BLASTX nr result

ID: Coptis25_contig00007272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007272
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80447.1| hypothetical protein VITISV_013098 [Vitis vinifera]   148   5e-34
ref|XP_002270339.1| PREDICTED: uncharacterized protein LOC100241...   144   6e-33
ref|XP_002330940.1| predicted protein [Populus trichocarpa] gi|1...   135   3e-30
ref|XP_002866597.1| hypothetical protein ARALYDRAFT_496610 [Arab...   134   8e-30
ref|XP_002331268.1| predicted protein [Populus trichocarpa] gi|1...   133   2e-29

>emb|CAN80447.1| hypothetical protein VITISV_013098 [Vitis vinifera]
          Length = 110

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/93 (76%), Positives = 81/93 (87%)
 Frame = -3

Query: 281 LTGMEGGKEERQADGDFPEQPDKSMPSPQEEEEAVKKKYGGIVPKKPPLISKDHERAFFD 102
           ++GME  ++  Q DG+ P+  +KSMPS QEEE AVKK+YGGI+PKKPPLISKDHERA+FD
Sbjct: 1   MSGMENVEQHEQVDGNGPDNAEKSMPSSQEEEAAVKKRYGGIMPKKPPLISKDHERAYFD 60

Query: 101 SADWALGKQGTPVEKPKGPLEALRPKLQPTQQQ 3
           SADWALGKQG  VEKPKGPLEALRPKLQPTQQQ
Sbjct: 61  SADWALGKQG--VEKPKGPLEALRPKLQPTQQQ 91


>ref|XP_002270339.1| PREDICTED: uncharacterized protein LOC100241624 [Vitis vinifera]
           gi|296087204|emb|CBI33578.3| unnamed protein product
           [Vitis vinifera]
          Length = 116

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/90 (77%), Positives = 78/90 (86%)
 Frame = -3

Query: 272 MEGGKEERQADGDFPEQPDKSMPSPQEEEEAVKKKYGGIVPKKPPLISKDHERAFFDSAD 93
           ME  ++  Q DG+ P+  +KSMPS QEEE AVKK+YGGI+PKKPPLISKDHERA+FDSAD
Sbjct: 1   MENVEQHEQVDGNGPDNAEKSMPSSQEEEAAVKKRYGGIMPKKPPLISKDHERAYFDSAD 60

Query: 92  WALGKQGTPVEKPKGPLEALRPKLQPTQQQ 3
           WALGKQG  VEKPKGPLEALRPKLQPTQQQ
Sbjct: 61  WALGKQG--VEKPKGPLEALRPKLQPTQQQ 88


>ref|XP_002330940.1| predicted protein [Populus trichocarpa] gi|118483473|gb|ABK93635.1|
           unknown [Populus trichocarpa]
           gi|118483822|gb|ABK93803.1| unknown [Populus
           trichocarpa] gi|222873134|gb|EEF10265.1| predicted
           protein [Populus trichocarpa]
          Length = 115

 Score =  135 bits (341), Expect = 3e-30
 Identities = 71/91 (78%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
 Frame = -3

Query: 272 MEGGKEERQADGDFPEQPDKS-MPSPQEEEEAVKKKYGGIVPKKPPLISKDHERAFFDSA 96
           ME G  + Q +G+  E  DKS MPS ++EEEAVKKKYGGI+PKKPPLISKDHERAFFDSA
Sbjct: 1   MEDGNMQEQVNGNLSE--DKSCMPSYKQEEEAVKKKYGGIMPKKPPLISKDHERAFFDSA 58

Query: 95  DWALGKQGTPVEKPKGPLEALRPKLQPTQQQ 3
           DWALGKQG   EKPKGPLEALRPKLQPTQQQ
Sbjct: 59  DWALGKQG--AEKPKGPLEALRPKLQPTQQQ 87


>ref|XP_002866597.1| hypothetical protein ARALYDRAFT_496610 [Arabidopsis lyrata subsp.
           lyrata] gi|297312432|gb|EFH42856.1| hypothetical protein
           ARALYDRAFT_496610 [Arabidopsis lyrata subsp. lyrata]
          Length = 118

 Score =  134 bits (337), Expect = 8e-30
 Identities = 64/85 (75%), Positives = 73/85 (85%)
 Frame = -3

Query: 257 EERQADGDFPEQPDKSMPSPQEEEEAVKKKYGGIVPKKPPLISKDHERAFFDSADWALGK 78
           +E+   G+   + +KSMPS Q+EE AVKKKYGG++PKKPPLISKDHERA+FDSADWALGK
Sbjct: 8   KEQSVQGNLTNEAEKSMPSSQQEEAAVKKKYGGLMPKKPPLISKDHERAYFDSADWALGK 67

Query: 77  QGTPVEKPKGPLEALRPKLQPTQQQ 3
           QG  V KPKGPLEALRPKLQPTQQQ
Sbjct: 68  QG--VAKPKGPLEALRPKLQPTQQQ 90


>ref|XP_002331268.1| predicted protein [Populus trichocarpa] gi|118485324|gb|ABK94521.1|
           unknown [Populus trichocarpa]
           gi|222873693|gb|EEF10824.1| predicted protein [Populus
           trichocarpa]
          Length = 114

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/90 (75%), Positives = 76/90 (84%)
 Frame = -3

Query: 272 MEGGKEERQADGDFPEQPDKSMPSPQEEEEAVKKKYGGIVPKKPPLISKDHERAFFDSAD 93
           ME  K++ Q DG+  E    SMPS ++EEE VKKKYGGI+PKKPPLISKDHERA+FDSAD
Sbjct: 1   MEDNKQD-QVDGNLSEDKS-SMPSSKQEEEVVKKKYGGILPKKPPLISKDHERAYFDSAD 58

Query: 92  WALGKQGTPVEKPKGPLEALRPKLQPTQQQ 3
           WALGKQG  V+KPKGPLEALRPKLQPTQQQ
Sbjct: 59  WALGKQG--VDKPKGPLEALRPKLQPTQQQ 86


Top