BLASTX nr result
ID: Coptis25_contig00007269
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00007269
(1640 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518819.1| DNA binding protein, putative [Ricinus commu... 549 e-154
ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vit... 545 e-152
ref|XP_003536185.1| PREDICTED: PHD finger protein At1g33420-like... 527 e-147
ref|XP_003555537.1| PREDICTED: PHD finger protein At1g33420-like... 520 e-145
ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|2... 520 e-145
>ref|XP_002518819.1| DNA binding protein, putative [Ricinus communis]
gi|223542200|gb|EEF43744.1| DNA binding protein, putative
[Ricinus communis]
Length = 677
Score = 549 bits (1415), Expect = e-154
Identities = 268/428 (62%), Positives = 325/428 (75%), Gaps = 7/428 (1%)
Frame = +2
Query: 269 MVVNGRPLKRMKTRVTADLNDFLTFPNSSNELFGPFRSNVRVFLSKHAR-PPPSFLNPQL 445
MVVN RPLKRMK RVTADL DFLTFP+ GPFR+N++ FL +HA PPPS L P L
Sbjct: 1 MVVNCRPLKRMKRRVTADLCDFLTFPSGFESPRGPFRTNIKSFLMEHALFPPPSSLFPHL 60
Query: 446 --WQVFFRIGDLTDPRDSSLPQIVTLDIIEEDVARSRSVYCDQCRVVGWSGHPVCAKRYH 619
WQ+ FR+GDLTD DSS P +V+LDI+EEDVARSRSVYCDQCRVVGWSGHPVC KRYH
Sbjct: 61 MTWQISFRVGDLTDGLDSS-PAVVSLDIVEEDVARSRSVYCDQCRVVGWSGHPVCCKRYH 119
Query: 620 FIIRRDHSSNELAYQKPCSNCGSLLHLSDFKCKSCNYMLTVLDLQEWIYLQLEDTTHLLH 799
FII+ D +S Y+KPC+ C +LH+S+ +CK CN++ T D+++W+Y QLEDTTHLLH
Sbjct: 120 FIIKADGNSIG-GYRKPCTCCAYVLHVSELRCKICNHVTTTDDVEDWVYHQLEDTTHLLH 178
Query: 800 GVVHSNGYGHLLRVNGREGGSNFLSGCDIMSFWDRLCKTLGARKISVMDVSKKYGLEYRL 979
GVVH+NGYGHLLRVNGREGGS LSGC IM FWDRLCKTLG RK+SVMDVSKKYGLEYRL
Sbjct: 179 GVVHANGYGHLLRVNGREGGSRILSGCHIMDFWDRLCKTLGVRKVSVMDVSKKYGLEYRL 238
Query: 980 LHAITSGHPWYGDWGFEFGTGSFALTLEAYRKAVDCLSEIPLSLFY-QARTPRTRLQDVI 1156
LHAI GHPWYGDWG+EFG GSFALT++AY+ AV+ LS IPLS+F Q RT LQDVI
Sbjct: 239 LHAIIKGHPWYGDWGYEFGAGSFALTVDAYKSAVETLSSIPLSIFLSQGGKLRTHLQDVI 298
Query: 1157 TFYQALSECRLLTIKDLFCFLMGLI---HKTKQLQITSKGKNYETCSLVMCTWTREDILR 1327
+FYQ+LS+C L+ +DLFC+L+ LI HK+ S T + V +W + D+ R
Sbjct: 299 SFYQSLSDCELVNTRDLFCYLINLIRDAHKSSSRVEDSTSSKCNTITGVSSSWPKNDVER 358
Query: 1328 VQQSMIKVLQVAGGSCWVPWRALKGAACRLGSSELLDYCLKVLGGKVLDDGRMVLSRCNP 1507
V+++M++VL+ S WV WRAL+GA C++ LLD+CLK LGGK DG +V +RCNP
Sbjct: 359 VEEAMLRVLKAVSESTWVSWRALRGAVCKVAPPNLLDHCLKELGGKAAADGMIVGTRCNP 418
Query: 1508 ELDAIEYR 1531
+ A EYR
Sbjct: 419 DSGAFEYR 426
>ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vitis vinifera]
gi|296084820|emb|CBI27702.3| unnamed protein product
[Vitis vinifera]
Length = 692
Score = 545 bits (1403), Expect = e-152
Identities = 267/434 (61%), Positives = 326/434 (75%), Gaps = 11/434 (2%)
Frame = +2
Query: 269 MVVNGRPLKRMKTRVTADLNDFLTFPNSSNELFGPFRSNVRVFLSKHAR-PPPSFLNPQL 445
MVVNGRP+KRMK RVTADL DFL FP + + GPFR+ V+ FL+KHA PPP L P L
Sbjct: 1 MVVNGRPMKRMKMRVTADLYDFLAFPAAGDFAEGPFRTTVKSFLTKHALLPPPGSLLPHL 60
Query: 446 --WQVFFRIGDLTDPRDSSLPQIVTLDIIEEDVARSRSVYCDQCRVVGWSGHPVCAKRYH 619
WQ++FR+G+ S P +V LD++EEDVARSRSVYCDQCRVVGWSG+PVC KRYH
Sbjct: 61 LTWQIWFRVGEAVVDGGESSPAVVCLDVVEEDVARSRSVYCDQCRVVGWSGNPVCTKRYH 120
Query: 620 FIIRRDHSSNELAYQKPCSNCGSLLHLSDFKCKSCNYMLTVLDLQEWIYLQLEDTTHLLH 799
FII+ D +S Y K C++CG +LHLSD +CKSCN ++T D ++W+Y QL+DTTHLLH
Sbjct: 121 FIIKADGNSIG-GYYKSCTSCGVVLHLSDSRCKSCNKLMTADDTEDWVYHQLDDTTHLLH 179
Query: 800 GVVHSNGYGHLLRVNGREGGSNFLSGCDIMSFWDRLCKTLGARKISVMDVSKKYGLEYRL 979
GVVH+NGYGHLLRVNGREGGS LSGC IM FWDRLCK LG RK+SVMDVSKK+GLE+RL
Sbjct: 180 GVVHANGYGHLLRVNGREGGSRILSGCHIMDFWDRLCKNLGVRKVSVMDVSKKHGLEFRL 239
Query: 980 LHAITSGHPWYGDWGFEFGTGSFALTLEAYRKAVDCLSEIPLSLFY-QARTPRTRLQDVI 1156
LHAIT GHPWYG+WG+EFG GSFALTL+AY+ AV+ LS +PLS+F Q R PRT LQD+I
Sbjct: 240 LHAITKGHPWYGEWGYEFGAGSFALTLDAYKAAVETLSTLPLSIFVSQGRKPRTHLQDLI 299
Query: 1157 TFYQALSECRLLTIKDLFCFLMGLIHKTKQLQITSKGKNYETCSL-------VMCTWTRE 1315
++YQ+LSE L+ +DLF FLM LIH + +S KN TC ++C WTR
Sbjct: 300 SYYQSLSERELVHARDLFWFLMSLIHDAHK---SSPTKNDITCKKRRSCTPGILCAWTRN 356
Query: 1316 DILRVQQSMIKVLQVAGGSCWVPWRALKGAACRLGSSELLDYCLKVLGGKVLDDGRMVLS 1495
DI RV+++M +VL+ GS WV WRAL+GA C++ ELLDYCLK LGGK+ G +V
Sbjct: 357 DIERVEEAMFRVLRAVTGSNWVSWRALRGAVCKVAPPELLDYCLKELGGKLTSYGVVVQV 416
Query: 1496 RCNPELDAIEYR*D 1537
RCNP+ A+EYR D
Sbjct: 417 RCNPDSGAVEYRLD 430
>ref|XP_003536185.1| PREDICTED: PHD finger protein At1g33420-like [Glycine max]
Length = 707
Score = 527 bits (1357), Expect = e-147
Identities = 267/438 (60%), Positives = 325/438 (74%), Gaps = 13/438 (2%)
Frame = +2
Query: 269 MVVNGRPLKRM-KTRVTADLNDFLTFPNSS-----NELFGPFRSNVRVFLSKHAR-PPPS 427
+V G+ LKR K RVTAD DFLTFP S N GPFRSNVR FL+KHA PPPS
Sbjct: 2 VVSGGKGLKRAAKKRVTADFYDFLTFPTPSLAEAENFAGGPFRSNVRAFLTKHALLPPPS 61
Query: 428 FLNPQL--WQVFFRIGDLTDPRDSSLPQIVTLDIIEEDVARSRSVYCDQCRVVGWSGHPV 601
L P L WQ+ FR+G+LT+ D+ +V LD++EEDVARSRSVYCDQCRV GWSGHPV
