BLASTX nr result
ID: Coptis25_contig00007222
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007222 (1937 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containin... 655 0.0 ref|XP_002512627.1| nucleic acid binding protein, putative [Rici... 642 0.0 ref|XP_002325901.1| predicted protein [Populus trichocarpa] gi|2... 610 e-172 ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|2... 608 e-171 ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containin... 606 e-171 >ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like isoform 1 [Vitis vinifera] Length = 441 Score = 655 bits (1691), Expect = 0.0 Identities = 317/443 (71%), Positives = 355/443 (80%), Gaps = 17/443 (3%) Frame = +1 Query: 367 MEYDGGIPPI--SVTEGSSLSSPLDEDAMWEMNMRGNESMESRQYPERPGEQDCTYYIRT 540 ME+D GIP VTEGSSLS L++DAMW+MN+R +E+MES YPERPGE DC+YYIRT Sbjct: 1 MEFDAGIPMPRGQVTEGSSLSPSLNQDAMWQMNLRSSETMESGPYPERPGEPDCSYYIRT 60 Query: 541 GLCRFGMTCRFNHPPNRKLAVAAARIKGVYPERIGQPECQYYLKTGTCKFGATCKFHHPR 720 GLCRFG+TCRFNHPPNRKLA+A AR+KG +PER+GQPECQYYLKTGTCKFGATCKFHHPR Sbjct: 61 GLCRFGITCRFNHPPNRKLAIATARMKGEFPERMGQPECQYYLKTGTCKFGATCKFHHPR 120 Query: 721 DKAGIAGRVVLNILGYPLRPNEKECAYYLRTGQCKFGNTCKFHHPQPSNAMVSLRGSPVY 900 DKAGIAGRV LNILGYPLRP+E +CAYYLRTGQCKFG+TCKFHHPQPS+ MVSLRGSPVY Sbjct: 121 DKAGIAGRVSLNILGYPLRPDEIDCAYYLRTGQCKFGSTCKFHHPQPSSMMVSLRGSPVY 180 Query: 901 PPVHSPSTPGQQSYQ-GVTNWALSRTSFIPSPRWQGPSSYTQVILPQGVVPVPSWNAYTG 1077 P V SP+TPGQQSY G+TNW LSR SFIPSPRWQ PSSY ++LPQGVV VP WNAY+G Sbjct: 181 PSVPSPTTPGQQSYAGGITNWPLSRASFIPSPRWQAPSSYAPLMLPQGVVSVPGWNAYSG 240 Query: 1078 QIGSISSSERQQQTPGNNQYYGTPRQSQTSHEVQ--------------GLYNLQRDNVFP 1215 Q+G S SE QQQT GNNQ YGT RQS+ + G Y LQR+NVFP Sbjct: 241 QLG--SPSESQQQTGGNNQIYGTSRQSEQPNTGSQGTFSPYRSGSVPIGFYALQRENVFP 298 Query: 1216 ERPGQPECQFYMKTGDCKYGTVCRFHHPRERLIPVPNCXXXXXXXXXXXXXXXCIFYSRY 1395 ERPGQPECQFYMKTGDCK+G VCRFHHPRERLIP P+C CIFYSRY Sbjct: 299 ERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYSRY 358 Query: 1396 GICKFGPNCKFDHPMGPYAYNLSSSASADIPVVRRLLGSSSGISAVPLSLEGPVEAVSGK 1575 GICKFGP+CKFDHPMG +AYNLS+S+SAD PVVRRLLGSSSG +A+ LS +G VEA S K Sbjct: 359 GICKFGPSCKFDHPMGIFAYNLSASSSADAPVVRRLLGSSSGSAALTLSSDGLVEAGSTK 418 Query: 1576 SR*LSLAVTQQMPSGAENIDGDG 1644 R LSL T+QMP G +NID +G Sbjct: 419 PRRLSLPETRQMPPGDDNIDTEG 441 >ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis] gi|223548588|gb|EEF50079.1| nucleic acid binding