BLASTX nr result

ID: Coptis25_contig00007230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007230
         (1108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280840.1| PREDICTED: aminoacyl tRNA synthase complex-i...   285   1e-74
ref|XP_004156017.1| PREDICTED: aminoacyl tRNA synthase complex-i...   276   7e-72
ref|XP_004144343.1| PREDICTED: aminoacyl tRNA synthase complex-i...   275   1e-71
ref|XP_002463509.1| hypothetical protein SORBIDRAFT_01g001060 [S...   271   3e-70
ref|NP_001236579.1| uncharacterized protein LOC100499829 [Glycin...   269   8e-70

>ref|XP_002280840.1| PREDICTED: aminoacyl tRNA synthase complex-interacting
           multifunctional protein 1-like [Vitis vinifera]
          Length = 260

 Score =  285 bits (730), Expect = 1e-74
 Identities = 143/206 (69%), Positives = 161/206 (78%), Gaps = 4/206 (1%)
 Frame = +3

Query: 384 APVTEDVTSAPPVPNPDSAVGSPSPA----SNDPLKDAAGTLDIRVGQIIKVWIHPEADT 551
           A  T   T APP P P +   SP P       DP+KDAA  LDIRVG ++K W H EAD+
Sbjct: 55  AVTTSSSTPAPPPPPPPADASSPPPPLSSDDGDPIKDAASMLDIRVGLVLKAWRHEEADS 114

Query: 552 LYVEEVDVGEPEPRTICSGLVKYIPLETLQNSKVIVLANLKPRNMRGVKSSGMLLCASDA 731
           LYVEEVDVGEPEPR ICSGLVKY+PL+ LQ+ KV+VLANLKPRNMRGVKS GML+ ASDA
Sbjct: 115 LYVEEVDVGEPEPRIICSGLVKYVPLDHLQDKKVVVLANLKPRNMRGVKSCGMLMAASDA 174

Query: 732 SHENVELLSPPEGSVIGERIWFGLEEEKENQSPAASPNQIQKKKIWELVQPHLKTDGSCV 911
           SHENVELL PPEGS+ GERIWFG E+EK++Q  AASPNQ+QKKKIWELVQPHLKTD S +
Sbjct: 175 SHENVELLVPPEGSIPGERIWFGSEDEKQSQPAAASPNQVQKKKIWELVQPHLKTDASGI 234

Query: 912 AALGAQRMQTSAGVVTSTSLQNANIS 989
             LG   M+TSAGVV S SL+NANIS
Sbjct: 235 VVLGVHLMRTSAGVVVSRSLKNANIS 260


>ref|XP_004156017.1| PREDICTED: aminoacyl tRNA synthase complex-interacting
           multifunctional protein 1-like [Cucumis sativus]
          Length = 278

 Score =  276 bits (706), Expect = 7e-72
 Identities = 143/210 (68%), Positives = 163/210 (77%)
 Frame = +3

Query: 360 FCASSEVEAPVTEDVTSAPPVPNPDSAVGSPSPASNDPLKDAAGTLDIRVGQIIKVWIHP 539
           FC ++  E PVT D + A    + D     P       +KDAA  LDIRVG+IIK W H 
Sbjct: 74  FCTTASTE-PVTSDASIASSSTSLDKDEDDPEKN----IKDAADMLDIRVGRIIKAWRHL 128

Query: 540 EADTLYVEEVDVGEPEPRTICSGLVKYIPLETLQNSKVIVLANLKPRNMRGVKSSGMLLC 719
           EADTLYVEEVDVGEPEPR ICSGLVKYIPL+ L + +VIVLANLKPRNMRG+KS GML+ 
Sbjct: 129 EADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGIKSCGMLMA 188

Query: 720 ASDASHENVELLSPPEGSVIGERIWFGLEEEKENQSPAASPNQIQKKKIWELVQPHLKTD 899
           ASD+ HENVELL PPEGS+ GERIWFG E+EK NQ  AA+PNQIQKKKIWE+VQPHLKTD
Sbjct: 189 ASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEMVQPHLKTD 248

Query: 900 GSCVAALGAQRMQTSAGVVTSTSLQNANIS 989
           G C A LG+  M+TSAGVVTSTSL++ANIS
Sbjct: 249 GCCTAVLGSHPMRTSAGVVTSTSLKHANIS 278


>ref|XP_004144343.1| PREDICTED: aminoacyl tRNA synthase complex-interacting
           multifunctional protein 1-like [Cucumis sativus]
          Length = 278

 Score =  275 bits (704), Expect = 1e-71
 Identities = 144/210 (68%), Positives = 164/210 (78%)
 Frame = +3

Query: 360 FCASSEVEAPVTEDVTSAPPVPNPDSAVGSPSPASNDPLKDAAGTLDIRVGQIIKVWIHP 539
           FC ++  E PVT D + A    + D       P  N  +KDAA  LDIRVG+IIK W H 
Sbjct: 74  FCTTASTE-PVTSDASIALSSTSLDK--DDDDPEKN--IKDAADMLDIRVGRIIKAWRHL 128

