BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007220
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606579.1| Cytosolic Fe-S cluster assembly factor NARFL...    59   8e-18
emb|CAJ55835.1| hypothetical protein [Medicago truncatula]             59   1e-17
ref|XP_788197.3| PREDICTED: cytosolic Fe-S cluster assembly fact...    53   2e-15
ref|XP_002323132.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-08
ref|XP_003635380.1| PREDICTED: cytosolic Fe-S cluster assembly f...    64   2e-08

>ref|XP_003606579.1| Cytosolic Fe-S cluster assembly factor NARFL [Medicago truncatula]
           gi|355507634|gb|AES88776.1| Cytosolic Fe-S cluster
           assembly factor NARFL [Medicago truncatula]
          Length = 570

 Score = 58.9 bits (141), Expect(2) = 8e-18
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +3

Query: 510 PDKIYHVTVMPCYDKKLEASRDDFVFTVDS 599
           P+++YHVTVMPCYDKKLEASRDDFVF ++S
Sbjct: 313 PEEVYHVTVMPCYDKKLEASRDDFVFQLES 342



 Score = 57.0 bits (136), Expect(2) = 8e-18
 Identities = 61/186 (32%), Positives = 85/186 (45%), Gaps = 46/186 (24%)
 Frame = +2

Query: 110 EMSTRRKLSPSVRIGDLNDFIVSLKKDMTNSKQ*--KYP*KTA*HAVDVLRQQKQL---- 271
           EMS   K SP++RIGD+NDFIV  +    + K+   K P K      D   + K +    
Sbjct: 92  EMS--EKFSPALRIGDVNDFIVPSQACTVSLKERRLKKPDKVEVKVADRQVKSKPVKISL 149

Query: 272 --------C-------------LDEFLNSIIDSAGKNVIVSVSPHSRTSLAAHFRL---- 376
                   C             LDEFL++I  + GK VIVSVSP SR S+AAHFR+    
Sbjct: 150 KDCLACSGCVTSAETVLLNNQGLDEFLSNI--NEGKTVIVSVSPQSRASIAAHFRISPLQ 207

Query: 377 --*ETYHFF*VIGCQ-------------VETYLLFSLVTNQHVFDNGESSKTSLPLLVLA 511
              +   FF  +G +             VE+ + F     ++ F + E SK+SLP++  A
Sbjct: 208 VFKKLTRFFKSLGVRAVFDTSCSRDLTLVESCVEFVSRYRKNQFVDDERSKSSLPMISSA 267

Query: 512 RQNLPC 529
              L C
Sbjct: 268 CPGLIC 273


>emb|CAJ55835.1| hypothetical protein [Medicago truncatula]
          Length = 478

 Score = 58.9 bits (141), Expect(2) = 1e-17
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +3

Query: 510 PDKIYHVTVMPCYDKKLEASRDDFVFTVDS 599
           P+++YHVTVMPCYDKKLEASRDDFVF ++S
Sbjct: 221 PEEVYHVTVMPCYDKKLEASRDDFVFQLES 250



 Score = 56.6 bits (135), Expect(2) = 1e-17
 Identities = 58/180 (32%), Positives = 82/180 (45%), Gaps = 46/180 (25%)
 Frame = +2

Query: 128 KLSPSVRIGDLNDFIVSLKKDMTNSKQ*--KYP*KTA*HAVDVLRQQKQL---------- 271
           K SP++RIGD+NDFIV  +    + K+   K P K      D   + K +          
Sbjct: 4   KFSPALRIGDVNDFIVPSQACTVSLKERRLKKPDKVEVKVADRQVKSKPVKISLKDCLAC 63

Query: 272 --C-------------LDEFLNSIIDSAGKNVIVSVSPHSRTSLAAHFRL------*ETY 388
             C             LDEFL++I  + GK VIVSVSP SR S+AAHFR+       +  
Sbjct: 64  SGCVTSAETVLLNNQGLDEFLSNI--NEGKTVIVSVSPQSRASIAAHFRISPLQVFKKLT 121

Query: 389 HFF*VIGCQ-------------VETYLLFSLVTNQHVFDNGESSKTSLPLLVLARQNLPC 529
            FF  +G +             VE+ + F     ++ F + E SK+SLP++  A   L C
Sbjct: 122 RFFKSLGVRAVFDTSCSRDLTLVESCVEFVSRYRKNQFVDDERSKSSLPMISSACPGLIC 181


>ref|XP_788197.3| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL
           [Strongylocentrotus purpuratus]
          Length = 478

 Score = 53.1 bits (126), Expect(3) = 2e-15
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = +3

Query: 510 PDKIYHVTVMPCYDKKLEASRDDF 581
           PD IYHVTVMPCYDKKLEASRDDF
Sbjct: 236 PDCIYHVTVMPCYDKKLEASRDDF 259



 Score = 42.7 bits (99), Expect(3) = 2e-15
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = +1

Query: 187 GYDKL*TVKISLKDCLACSGCVTSAETVM 273
           G  KL   KI+L DCLACSGC+TSAE+V+
Sbjct: 55  GSRKLEKAKITLNDCLACSGCITSAESVL 83



 Score = 32.0 bits (71), Expect(3) = 2e-15
 Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
 Frame = +2

Query: 320 VIVSVSPHSRTSLAAHFRL------*ETYHFF*VIGCQ---VETYLL-FSLVTNQHVF-- 463
           VIV++SP SR SLAA ++L           FF  +G      ET+   FSL+ +Q  F  
Sbjct: 114 VIVTISPQSRASLAAKYKLSLPDTAKRLTTFFRELGVHHVFDETFSRDFSLLESQREFIQ 173

Query: 464 -DNGESSKTSLPLLVLARQNLPC 529
             N +++K SLP+L  A     C
Sbjct: 174 RFNNQATKGSLPMLASACPGWVC 196


>ref|XP_002323132.1| predicted protein [Populus trichocarpa] gi|222867762|gb|EEF04893.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = +3

Query: 510 PDKIYHVTVMPCYDKKLEASRDDFVFTVDSGGGNANDLSVSE 635
           PD++YHVTVMPCYDKKLEA RDDFVF V+    N N L ++E
Sbjct: 218 PDEVYHVTVMPCYDKKLEAVRDDFVFEVEQEDANKNGLRIAE 259


>ref|XP_003635380.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like [Vitis
           vinifera] gi|297744923|emb|CBI38438.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +3

Query: 510 PDKIYHVTVMPCYDKKLEASRDDFVFTVDSGGG 608
           PD++YHV+VMPCYDKKLEA+RDDFVF VDS GG
Sbjct: 223 PDEVYHVSVMPCYDKKLEAARDDFVFEVDSPGG 255