Sbjct: 62 ALFPHLLTWQIVFRVGELTEGPDAP---VVCLDVVEEDVARSRSVYCDQCRVFGWSGHPV 118
Query: 602 CAKRYHFIIRRDHSSNELAYQKPCSNCGSLLHLSDFKCKSCNYMLTVLDLQEWIYLQLED 781
C KRYHFII+ D SS Y KPC CG +LHLS+ KCKSCN++ T D+++W+Y QLE+
Sbjct: 119 CGKRYHFIIKADGSSIG-GYHKPCMCCGDILHLSESKCKSCNHVTTTDDVEDWVYHQLEN 177
Query: 782 TTHLLHGVVHSNGYGHLLRVNGREGGSNFLSGCDIMSFWDRLCKTLGARKISVMDVSKKY 961
TTHLLHGVVH+NGYGHLLRVNGREGGS FLSG IM FWDRLCKTLG RK+SVMDVSKKY
Sbjct: 178 TTHLLHGVVHTNGYGHLLRVNGREGGSRFLSGIHIMDFWDRLCKTLGVRKVSVMDVSKKY 237
Query: 962 GLEYRLLHAITSGHPWYGDWGFEFGTGSFALTLEAYRKAVDCLSEIPLSLFYQARTPRTR 1141
G+EYRLLHAI GHPWYGDWG++FG+GS+ LT E+Y+ AV+ LS +PLS F Q + P +R
Sbjct: 238 GIEYRLLHAIMKGHPWYGDWGYKFGSGSYCLTHESYKSAVESLSNLPLSTFSQGKMPDSR 297
Query: 1142 LQDVITFYQALSECRLLTIKDLFCFLMGLI---HKT-KQLQITSKGKNYETCSLVMCTWT 1309
+QD+I +YQ+LSE L+ I+DLFCF+MGLI HKT + T+ K S + +W
Sbjct: 298 VQDMIKYYQSLSEHELVNIRDLFCFIMGLIGDAHKTASNVDETTCKKRRFNASGLSISWD 357
Query: 1310 REDILRVQQSMIKVLQVAGGSCWVPWRALKGAACRLGSSELLDYCLKVLGGKVLDDGRMV 1489
+ DI RV+Q+MI+VL+ S WV WRAL+GAA +LGS ELLDYCL LGGK++ G +V
Sbjct: 358 KSDIERVEQAMIRVLRAVSESKWVSWRALRGAASKLGSPELLDYCLGELGGKMVYGGMVV 417
Query: 1490 LSRCNPELDAIEYR*DIA 1543
SRCNP+ E+R + A
Sbjct: 418 NSRCNPQTGVYEFRVEAA 435
>ref|XP_003555537.1| PREDICTED: PHD finger protein At1g33420-like [Glycine max]
Length = 699
Score = 520 bits (1339), Expect = e-145
Identities = 265/437 (60%), Positives = 321/437 (73%), Gaps = 14/437 (3%)
Frame = +2
Query: 269 MVVNGRPLKRM-KTRVTADLNDFLTFPN-----SSNELFGPFRSNVRVFLSKHAR-PPPS 427
+V G+ LKR K RVTAD DFLTFP S N GPFRSNVR FL+KHA PPPS
Sbjct: 2 VVSGGKGLKRAAKKRVTADFYDFLTFPTPALAESENFAGGPFRSNVRAFLTKHALLPPPS 61
Query: 428 FLNPQL--WQVFFRIGDLTDPRDSSLPQIVTLDIIEEDVARSRSVYCDQCRVVGWSGHPV 601
L P L WQ+ FR+G+LT+ D+ V LD++EEDVARSRSVYCDQCRV GWSGHPV
Sbjct: 62 ALFPHLLTWQIVFRVGELTEGPDAPA---VCLDVVEEDVARSRSVYCDQCRVFGWSGHPV 118
Query: 602 CAKRYHFIIRRDHSSNELAYQKPCSNCGSLLHLSDFKCKSCNYMLTVLDLQEWIYLQLED 781
C KRYHFII+ D SS Y KPC CG +LHLS+ KCKSCN++ T D+++W+Y QLE+
Sbjct: 119 CGKRYHFIIKADGSSIG-GYHKPCMCCGDILHLSESKCKSCNHVTTTDDVEDWVYHQLEN 177
Query: 782 TTHLLHGVVHSNGYGHLLRVNGREGGSNFLSGCDIMSFWDRLCKTLGARKISVMDVSKKY 961
TTHLLHGVVH+NGYGHLLRVNGREGGS FLSG IM FWDRLCKTLG RK+SVMDVSKKY
Sbjct: 178 TTHLLHGVVHANGYGHLLRVNGREGGSRFLSGIHIMDFWDRLCKTLGVRKVSVMDVSKKY 237
Query: 962 GLEYRLLHAITSGHPWYGDWGFEFGTGSFALTLEAYRKAVDCLSEIPLSLFYQARTPRTR 1141
G+EYR+LHAI GHPWYGDWG++FG+GS+ LT EAY+ AV+ LS +PLS F R P +R