protein, putative [Ricinus communis] Length = 448 Score = 642 bits (1657), Expect = 0.0 Identities = 314/452 (69%), Positives = 354/452 (78%), Gaps = 26/452 (5%) Frame = +1 Query: 367 MEYDGGIP-----------PISVTEGSSLSSPLDEDAMWEMNMRGNESMESRQYPERPGE 513 M++D GIP P+ VTE SLS+ L+EDAMW+MN+R +E+M+S YPE PGE Sbjct: 1 MDFDAGIPMSRTAPPPPPPPLPVTEDPSLSASLNEDAMWQMNLRSSETMDSGPYPEHPGE 60 Query: 514 QDCTYYIRTGLCRFGMTCRFNHPPNRKLAVAAARIKGVYPERIGQPECQYYLKTGTCKFG 693 DC+YYIRTGLCRFG TCRFNHPPNRKLA+AAAR+KG +PERIGQPECQYYLKTGTCKFG Sbjct: 61 PDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFG 120 Query: 694 ATCKFHHPRDKAGIAGRVVLNILGYPLRPNEKECAYYLRTGQCKFGNTCKFHHPQPSNAM 873 ATCKFHHP+DKAGIAGRV LNILGYPLRPNE ECAYYLRTGQCKFG+TCKFHHPQP+N M Sbjct: 121 ATCKFHHPKDKAGIAGRVSLNILGYPLRPNEIECAYYLRTGQCKFGSTCKFHHPQPTNVM 180 Query: 874 VSLRGSPVYPPVHSPSTPGQQSYQ-GVTNWALSRTSFIPSPRWQGPSSYTQVILPQGVVP 1050 V LRGSPVYP V SP+TPGQQSY GVTNW SR SFI SPRWQ PSSYT +ILPQGVV Sbjct: 181 VPLRGSPVYPTVQSPTTPGQQSYTGGVTNW--SRASFITSPRWQAPSSYTPLILPQGVVS 238 Query: 1051 VPSWNAYTGQIGSISSSERQQQTPGNNQYYGTPRQSQTSHEVQ--------------GLY 1188 VP WNAY+GQ+GS+SS E QQQT GN+Q YGT RQS++ + G Y Sbjct: 239 VPGWNAYSGQLGSVSSPEGQQQT-GNSQIYGTSRQSESVNTGSQGTLSPLRAGSMPVGFY 297 Query: 1189 NLQRDNVFPERPGQPECQFYMKTGDCKYGTVCRFHHPRERLIPVPNCXXXXXXXXXXXXX 1368 LQRDNVFPERPGQPECQFYMKTGDCK+G VCRFHHPRERLIP P+C Sbjct: 298 ALQRDNVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGE 357 Query: 1369 XXCIFYSRYGICKFGPNCKFDHPMGPYAYNLSSSASADIPVVRRLLGSSSGISAVPLSLE 1548 CIFYSRYG+CKFGP+CKFDHPMG + YNLS+ +SAD P VRRLLGSSSG +A+ LS E Sbjct: 358 PLCIFYSRYGVCKFGPSCKFDHPMGIFTYNLSAPSSADAP-VRRLLGSSSGSAALTLSTE 416 Query: 1549 GPVEAVSGKSR*LSLAVTQQMPSGAENIDGDG 1644 G V+A S K R LSL+ +QMPSG +NID +G Sbjct: 417 GLVDAGSTKPRRLSLSEPRQMPSGDDNIDTEG 448 >ref|XP_002325901.1| predicted protein [Populus trichocarpa] gi|222862776|gb|EEF00283.1| predicted protein [Populus trichocarpa] Length = 414 Score = 610 bits (1573), Expect = e-172 Identities = 294/418 (70%), Positives = 333/418 (79%), Gaps = 16/418 (3%) Frame = +1 Query: 439 DAMWEMNMRGNESMESRQYPERPGEQDCTYYIRTGLCRFGMTCRFNHPPNRKLAVAAARI 618 DAMW+MN+R +E+ME+ YPERPGE DC+YYIRTGLCRFG TCRFNHPPNRKLA+AAAR+ Sbjct: 1 DAMWQMNLRSSETMEAGPYPERPGEPDCSYYIRTGLCRFGPTCRFNHPPNRKLAIAAARM 60 Query: 619 KGVYPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVVLNILGYPLRPNEKECA 798 KG +PERIGQPECQYYLKTGTCKFGATCKFHHPRDKAG++GRV LNILGYPLR NE ECA