BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007251
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244...   274   3e-71
emb|CBI18563.3| unnamed protein product [Vitis vinifera]              269   1e-69
ref|XP_002522340.1| zinc finger protein, putative [Ricinus commu...   261   2e-67
ref|XP_002310753.1| f-box family protein [Populus trichocarpa] g...   258   2e-66
emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]   246   7e-63

>ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244391 [Vitis vinifera]
          Length = 332

 Score =  274 bits (700), Expect = 3e-71
 Identities = 154/281 (54%), Positives = 173/281 (61%), Gaps = 2/281 (0%)
 Frame = +3

Query: 126 AEHLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTI 305
           +E+LRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T 
Sbjct: 61  SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTS 120

Query: 306 XXXXXXXXXXXXXXXXXXDIVKSSLGSGFDQEQPSNPILWGSPQNPQSQLLAFLRATXXX 485
                             +I KS LG GFD E PSNPILW SPQN  S LLA LRAT   
Sbjct: 121 VSTAVGKSSAGKAKSAVSEIGKSGLGGGFDHEIPSNPILWASPQN--SHLLALLRAT-QN 177

Query: 486 XXXXXXXXXXXXXXKDEGHMIGSHVSLESAAVTGALN-ARTIGLDSLGQVPT-GLYNSIF 659
                         KD+G MIGSH++ ES   TGA+N AR +GLD L Q+P+ GL +S +
Sbjct: 178 PNPNPSPISNSVTVKDDGVMIGSHMTSESGVGTGAVNIARNMGLDHLNQLPSIGLCSSYW 237

Query: 660 RNNIXXXXXXXXXXXXXXXXXXXXSHGDAQNTGIQELYQSLRSSVNYYPDQSSATTTNLT 839
           RNN                       G+ QNTGIQELYQ LRSS NYY D S    +N  
Sbjct: 238 RNNQHQTQQHQQNSHHQQQNGFIL--GEVQNTGIQELYQRLRSSTNYYTDHSPVVLSNAV 295

Query: 840 SMPTSSSSIMEPTVIAGGEFNCWNPQFSWSSVQAATNGTFP 962
           S   SSSSI+E   IAGGE   WNP FSWS +   TNG +P
Sbjct: 296 S---SSSSILESAPIAGGELGYWNPTFSWSDL-PTTNGAYP 332


>emb|CBI18563.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  269 bits (687), Expect = 1e-69
 Identities = 154/298 (51%), Positives = 176/298 (59%), Gaps = 19/298 (6%)
 Frame = +3

Query: 126  AEHLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTI 305
            +E+LRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T 
Sbjct: 134  SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTS 193

Query: 306  XXXXXXXXXXXXXXXXXXDIVKSSLGSGFDQEQPSNPILWGSPQNPQSQLLAFLRATXXX 485
                              +I KS LG GFD E PSNPILW SPQN  S LLA LRAT   
Sbjct: 194  VSTAVGKSSAGKAKSAVSEIGKSGLGGGFDHEIPSNPILWASPQN--SHLLALLRAT-QN 250

Query: 486  XXXXXXXXXXXXXXKDEGHMIGSHVSLESAAVTGALN-ARTIGLDSLGQVPT-GLYNSIF 659
                          KD+G MIGSH++ ES   TGA+N AR +GLD L Q+P+ GL +S +
Sbjct: 251  PNPNPSPISNSVTVKDDGVMIGSHMTSESGVGTGAVNIARNMGLDHLNQLPSIGLCSSYW 310

Query: 660  RNNIXXXXXXXXXXXXXXXXXXXXSHGDAQNTGIQELYQSLRSSVNYYPDQSSATTTN-- 833
            RNN                       G+ QNTGIQELYQ LRSS NYY D S    +N  
Sbjct: 311  RNNQHQTQQHQQNSHHQQQNGFIL--GEVQNTGIQELYQRLRSSTNYYTDHSPVVLSNAV 368

Query: 834  ---------------LTSMPTSSSSIMEPTVIAGGEFNCWNPQFSWSSVQAATNGTFP 962
                           L++  +SSSSI+E   IAGGE   WNP FSWS +   TNG +P
Sbjct: 369  SSSSSILESAPIAGVLSNAVSSSSSILESAPIAGGELGYWNPTFSWSDL-PTTNGAYP 425


>ref|XP_002522340.1| zinc finger protein, putative [Ricinus communis]
           gi|223538418|gb|EEF40024.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 335

 Score =  261 bits (667), Expect = 2e-67
 Identities = 141/282 (50%), Positives = 173/282 (61%), Gaps = 3/282 (1%)
 Frame = +3

Query: 126 AEHLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTI 305
           +E+LRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T+
Sbjct: 66  SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTV 125

Query: 306 XXXXXXXXXXXXXXXXXXDIVKSSLGSGFDQEQP-SNPILWGSPQNPQSQLLAFLRATXX 482
                             +I +SS G+ FD E P S+PI+W SP N  S LL  LRA   
Sbjct: 126 VSASVAKSSNNKMKTMVSEIGRSSFGNVFDHELPSSSPIMWASPHN--SHLLTLLRANHN 183

