BLASTX nr result

ID: Coptis25_contig00007273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007273
         (1360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303377.1| predicted protein [Populus trichocarpa] gi|2...   212   2e-52
ref|XP_003611374.1| hypothetical protein MTR_5g013280 [Medicago ...   160   7e-37
ref|XP_002265335.1| PREDICTED: uncharacterized protein LOC100258...   153   9e-35
ref|XP_002531785.1| conserved hypothetical protein [Ricinus comm...   148   4e-33
ref|XP_004148359.1| PREDICTED: uncharacterized protein LOC101209...   144   4e-32

>ref|XP_002303377.1| predicted protein [Populus trichocarpa] gi|222840809|gb|EEE78356.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  212 bits (540), Expect = 2e-52
 Identities = 113/195 (57%), Positives = 144/195 (73%), Gaps = 1/195 (0%)
 Frame = -1

Query: 928 AIKPGVIHRLQSCFVQAMANLMMKFGV-PGLSIGQGNLPDSFTRGMGMKNMSSMQNPLGN 752
           A+KPG + ++Q+CF++ +  +M K G+ P LSIGQG LP S   G+ M   SS+QNPLGN
Sbjct: 166 AVKPGAVQKMQACFLEVLMKMMTKLGIAPNLSIGQGALPMSLQSGVSMLTESSIQNPLGN 225

Query: 751 VMPLALNTAELTSQGQPGKLNLDMGSTYKSFASKKTLQDTSFGSRTEKVISGFLQSPLLK 572
           +  LA    + TSQ   G  N+   S+ +S  SK +  DTSFGSRTEKVIS FLQ+P+LK
Sbjct: 226 ITQLARKLPDQTSQSLYGYGNVSSHSSSESSTSKGS--DTSFGSRTEKVISSFLQNPILK 283

Query: 571 DEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTEENEKLRQILVEELKVPPSKLLGST 392
           ++G TD+NE+AGRLRSENN+LQMVL+HQQ+IE L EEN+KLRQILVE+LK+PP+KL  S 
Sbjct: 284 EDG-TDINELAGRLRSENNMLQMVLRHQQIIEELMEENQKLRQILVEDLKIPPNKLQASH 342

Query: 391 SGSNYHSPCLDCFEC 347
           S  N  SPC DCFEC
Sbjct: 343 STIN-KSPCTDCFEC 356


>ref|XP_003611374.1| hypothetical protein MTR_5g013280 [Medicago truncatula]
           gi|355512709|gb|AES94332.1| hypothetical protein
           MTR_5g013280 [Medicago truncatula]
          Length = 292

 Score =  160 bits (405), Expect = 7e-37
 Identities = 92/181 (50%), Positives = 119/181 (65%), Gaps = 1/181 (0%)
 Frame = -1

Query: 928 AIKPGVIHRLQSCFVQAMANLMMKFGV-PGLSIGQGNLPDSFTRGMGMKNMSSMQNPLGN 752
           A+KPGV++++QSC V  M  +M+KFG+ P L    G LP S     G  +        G+
Sbjct: 101 AVKPGVLNQIQSCLVMTMTKMMIKFGITPSLPFNLGVLPASLQSATGAVSS-------GS 153

Query: 751 VMPLALNTAELTSQGQPGKLNLDMGSTYKSFASKKTLQDTSFGSRTEKVISGFLQSPLLK 572
           V  LA  +A+  SQG  G   +++G  +   A K T  D+++GSRTEKV++ FLQ+PLLK
Sbjct: 154 VTQLAAKSADQLSQGLAGTQPMNIGLAFDKTAVKDTSVDSTYGSRTEKVLNNFLQNPLLK 213

Query: 571 DEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTEENEKLRQILVEELKVPPSKLLGST 392
            EG     E AGRL +EN +LQMVLKHQQ+IE L EENEKLRQILV+ELKVPPSKL  S+
Sbjct: 214 GEGGGP-TESAGRLIAENKILQMVLKHQQMIEELVEENEKLRQILVKELKVPPSKLEASS 272

