BLASTX nr result

ID: Coptis25_contig00007238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007238
         (1326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77892.1| hypothetical protein VITISV_016272 [Vitis vinifera]   134   7e-29
gb|EAY95021.1| hypothetical protein OsI_16830 [Oryza sativa Indi...   110   1e-21
emb|CAD41269.1| OSJNBb0103I08.8 [Oryza sativa Japonica Group] gi...   108   2e-21
emb|CBI30330.3| unnamed protein product [Vitis vinifera]              100   6e-19
emb|CAN76322.1| hypothetical protein VITISV_010458 [Vitis vinifera]   100   6e-19

>emb|CAN77892.1| hypothetical protein VITISV_016272 [Vitis vinifera]
          Length = 206

 Score =  134 bits (336), Expect = 7e-29
 Identities = 97/224 (43%), Positives = 112/224 (50%), Gaps = 11/224 (4%)
 Frame = +3

Query: 96  SPTVRFLGFLTQPPDTDSNPFELDESDVIWS------SSPHXXXXXXXXXXXXLFXXXXX 257
           SPT RFL  L QP ++DSNP ELDESDV+WS      +SP             L      
Sbjct: 7   SPTNRFLRQLKQP-NSDSNPLELDESDVVWSPDSAGPNSPSPSPSTDSSPPSSLXL---- 61

Query: 258 XXXXXXXXXXXXXXHHSFRSEKFFGLSAALSDDQRPLVQRKPSLNHSLSG---ARMIPPV 428
                            F+  +  GLS+ LSDD+  L++R+  L+ S S    AR IPPV
Sbjct: 62  ----------------KFQPARL-GLSSVLSDDRPTLLRRQSGLDPSFSATSAARTIPPV 104

Query: 429 SYPRXXXXXXXXXXXX--KFHQSAPVNVPVWPAANKFNASETXXXXXXXXXXXXXXXXML 602
             PR              KF  SAPVNVP WP+                         ML
Sbjct: 105 PIPRSGSSSGDSTGSGSGKFLMSAPVNVPAWPSNGV--RRRRSDLDDSDDLEDDTKAEML 162

Query: 603 PPHEIVARSQSTTFSVFEGVGRTLKGRDLRRVRNAVWQKTGFLD 734
           PPHEIVARS   TFSV EGVGRTLKGRDLRRVRNAV+QKTGF+D
Sbjct: 163 PPHEIVARSHVMTFSVVEGVGRTLKGRDLRRVRNAVFQKTGFID 206


>gb|EAY95021.1| hypothetical protein OsI_16830 [Oryza sativa Indica Group]
          Length = 209

 Score =  110 bits (274), Expect = 1e-21
 Identities = 79/216 (36%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
 Frame = +3

Query: 96  SPTVRFLGFLTQPPD-TDSNPFELDESDVIWSSSPHXXXXXXXXXXXX-LFXXXXXXXXX 269
           SP++RFLG L QP D +  +  ELDE DV+WSSS                          
Sbjct: 13  SPSLRFLGLLKQPDDGSGDHELELDERDVVWSSSSSSNTSPSSWASSTNSSPSLTPSASA 72

Query: 270 XXXXXXXXXXHHSFRSEKFFGLSAALSDDQRPLVQRKPSLNHSLSGARMIPPVSYPRXXX 449
                      H+F +    GLSA L+DD  P      S+       R  PP  Y     
Sbjct: 73  GVGVRRPLSSSHAFPAAGSVGLSALLADDHAPTA----SIPAKARPERQQPPQPY----- 123

Query: 450 XXXXXXXXXKFHQSAPVNVPVWPAANKFNASETXXXXXXXXXXXXXXXXML-PPHEIVAR 626
                      HQSAPV VP WP A   +                    ++ PPHEI AR
Sbjct: 124 -----------HQSAPVAVPAWPKATDSDRRRRGVQHEALNDEEDDDDELVVPPHEIAAR 172

Query: 627 SQSTTFSVFEGVGRTLKGRDLRRVRNAVWQKTGFLD 734
             +   SV EG GRTLKGRDLRRVRNAVW+ TGFLD
Sbjct: 173 RAAAAASVMEGAGRTLKGRDLRRVRNAVWRTTGFLD 208


>emb|CAD41269.1| OSJNBb0103I08.8 [Oryza sativa Japonica Group]
           gi|116310436|emb|CAH67442.1| H0501D11.6 [Oryza sativa
           Indica Group] gi|125549197|gb|EAY95019.1| hypothetical
           protein OsI_16828 [Oryza sativa Indica Group]
           gi|215741373|dbj|BAG97868.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 209