Sbjct: 61 KGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGVSGRVSLNILGYPLRLNEMECA 120 Query: 799 YYLRTGQCKFGNTCKFHHPQPSNAMVSLRGSPVYPPVHSPSTPGQQSYQG--VTNWALSR 972 YYLRTGQCKFG+TCKFHHPQP+N MV LRGSPVYP V+SP+TPGQQSY G TNW SR Sbjct: 121 YYLRTGQCKFGSTCKFHHPQPTNVMVPLRGSPVYPTVNSPTTPGQQSYPGGLATNW--SR 178 Query: 973 TSFIPSPRWQGPSSYTQVILPQGVVPVPSWNAYTGQIGSISSSERQQQTPGNNQYYGTPR 1152 SFI SPRWQ PS+YT +ILPQGVV VP WNAY+GQ+GS+SS E QQQT GN+Q YGT R Sbjct: 179 ASFITSPRWQAPSNYTPLILPQGVVSVPGWNAYSGQVGSVSSPESQQQT-GNSQIYGTSR 237 Query: 1153 QSQTSHE--------------VQGLYNLQRDNVFPERPGQPECQFYMKTGDCKYGTVCRF 1290 Q+++ + G Y LQR++VFPERPGQPECQFYMKTGDCK+G VCRF Sbjct: 238 QNESVNAGSQGTFSPYRSDSVPMGFYALQRESVFPERPGQPECQFYMKTGDCKFGAVCRF 297 Query: 1291 HHPRERLIPVPNCXXXXXXXXXXXXXXXCIFYSRYGICKFGPNCKFDHPMGPYAYNLSSS 1470 HHPRERLIP P+C CIFYSRYGICKFGP+CKF HPMG + YNL++S Sbjct: 298 HHPRERLIPAPDCVLSAIGLPLRPGEPLCIFYSRYGICKFGPSCKFHHPMGIFTYNLTAS 357 Query: 1471 ASADIPVVRRLLGSSSGISAVPLSLEGPVEAVSGKSR*LSLAVTQQMPSGAENIDGDG 1644 +SAD P VRRLLGSSSG +A+ LS EG VEA S K R LSL+ +QMP G +NID G Sbjct: 358 SSADAP-VRRLLGSSSGSAALTLSSEGLVEAGSTKPRRLSLSEPRQMPPGDDNIDTGG 414 >ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|222839206|gb|EEE77557.1| predicted protein [Populus trichocarpa] Length = 425 Score = 608 bits (1567), Expect = e-171 Identities = 294/424 (69%), Positives = 331/424 (78%), Gaps = 15/424 (3%) Frame = +1 Query: 418 LSSPLD-EDAMWEMNMRGNESMESRQYPERPGEQDCTYYIRTGLCRFGMTCRFNHPPNRK 594 LS P+ DAMW+MN+R +E+ME+ YPERPGE DC+YYIRTGLCRFG TCRFNHPPNRK Sbjct: 4 LSYPVSFSDAMWQMNLRSSETMEAGPYPERPGEPDCSYYIRTGLCRFGATCRFNHPPNRK 63 Query: 595 LAVAAARIKGVYPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVVLNILGYPL 774 LA+AAAR+KG +PERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGI+GRV LNILGYPL Sbjct: 64 LAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGISGRVSLNILGYPL 123 Query: 775 RPNEKECAYYLRTGQCKFGNTCKFHHPQPSNAMVSLRGSPVYPPVHSPSTPGQQSYQGVT 954 +PNE ECAYYLRTGQCKFG+TCKFHHPQP+N MV LRGSP+YP V SP+TPGQQSY G Sbjct: 124 QPNEIECAYYLRTGQCKFGSTCKFHHPQPTNMMVPLRGSPIYPTVSSPTTPGQQSYPGGL 183 Query: 955 NWALSRTSFIPSPRWQGPSSYTQVILPQGVVPVPSWNAYTGQIGSISSSERQQQTPGNNQ 1134 SR SFI SPRWQ PSSYT +ILPQGVV VP WNAY+GQ+GS+SS E QQQT GN+Q Sbjct: 184 ATTWSRASFITSPRWQAPSSYTPLILPQGVVSVPGWNAYSGQLGSVSSPESQQQT-GNSQ 242 Query: 1135 YYGTPRQSQTSHEVQ--------------GLYNLQRDNVFPERPGQPECQFYMKTGDCKY 1272 YGT R S++ + G Y