Query: 391 S 389
           S
Sbjct: 273 S 273



 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 36/55 (65%), Positives = 37/55 (67%)
 Frame = -3

Query: 1214 RIENPFALKVGQVFTXXXXXXXXXXXXGRPLNLGAIPVLQQVTSAARGATDAFSG 1050
            R  NPF LKVGQVFT            GRPLNLGAIP+L QV SA RGATDAFSG
Sbjct: 11   RFSNPFTLKVGQVFTGFGIGCGVGIGVGRPLNLGAIPMLNQVMSATRGATDAFSG 65


>ref|XP_002265335.1| PREDICTED: uncharacterized protein LOC100258674 [Vitis vinifera]
          Length = 341

 Score =  153 bits (387), Expect = 9e-35
 Identities = 97/232 (41%), Positives = 125/232 (53%), Gaps = 38/232 (16%)
 Frame = -1

Query: 928 AIKPGVIHRLQSCFVQAMANLMMKFGV------------------------PGLS-IGQG 824
           A+KPGV+ ++Q C VQ    +MMKFG+                        P LS  GQG
Sbjct: 105 AVKPGVVQKIQYCIVQTTTKMMMKFGILPNIPIGKDIIPPSLSSTVQGIIPPSLSSTGQG 164

Query: 823 NLPDSFTRGMGMKNMSSMQNPLGNVMPLALNTAELTSQGQPGKLNLDMGSTYKSFASKKT 644
            L  S   GM M N  S QN  G+V+ LA    E TS G  G    + GST  +  SK +
Sbjct: 165 ILSPSLQSGMSMTNEPSSQNTTGSVLQLATKLVEQTSYGLAGDATSNTGSTSGASTSKSS 224

Query: 643 LQDTSFGSRTEKVISGFLQSPLLKDEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTE 464
            Q TS  S+T KV++  L   L   EG  ++NE+A RLRSENN+L ++L H+Q+I+ L E
Sbjct: 225 -QGTSLVSQTGKVVTNILHD-LTSTEGGNEVNELAERLRSENNMLHVILNHEQIIQELKE 282

Query: 463 ENEKLRQILVEELKVPPSKLLGSTSG---------SNY----HSPCLDCFEC 347
           ENEKLRQ+LVE+L +PP KL  S S          S+Y     SPC DCF+C
Sbjct: 283 ENEKLRQVLVEDLNIPPCKLQTSNSSRYTSPSEDCSSYSNRQRSPCEDCFDC 334



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 36/61 (59%), Positives = 39/61 (63%)
 Frame = -3

Query: 1232 GRNVGFRIENPFALKVGQVFTXXXXXXXXXXXXGRPLNLGAIPVLQQVTSAARGATDAFS 1053
            G     RIENPF LKVGQVFT            GRP+N+GAIPV+ QV  A RGATDAFS
Sbjct: 9    GNQPRMRIENPFTLKVGQVFTGFGIGCGVGIGVGRPINMGAIPVVNQVMGATRGATDAFS 68

Query: 1052 G 1050
            G
Sbjct: 69   G 69


>ref|XP_002531785.1| conserved hypothetical protein [Ricinus communis]
           gi|223528578|gb|EEF30599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 305

 Score =  148 bits (373), Expect = 4e-33
 Identities = 89/195 (45%), Positives = 118/195 (60%), Gaps = 1/195 (0%)
 Frame = -1

Query: 928 AIKPGVIHRLQSCFVQAMANLMMKFGV-PGLSIGQGNLPDSFTRGMGMKNMSSMQNPLGN 752
           A+KPGV+ ++Q   ++ +  +M K G+ P LSI QG  P S   G+   +   +QNPLG+
Sbjct: 116 AVKPGVVQKIQFYLMEVITKMMTKVGMSPNLSISQGGFPMSMQSGISTLSGPLIQNPLGS 175

