BLASTX nr result

ID: Coptis25_contig00007264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007264
         (4791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140152.1| PREDICTED: cyclin-T1-4-like [Cucumis sativus]     228   9e-57
emb|CBI26220.3| unnamed protein product [Vitis vinifera]              228   2e-56
ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]           228   2e-56
ref|XP_004164165.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-T1-4-...   226   6e-56
emb|CAN71612.1| hypothetical protein VITISV_012971 [Vitis vinifera]   226   6e-56

>ref|XP_004140152.1| PREDICTED: cyclin-T1-4-like [Cucumis sativus]
          Length = 378

 Score =  228 bits (582), Expect = 9e-57
 Identities = 110/137 (80%), Positives = 125/137 (91%)
 Frame = -3

Query: 4789 GMRLELPQTTIGTAMVLCHRFFVRRSHASHDRFMVATAALFLAAKSEETARPLNDVLRAS 4610
            G++LELPQTTIGTAM+LCHRFFVRRSHA HDRF++AT+ALFLAAKSEET RPLN+VLRAS
Sbjct: 184  GLQLELPQTTIGTAMILCHRFFVRRSHACHDRFLIATSALFLAAKSEETPRPLNNVLRAS 243

Query: 4609 CEICHKQGLNFFPSLLPVDWFEQYRERVTDAEQMILTTLNFELNVQHPYDPLTSVLSKLG 4430
            CEI HKQ  N    +LPVDWFEQYRERVT+AEQ+ILTTLNFELNVQHPY PL SVL+K+G
Sbjct: 244  CEILHKQDFNVLSYMLPVDWFEQYRERVTEAEQLILTTLNFELNVQHPYAPLMSVLNKIG 303

Query: 4429 LSQTVLVNLALCLVSEG 4379
            LSQ++LVNLAL L+SEG
Sbjct: 304  LSQSILVNLALNLISEG 320


>emb|CBI26220.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  228 bits (580), Expect = 2e-56
 Identities = 114/137 (83%), Positives = 124/137 (90%)
 Frame = -3

Query: 4789 GMRLELPQTTIGTAMVLCHRFFVRRSHASHDRFMVATAALFLAAKSEETARPLNDVLRAS 4610
            G+RLELPQTTIGTAMVLCHRFFVRRSHA HDRF++ATA+LFLAAKSEET RPLN+V+RAS
Sbjct: 169  GLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFLIATASLFLAAKSEETQRPLNNVVRAS 228

Query: 4609 CEICHKQGLNFFPSLLPVDWFEQYRERVTDAEQMILTTLNFELNVQHPYDPLTSVLSKLG 4430
            CEI HK  L F   LLPVDWFEQYRERV +AEQMILTTL+FEL V+HPY PLTSVL+KLG
Sbjct: 229  CEILHKLDLTFLSYLLPVDWFEQYRERVIEAEQMILTTLDFELTVEHPYVPLTSVLNKLG 288

Query: 4429 LSQTVLVNLALCLVSEG 4379
            LSQTVLVNLAL LVSEG
Sbjct: 289  LSQTVLVNLALHLVSEG 305


>ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]
          Length = 363

 Score =  228 bits (580), Expect = 2e-56
 Identities = 114/137 (83%), Positives = 124/137 (90%)
 Frame = -3

Query: 4789 GMRLELPQTTIGTAMVLCHRFFVRRSHASHDRFMVATAALFLAAKSEETARPLNDVLRAS 4610
            G+RLELPQTTIGTAMVLCHRFFVRRSHA HDRF++ATA+LFLAAKSEET RPLN+V+RAS
Sbjct: 169  GLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFLIATASLFLAAKSEETQRPLNNVVRAS 228

Query: 4609 CEICHKQGLNFFPSLLPVDWFEQYRERVTDAEQMILTTLNFELNVQHPYDPLTSVLSKLG 4430
            CEI HK  L F   LLPVDWFEQYRERV +AEQMILTTL+FEL V+HPY PLTSVL+KLG
Sbjct: 229  CEILHKLDLTFLSYLLPVDWFEQYRERVIEAEQMILTTLDFELTVEHPYVPLTSVLNKLG 288

Query: 4429 LSQTVLVNLALCLVSEG 4379
            LSQTVLVNLAL LVSEG
Sbjct: 289  LSQTVLVNLALHLVSEG 305


>ref|XP_004164165.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-T1-4-like [Cucumis sativus]
          Length = 378

 Score =  226 bits (575), Expect = 6e-56
 Identities = 109/137 (79%), Positives = 124/137 (90%)
 Frame = -3

Query: 4789 GMRLELPQTTIGTAMVLCHRFFVRRSHASHDRFMVATAALFLAAKSEETARPLNDVLRAS 4610
            G++LELPQTTIGTAM+LCHR FVRRSHA HDRF++AT+ALFLAAKSEET RPLN+VLRAS
Sbjct: 184  GLQLELPQTTIGTAMILCHRXFVRRSHACHDRFLIATSALFLAAKSEETPRPLNNVLRAS 243

Query: 4609 CEICHKQGLNFFPSLLPVDWFEQYRERVTDAEQMILTTLNFELNVQHPYDPLTSVLSKLG 4430
            CEI HKQ  N    +LPVDWFEQYRERVT+AEQ+ILTTLNFELNVQHPY PL SVL+K+G
Sbjct: 244  CEILHKQDFNVLSYMLPVDWFEQYRERVTEAEQLILTTLNFELNVQHPYAPLMSVLNKIG 303

Query: 4429 LSQTVLVNLALCLVSEG 4379
            LSQ++LVNLAL L+SEG
Sbjct: 304  LSQSILVNLALNLISEG 320


>emb|CAN71612.1| hypothetical protein VITISV_012971 [Vitis vinifera]
          Length = 443

 Score =  226 bits (575), Expect = 6e-56
 Identities = 113/137 (82%), Positives = 123/137 (89%)
 Frame = -3

Query: 4789 GMRLELPQTTIGTAMVLCHRFFVRRSHASHDRFMVATAALFLAAKSEETARPLNDVLRAS 4610
            G+RLE PQTTIGTAMVLCHRFFVRRSHA HDRF++ATA+LFLAAKSEET RPLN+V+RAS
Sbjct: 169  GLRLEXPQTTIGTAMVLCHRFFVRRSHACHDRFLIATASLFLAAKSEETQRPLNNVVRAS 228

Query: 4609 CEICHKQGLNFFPSLLPVDWFEQYRERVTDAEQMILTTLNFELNVQHPYDPLTSVLSKLG 4430
            CEI HK  L F   LLPVDWFEQYRERV +AEQMILTTL+FEL V+HPY PLTSVL+KLG
Sbjct: 229  CEILHKLDLTFLSYLLPVDWFEQYRERVIEAEQMILTTLDFELTVEHPYVPLTSVLNKLG 288

Query: 4429 LSQTVLVNLALCLVSEG 4379
            LSQTVLVNLAL LVSEG
Sbjct: 289  LSQTVLVNLALHLVSEG 305


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