.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
emb|CAN64952.1| hypothetical protein VITISV_042281 [Vitis vinifera]   191   5e-47

>ref|XP_002522549.1| conserved hypothetical protein [Ricinus communis]
           gi|223538240|gb|EEF39849.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 551

 Score =  197 bits (501), Expect = 7e-49
 Identities = 93/102 (91%), Positives = 97/102 (95%)
 Frame = +3

Query: 3   KAGILGRISPSPLSEWHAFGIISDGVKDHMMLAGAVGDFTKSLVSKPPSHLWVRQVHFAG 182
           KAGILGRISPSPLSEWHAFGIISDG  +HMMLAGAVGDFTKSLV+ PPSHLWVRQVHFAG
Sbjct: 369 KAGILGRISPSPLSEWHAFGIISDGKTEHMMLAGAVGDFTKSLVANPPSHLWVRQVHFAG 428

Query: 183 LPYLVNMYDRVLVVATGSGICVFLSFLLQPCSAKVCLLWIAK 308
           LPYLVNMYDRVL+VATGSGICVFLSFLLQPC A VCLLW+AK
Sbjct: 429 LPYLVNMYDRVLLVATGSGICVFLSFLLQPCRASVCLLWVAK 470


>ref|XP_002316836.1| predicted protein [Populus trichocarpa] gi|222859901|gb|EEE97448.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score =  197 bits (501), Expect = 7e-49
 Identities = 93/102 (91%), Positives = 97/102 (95%)
 Frame = +3

Query: 3   KAGILGRISPSPLSEWHAFGIISDGVKDHMMLAGAVGDFTKSLVSKPPSHLWVRQVHFAG 182
           KAGILGRISPSPLSEWHAFGIISDG  +HMMLAGAVGDFTKSLVS PPSHLWVRQVHFAG
Sbjct: 363 KAGILGRISPSPLSEWHAFGIISDGKTEHMMLAGAVGDFTKSLVSNPPSHLWVRQVHFAG 422

Query: 183 LPYLVNMYDRVLVVATGSGICVFLSFLLQPCSAKVCLLWIAK 308
           LPYLVNMYDRVL+VATGSGICVFLSFLLQPC A VC+LW+AK
Sbjct: 423 LPYLVNMYDRVLLVATGSGICVFLSFLLQPCRANVCVLWVAK 464


>ref|XP_002338872.1| predicted protein [Populus trichocarpa] gi|222873807|gb|EEF10938.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/102 (90%), Positives = 97/102 (95%)
 Frame = +3

Query: 3   KAGILGRISPSPLSEWHAFGIISDGVKDHMMLAGAVGDFTKSLVSKPPSHLWVRQVHFAG 182
           KAGILGRISPSPLSEWHAFGIISDG  +HMMLAGAVGDFTKSLVS PPSHLWVRQVHFAG
Sbjct: 76  KAGILGRISPSPLSEWHAFGIISDGKTEHMMLAGAVGDFTKSLVSNPPSHLWVRQVHFAG 135

Query: 183 LPYLVNMYDRVLVVATGSGICVFLSFLLQPCSAKVCLLWIAK 308
           LPYLVN+YDRVL+VATGSGICVFLSFLLQPC A VC+LW+AK
Sbjct: 136 LPYLVNLYDRVLLVATGSGICVFLSFLLQPCRASVCVLWVAK 177


>ref|XP_002305086.1| predicted protein [Populus trichocarpa] gi|222848050|gb|EEE85597.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/102 (90%), Positives = 97/102 (95%)
 Frame = +3

Query: 3   KAGILGRISPSPLSEWHAFGIISDGVKDHMMLAGAVGDFTKSLVSKPPSHLWVRQVHFAG 182
           KAGILGRISPSPLSEWHAFGIISDG  +HMMLAGAVGDFTKSLVS PPSHLWVRQVHFAG
Sbjct: 365 KAGILGRISPSPLSEWHAFGIISDGKTEHMMLAGAVGDFTKSLVSNPPSHLWVRQVHFAG 424

Query: 183 LPYLVNMYDRVLVVATGSGICVFLSFLLQPCSAKVCLLWIAK 308
           LPYLVN+YDRVL+VATGSGICVFLSFLLQPC A VC+LW+AK
Sbjct: 425 LPYLVNLYDRVLLVATGSGICVFLSFLLQPCRASVCVLWVAK 466


>emb|CAN64952.1| hypothetical protein VITISV_042281 [Vitis vinifera]
          Length = 552

 Score =  191 bits (485), Expect = 5e-47
 Identities = 88/102 (86%), Positives = 96/102 (94%)
 Frame = +3

Query: 3   KAGILGRISPSPLSEWHAFGIISDGVKDHMMLAGAVGDFTKSLVSKPPSHLWVRQVHFAG 182
           KAGILGRISP PLSEWHAFGIISDG  +HMMLAGAVGDFTKSLVS PPSHLWVRQVHFAG
Sbjct: 370 KAGILGRISPFPLSEWHAFGIISDGKTEHMMLAGAVGDFTKSLVSDPPSHLWVRQVHFAG 429

Query: 183 LPYLVNMYDRVLVVATGSGICVFLSFLLQPCSAKVCLLWIAK 308
           LPYL+NMYD+ ++VATGSGICVFLSFLLQPCSA VCL+W+A+
Sbjct: 430 LPYLINMYDKAMMVATGSGICVFLSFLLQPCSADVCLVWVAR 471


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