Query: 751 VMPLALNTAELTSQGQPGKLNLDMGSTYKSFASKKTLQDTSFGSRTEKVISGFLQSPLLK 572
           +  LA    + TSQ   G  N+    +Y + AS  +L DT FGSRTEKV+S FLQ+ +LK
Sbjct: 176 ITQLAPQLPDQTSQSMHGFGNMSPRPSYGNSASISSLGDTPFGSRTEKVLSSFLQNSMLK 235

Query: 571 DEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTEENEKLRQILVEELKVPPSKLLGST 392
            E  T+L+EV             VLKHQ+VIE L EENEKLRQIL+E+LK+ PSK   S 
Sbjct: 236 -EDNTNLDEV-------------VLKHQKVIEELMEENEKLRQILMEDLKISPSKFQSSY 281

Query: 391 SGSNYHSPCLDCFEC 347
           S +   S C DCFEC
Sbjct: 282 S-TRTKSTCADCFEC 295



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = -3

Query: 1220 GFRIENPFALKVGQVFTXXXXXXXXXXXXGRPLNLGAIPVLQQVTSAARGATDAFSG 1050
            G +IENPF  K+ QVFT            G+P+NLGA+P++ QV SA RGATDAFSG
Sbjct: 24   GIKIENPFTFKILQVFTGFGFGCGVGIGVGKPMNLGALPMVGQVMSATRGATDAFSG 80


>ref|XP_004148359.1| PREDICTED: uncharacterized protein LOC101209798 [Cucumis sativus]
           gi|449526614|ref|XP_004170308.1| PREDICTED:
           uncharacterized LOC101209798 [Cucumis sativus]
          Length = 310

 Score =  144 bits (364), Expect = 4e-32
 Identities = 82/195 (42%), Positives = 118/195 (60%), Gaps = 1/195 (0%)
 Frame = -1

Query: 928 AIKPGVIHRLQSCFVQAMANLMMKF-GVPGLSIGQGNLPDSFTRGMGMKNMSSMQNPLGN 752
           AIKP  +H++QS  +QAM  +M K    P L I QG +P S      + N S  ++P+ +
Sbjct: 114 AIKPSFLHQVQSSAMQAMEKVMTKLENNPSLPISQGAIPVSLQSASSITNASENEHPIAS 173

Query: 751 VMPLALNTAELTSQGQPGKLNLDMGSTYKSFASKKTLQDTSFGSRTEKVISGFLQSPLLK 572
           +  +A        +     L+   GST ++  S +     S+G+RTEKVI  FLQ+P+ K
Sbjct: 174 IRKIAKEVPGTAPEDLSAYLDTK-GSTLQNALSSR-----SYGTRTEKVIDSFLQNPVFK 227

Query: 571 DEGETDLNEVAGRLRSENNVLQMVLKHQQVIEALTEENEKLRQILVEELKVPPSKLLGST 392
            E +T+L +  GRLR EN++ QMV+ HQ++I+ L EEN KLRQILVE+LK+PPSKL  ++
Sbjct: 228 GE-DTELKDEVGRLRLENHLFQMVIMHQKLIQELREENNKLRQILVEDLKIPPSKLFQAS 286

Query: 391 SGSNYHSPCLDCFEC 347
           +      PC DCFEC
Sbjct: 287 NIGRKIPPCSDCFEC 301



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 33/57 (57%), Positives = 39/57 (68%)
 Frame = -3

Query: 1220 GFRIENPFALKVGQVFTXXXXXXXXXXXXGRPLNLGAIPVLQQVTSAARGATDAFSG 1050
            G RIENPF LKVGQ+FT            GRP+N+GAIP + ++ SA RGATDAFSG
Sbjct: 22   GIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPMNMGAIPGMNELMSATRGATDAFSG 78


Top