LQR++VFPERPGQPECQFYMKTGDCK+ Sbjct: 243 IYGTSRHSESVNAGSQGTFSPYRSGSAPLGFYALQRESVFPERPGQPECQFYMKTGDCKF 302 Query: 1273 GTVCRFHHPRERLIPVPNCXXXXXXXXXXXXXXXCIFYSRYGICKFGPNCKFDHPMGPYA 1452 G VCRFHHPRERLIP P+C CIFYSRYGICKFGP+CKFDHPMG + Sbjct: 303 GAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGVFT 362 Query: 1453 YNLSSSASADIPVVRRLLGSSSGISAVPLSLEGPVEAVSGKSR*LSLAVTQQMPSGAENI 1632 YNL++S+SAD P VRRLLGSSSG + LS EG VEA K R LSL+ +QMP G +NI Sbjct: 363 YNLTASSSADAP-VRRLLGSSSGSPGLTLSSEGLVEAGPTKPRRLSLSEPRQMPPGDDNI 421 Query: 1633 DGDG 1644 D G Sbjct: 422 DTGG 425 >ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like isoform 1 [Glycine max] Length = 428 Score = 606 bits (1562), Expect = e-171 Identities = 290/441 (65%), Positives = 339/441 (76%), Gaps = 15/441 (3%) Frame = +1 Query: 367 MEYDGGIPPISVTEGSSLSSPLDEDAMWEMNMRGNESMESRQYPERPGEQDCTYYIRTGL 546 ME+D IP + S + DAMW++N+R +E+MES YPE PGE DC+YYIRTGL Sbjct: 1 MEFDAAIPVWTC------SYDVVSDAMWQINLRSSETMESGPYPEHPGEPDCSYYIRTGL 54 Query: 547 CRFGMTCRFNHPPNRKLAVAAARIKGVYPERIGQPECQYYLKTGTCKFGATCKFHHPRDK 726 CRFG TCRFNHPPNRKLA+AAAR+KG +PERIGQPECQYYLKTGTCKFGATC+FHHPRDK Sbjct: 55 CRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDK 114 Query: 727 AGIAGRVVLNILGYPLRPNEKECAYYLRTGQCKFGNTCKFHHPQPSNAMVSLRGSPVYPP 906 AGIAGRV +NILGYPLRPNE ECAYYLRTGQCKFGNTCKFHHPQP+N ++S+R SPVYP Sbjct: 115 AGIAGRVAMNILGYPLRPNEPECAYYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPT 174 Query: 907 VHSPSTPGQQSY-QGVTNWALSRTSFIPSPRWQGPSSYTQVILPQGVVPVPSWNAYTGQI 1083 VHSP+TPGQQSY G+TNW S +S+IPSPRWQGPSSY +ILPQG+V VP W+AY+GQ+ Sbjct: 175 VHSPTTPGQQSYATGITNW--SSSSYIPSPRWQGPSSYAPLILPQGMVSVPGWSAYSGQM 232 Query: 1084 GSISSSERQQQTPGNNQYYGTPRQSQTSHEVQ--------------GLYNLQRDNVFPER 1221 G S+ QQT GN Q YGT RQS+ ++ G Y LQR+N+FPER Sbjct: 233 G----SDSPQQTMGNGQSYGTSRQSEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPER 288 Query: 1222 PGQPECQFYMKTGDCKYGTVCRFHHPRERLIPVPNCXXXXXXXXXXXXXXXCIFYSRYGI 1401 P QPECQFYMKTGDCK+G VCRFHHPRER+IP P+C C+FYSRYGI Sbjct: 289 PDQPECQFYMKTGDCKFGAVCRFHHPRERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGI 348 Query: 1402 CKFGPNCKFDHPMGPYAYNLSSSASADIPVVRRLLGSSSGISAVPLSLEGPVEAVSGKSR 1581 CKFGP+CKFDHPMG + YN+S+S SAD P RR+LGSSSG SA+ LS EG VE+ S R Sbjct: 349 CKFGPSCKFDHPMGVFTYNISASPSADAP-GRRMLGSSSGTSALNLSSEGLVESGSANPR 407 Query: 1582 *LSLAVTQQMPSGAENIDGDG 1644 LSL+ T+Q+PSG +NID +G Sbjct: 408 RLSLSETRQIPSGDDNIDEEG 428