Sbjct: 238 GIEYRMLHAIMKGHPWYGDWGYKFGSGSYCLTHEAYKSAVESLSNLPLSTFSHGRMPNSR 297
Query: 1142 LQDVITFYQALSECRLLTIKDLFCFLMGLI---HKTKQL--QITSKGKNYETCSLVMCTW 1306
++D+I +YQ+LSE L+ I+DLFCF+MGLI HKT + T K + + L M +W
Sbjct: 298 VEDMIKYYQSLSEHELVNIRDLFCFIMGLIGDAHKTASNVDETTCKKRCFNASGLSM-SW 356
Query: 1307 TREDILRVQQSMIKVLQVAGGSCWVPWRALKGAACRLGSSELLDYCLKVLGGKVLDDGRM 1486
+ I RV+Q+MI+VL S WV WRAL+GAA +LGS ELLDYCL LGGK++ G +
Sbjct: 357 DKSGIERVEQAMIRVLCAVSESKWVSWRALRGAASKLGSPELLDYCLGELGGKMVYGGMV 416
Query: 1487 VLSRCNPELDAIEYR*D 1537
V S+CNP+ E+R D
Sbjct: 417 VNSQCNPQTGVYEFRLD 433
>ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|222848314|gb|EEE85861.1|
predicted protein [Populus trichocarpa]
Length = 688
Score = 520 bits (1339), Expect = e-145
Identities = 257/444 (57%), Positives = 321/444 (72%), Gaps = 23/444 (5%)
Frame = +2
Query: 269 MVVNGRPLKRMKTRVTADLNDFLTFPNSSNELF--------------GPFRSNVRVFLSK 406
MVVNGRP+KRMK RVTADL +FLTFP SS+ GPFRSNVR FL++
Sbjct: 1 MVVNGRPIKRMKRRVTADLYNFLTFPASSSSSSSSSSSSSSSLPPPRGPFRSNVRSFLTE 60
Query: 407 HAR-PPPSFLNPQL--WQVFFRIGDLTDPRDSSLPQ-IVTLDIIEEDVARSRSVYCDQCR 574
HA PPPS L P L WQ+ FR+GDL + +V+LD++EEDVARSR+VYCDQCR
Sbjct: 61 HALLPPPSSLFPHLLTWQISFRVGDLVESGGGEAGSAVVSLDVVEEDVARSRTVYCDQCR 120
Query: 575 VVGWSGHPVCAKRYHFIIRRDHSSNELAYQKPCSNCGSLLHLSDFKCKSCNYMLTVLDLQ 754
VVGWS HPVC+KRYHFII+ D +S Y KPC+ CG +LHLS+ +CK+C++++T D++
Sbjct: 121 VVGWSEHPVCSKRYHFIIKGDGNSIG-GYHKPCTCCGDILHLSESRCKACDHVITADDVE 179
Query: 755 EWIYLQLEDTTHLLHGVVHSNGYGHLLRVNGREGGSNFLSGCDIMSFWDRLCKTLGARKI 934
EW+Y QLEDTTHLLHGV+H+NGYGHLLRVNG+EGGS LSGC IM FWDRLCK+LG RK+
Sbjct: 180 EWVYHQLEDTTHLLHGVIHANGYGHLLRVNGKEGGSRVLSGCHIMDFWDRLCKSLGVRKV 239
Query: 935 SVMDVSKKYGLEYRLLHAITSGHPWYGDWGFEFGTGSFALTLEAYRKAVDCLSEIPLSLF 1114
SVMDVSKKYG+EYRLLHAIT GH WYGDWG+EFG GSF LT++AY+ AV+ LS +P+S+F
Sbjct: 240 SVMDVSKKYGIEYRLLHAITKGHSWYGDWGYEFGAGSFGLTVDAYKPAVETLSSLPVSIF 299
Query: 1115 Y-QARTPRTRLQDVITFYQALSECRLLTIKDLFCFLMGLIHKTKQLQITSKGKNYETCSL 1291
+ + TRLQD I FYQ+LS+ L+ +DLFC+L LIH + + + C
Sbjct: 300 LSEGQKTHTRLQDTIKFYQSLSDHELVNTRDLFCYLTSLIHDAHKSTSGVDDSSCKKCPF 359
Query: 1292 ----VMCTWTREDILRVQQSMIKVLQVAGGSCWVPWRALKGAACRLGSSELLDYCLKVLG 1459
+ +WTR DI RV+++M +VL+ GS WV WRAL+GA ++ ELLD+CLK LG
Sbjct: 360 YAPGISPSWTRGDIERVEEAMFRVLRAVSGSNWVSWRALRGAVFKVAPPELLDHCLKELG 419
Query: 1460 GKVLDDGRMVLSRCNPELDAIEYR 1531
GK DG +V SRCNP A EYR
Sbjct: 420 GKFAADGMIVSSRCNPSSGAFEYR 443