Query: 540 EADTLYVEEVDVGEPEPRTICSGLVKYIPLETLQNSKVIVLANLKPRNMRGVKSSGMLLC 719
           EADTLYVEEVDVGEPEPR ICSGLVKYIPL+ L + +VIVLANLKPRNMRG+KS GML+ 
Sbjct: 129 EADTLYVEEVDVGEPEPRLICSGLVKYIPLDQLLDRRVIVLANLKPRNMRGIKSCGMLMA 188

Query: 720 ASDASHENVELLSPPEGSVIGERIWFGLEEEKENQSPAASPNQIQKKKIWELVQPHLKTD 899
           ASD+ HENVELL PPEGS+ GERIWFG E+EK NQ  AA+PNQIQKKKIWE+VQPHLKTD
Sbjct: 189 ASDSLHENVELLLPPEGSIPGERIWFGSEDEKGNQPDAAAPNQIQKKKIWEMVQPHLKTD 248

Query: 900 GSCVAALGAQRMQTSAGVVTSTSLQNANIS 989
           G C A LG+  M+TSAGVVTSTSL++ANIS
Sbjct: 249 GCCTAVLGSHPMRTSAGVVTSTSLKHANIS 278


>ref|XP_002463509.1| hypothetical protein SORBIDRAFT_01g001060 [Sorghum bicolor]
           gi|241917363|gb|EER90507.1| hypothetical protein
           SORBIDRAFT_01g001060 [Sorghum bicolor]
          Length = 254

 Score =  271 bits (692), Expect = 3e-70
 Identities = 137/231 (59%), Positives = 168/231 (72%), Gaps = 3/231 (1%)
 Frame = +3

Query: 306 GKISRTISLPLPSF--NTRLFCASSEVEAPVTEDVTSA-PPVPNPDSAVGSPSPASNDPL 476
           G +S   + P P    N  LFC+SS    P+T+ V    PPVP+ D         +   +
Sbjct: 31  GAVSFLAARPSPRSGRNLALFCSSSPTSLPLTDAVEETKPPVPSGDDK-------AEPTV 83

Query: 477 KDAAGTLDIRVGQIIKVWIHPEADTLYVEEVDVGEPEPRTICSGLVKYIPLETLQNSKVI 656
           +D  G LD+RVG+++K W HPEADTLYVEEVDVGE EPRTICSGLV +IP++ LQ+S VI
Sbjct: 84  EDLVGLLDVRVGRVLKAWRHPEADTLYVEEVDVGEAEPRTICSGLVNFIPIQDLQDSNVI 143

Query: 657 VLANLKPRNMRGVKSSGMLLCASDASHENVELLSPPEGSVIGERIWFGLEEEKENQSPAA 836
           VLANLKPRNMRG+KS+GML+ ASDASHENVELL PPEGS+ GER+WFG EEEK  QS  A
Sbjct: 144 VLANLKPRNMRGIKSNGMLMAASDASHENVELLIPPEGSLPGERVWFGSEEEKHRQSDPA 203

Query: 837 SPNQIQKKKIWELVQPHLKTDGSCVAALGAQRMQTSAGVVTSTSLQNANIS 989
           SPNQ+QKKKIWE VQPHL+T  +C+  LG ++M+TSAG +   SLQ A +S
Sbjct: 204 SPNQVQKKKIWEAVQPHLRTTDNCIVVLGDKQMRTSAGPIFCKSLQGARVS 254


>ref|NP_001236579.1| uncharacterized protein LOC100499829 [Glycine max]
           gi|255626975|gb|ACU13832.1| unknown [Glycine max]
          Length = 256

 Score =  269 bits (688), Expect = 8e-70
 Identities = 138/217 (63%), Positives = 161/217 (74%)
 Frame = +3

Query: 339 PSFNTRLFCASSEVEAPVTEDVTSAPPVPNPDSAVGSPSPASNDPLKDAAGTLDIRVGQI 518
           P F T    ++S  EA  TE +TS            + S  +++ +KDAAG LD+RVG+I
Sbjct: 51  PPFRTLSSSSASTDEAMTTETITS-----------NNASGEADNSIKDAAGLLDMRVGRI 99

Query: 519 IKVWIHPEADTLYVEEVDVGEPEPRTICSGLVKYIPLETLQNSKVIVLANLKPRNMRGVK 698
           ++ W H E D+LYVEEVD+GEPEPR ICSGLVKYIPLE LQ  KVIVL+NLKPRNMRGVK
Sbjct: 100 LRAWKHDEVDSLYVEEVDIGEPEPRIICSGLVKYIPLENLQGKKVIVLSNLKPRNMRGVK 159

Query: 699 SSGMLLCASDASHENVELLSPPEGSVIGERIWFGLEEEKENQSPAASPNQIQKKKIWELV 878
           S GML+ ASDA HENVELL PPE +  GERIWFG E+EK+NQ  AA+PNQ+QKKKIWELV
Sbjct: 160 SCGMLMAASDAKHENVELLFPPEEATPGERIWFGTEDEKDNQPDAATPNQLQKKKIWELV 219

Query: 879 QPHLKTDGSCVAALGAQRMQTSAGVVTSTSLQNANIS 989
           QPHLKTD SC+A LG   M+TS G V   SLQNANIS
Sbjct: 220 QPHLKTDTSCIAMLGEHVMRTSVGSVACQSLQNANIS 256


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