Query: 483 XXXXXXXXXXXXXXXKDEGHMIGSHVSLESAAVTGALNARTIGLDSLGQVPT-GLYNSIF 659
                          ++ G MIG+ +  E+   TGALNART+G+D L QVP+ GL +  +
Sbjct: 184 PNPNSTTLSNSLGVKEETGCMIGTQMMAETTGATGALNARTLGMDHLSQVPSLGLCSPFW 243

Query: 660 RNNIXXXXXXXXXXXXXXXXXXXXSHGDAQNTGIQELYQSLRSSVN-YYPDQSSATTTNL 836
           +N+                       G+AQN+GIQELYQ LRSS N YY D SS   +N+
Sbjct: 244 KNSQNQAQHHQQNGFIV---------GEAQNSGIQELYQRLRSSTNTYYTDNSSVVLSNV 294

Query: 837 TSMPTSSSSIMEPTVIAGGEFNCWNPQFSWSSVQAATNGTFP 962
            S  TSSS+I+E + +AGGE   WNP FSWS +   TNG +P
Sbjct: 295 GSSSTSSSNILESSPVAGGELGYWNPTFSWSDL-PTTNGAYP 335


>ref|XP_002310753.1| f-box family protein [Populus trichocarpa]
           gi|118482074|gb|ABK92968.1| unknown [Populus
           trichocarpa] gi|222853656|gb|EEE91203.1| f-box family
           protein [Populus trichocarpa]
          Length = 323

 Score =  258 bits (658), Expect = 2e-66
 Identities = 141/281 (50%), Positives = 170/281 (60%), Gaps = 3/281 (1%)
 Frame = +3

Query: 129 EHLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTIX 308
           E+LRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T  
Sbjct: 63  ENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSV 122

Query: 309 XXXXXXXXXXXXXXXXXDIVKSSLGSGFDQEQPSNPILWGSPQNPQSQLLAFLRATXXXX 488
                            DI +S  G+GF+ E  S+PI+W SPQN  S +LA LRAT    
Sbjct: 123 SASVGKSGTNKMKTMASDIGRSGFGNGFEHELSSSPIMWASPQN--SHILALLRAT---Q 177

Query: 489 XXXXXXXXXXXXXKDEGHMIGSHVSLESAAVTGALNARTIGLDSLGQVPT-GLYNSIFRN 665
                        K+EG +IG+    E    T ALNART+GLD + QVP+ GL +  +++
Sbjct: 178 NPNPSTLSNSIFVKEEGGLIGNQFISEPGVGTAALNARTLGLDPISQVPSLGLCSPFWKS 237

Query: 666 NIXXXXXXXXXXXXXXXXXXXXSHGDAQNTGIQELYQSLRSSVNYYPDQSSATTTN--LT 839
           N                     + G+AQN+GIQELYQ LRSS NYY D  SA   +   T
Sbjct: 238 N--------------QHQQNGFTVGEAQNSGIQELYQRLRSSTNYYTDNPSAIVLSNVAT 283

Query: 840 SMPTSSSSIMEPTVIAGGEFNCWNPQFSWSSVQAATNGTFP 962
           S  TS+S+I+E   +AGGE   WNP FSWS +   TNG +P
Sbjct: 284 SSSTSTSTILESAPVAGGELGYWNPAFSWSDL-PTTNGAYP 323


>emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]
          Length = 309

 Score =  246 bits (628), Expect = 7e-63
 Identities = 143/279 (51%), Positives = 157/279 (56%)
 Frame = +3

Query: 126 AEHLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTI 305
           +E+LRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T 
Sbjct: 61  SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTS 120

Query: 306 XXXXXXXXXXXXXXXXXXDIVKSSLGSGFDQEQPSNPILWGSPQNPQSQLLAFLRATXXX 485
                             +I KS LG GFD E PSNPILW SPQN  S LLA LRAT   
Sbjct: 121 VSTAVGKSSAGKAKSAVSEIGKSGLGGGFDHEIPSNPILWASPQN--SHLLALLRAT-QN 177

Query: 486 XXXXXXXXXXXXXXKDEGHMIGSHVSLESAAVTGALNARTIGLDSLGQVPTGLYNSIFRN 665
                         KD+G MIGSH++ ES   T AL   TI +       T   NS    
Sbjct: 178 PNPNPSPISNSVTVKDDGVMIGSHMTSESGVGT-ALTGETINIKLNSTNKTATINSKMAL 236

Query: 666 NIXXXXXXXXXXXXXXXXXXXXSHGDAQNTGIQELYQSLRSSVNYYPDQSSATTTNLTSM 845
            +                         QNTGIQELYQ LRSS NYY D S    +N  S 
Sbjct: 237 YLVKF----------------------QNTGIQELYQRLRSSTNYYTDHSPVVLSNAVS- 273

Query: 846 PTSSSSIMEPTVIAGGEFNCWNPQFSWSSVQAATNGTFP 962
             SSSSI+E   IAGGE   WNP FSWS +   TNG +P
Sbjct: 274 --SSSSILESAPIAGGELGYWNPTFSWSDL-PTTNGAYP 309