 Score =  108 bits (271), Expect = 2e-21
 Identities = 78/216 (36%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
 Frame = +3

Query: 96  SPTVRFLGFLTQPPD-TDSNPFELDESDVIWSSSPHXXXXXXXXXXXX-LFXXXXXXXXX 269
           SP++RFLG L QP D +  +  ELDE DV+WSSS                          
Sbjct: 13  SPSLRFLGLLKQPDDGSGDHELELDERDVVWSSSSSSNTSPSSWASSTNSSPSLTPSASA 72

Query: 270 XXXXXXXXXXHHSFRSEKFFGLSAALSDDQRPLVQRKPSLNHSLSGARMIPPVSYPRXXX 449
                      H+F +    GLSA L+DD  P      S+       R  PP  Y     
Sbjct: 73  GVGVRRPLSSSHAFPAAGSVGLSALLADDHAPTA----SIPAKARPERQQPPQPY----- 123

Query: 450 XXXXXXXXXKFHQSAPVNVPVWPAANKFNASETXXXXXXXXXXXXXXXXML-PPHEIVAR 626
                      HQSAPV VP WP A   +                    ++ PPHE+ AR
Sbjct: 124 -----------HQSAPVAVPAWPKATDSDRRRRGVQHEALNDEEDDDDELVVPPHEMAAR 172

Query: 627 SQSTTFSVFEGVGRTLKGRDLRRVRNAVWQKTGFLD 734
             +   SV EG GRTLKGRDLRRVRNAVW+ TGFLD
Sbjct: 173 RAAAAASVMEGAGRTLKGRDLRRVRNAVWRTTGFLD 208


>emb|CBI30330.3| unnamed protein product [Vitis vinifera]
          Length = 218

 Score =  100 bits (250), Expect = 6e-19
 Identities = 63/153 (41%), Positives = 80/153 (52%), Gaps = 11/153 (7%)
 Frame = +3

Query: 309 FRSEKFFGLSAALSDDQR-------PLVQRKPSLNHSLSGARMIPPVSYPRXXXXXXXXX 467
           FR+ +  G+ A L+D  +       P++ RK S   S+     IP   +           
Sbjct: 72  FRTPESHGILATLTDSDQNMTIEAPPMLNRKTSFPSSIRAVPAIPKPPHISLENKHSQSL 131

Query: 468 XXXKFHQSAPVNVPVWPAANKFNASETXXXXXXXXXXXXXXXXMLPPHEIVAR----SQS 635
              +FHQSAP+N+PV   A   + ++                 MLPPHEIVAR    S  
Sbjct: 132 PIRRFHQSAPMNIPVLSKARSSSLAQADDEDDEAEDE------MLPPHEIVARGSRRSPK 185

Query: 636 TTFSVFEGVGRTLKGRDLRRVRNAVWQKTGFLD 734
           TT SV EGVGRTLKGRDLR+VRNAVW+KTGFLD
Sbjct: 186 TTSSVLEGVGRTLKGRDLRQVRNAVWRKTGFLD 218


>emb|CAN76322.1| hypothetical protein VITISV_010458 [Vitis vinifera]
          Length = 211

 Score =  100 bits (250), Expect = 6e-19
 Identities = 66/144 (45%), Positives = 80/144 (55%), Gaps = 9/144 (6%)
 Frame = +3

Query: 330 GLSAALSDDQR-PLVQRKPSLNHSLSGARMIPPVSYPRXXXXXXXXXXXXKFHQSAPVNV 506
           G+ AAL + +R P    +P  N   S +RMIP +  P             K+HQSAPVNV
Sbjct: 80  GILAALPESERSPGAYGRPMFNQKASSSRMIPAIPKPTVERHVPVSA---KYHQSAPVNV 136

Query: 507 PVWPA----ANKFNASETXXXXXXXXXXXXXXXXMLPPHEIVAR----SQSTTFSVFEGV 662
           PV       A++FNA +                 MLPPHEIVAR    S   + SV EGV
Sbjct: 137 PVLSKSVRRAHEFNADDIDDGAEGE---------MLPPHEIVARGSEHSPGLSCSVLEGV 187

Query: 663 GRTLKGRDLRRVRNAVWQKTGFLD 734
           GRTLKGRDLR+VRNAVW++TGFLD
Sbjct: 188 GRTLKGRDLRQVRNAVWRQTGFLD 211


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