BLASTX nr result
ID: Coptis25_contig00007202
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007202 (1363 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH... 374 e-101 ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycin... 370 e-100 ref|XP_002513323.1| membrane associated ring finger 1,8, putativ... 363 6e-98 ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|2... 356 9e-96 ref|XP_004144419.1| PREDICTED: E3 ubiquitin-protein ligase MARCH... 354 3e-95 >ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1 [Vitis vinifera] gi|297735744|emb|CBI18431.3| unnamed protein product [Vitis vinifera] Length = 258 Score = 374 bits (960), Expect = e-101 Identities = 194/259 (74%), Positives = 204/259 (78%), Gaps = 20/259 (7%) Frame = +1 Query: 229 MQLVSTGSSGTEDISETEPILPQS------DESPFSCEIRP------LVD--------DE 348 MQLVS TED SETEPIL QS +ES SCEIR +VD DE Sbjct: 1 MQLVSNDRQ-TEDGSETEPILCQSNIEQRLEESSTSCEIRTVEVDCSIVDGDLENLDTDE 59 Query: 349 FCNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTECR 528 C LVN QP CRICLDIGGEDLIAPC CRGTQKYVHRSCLD+WRSTKEGFAFAHCTECR Sbjct: 60 NCALVNADQPQCRICLDIGGEDLIAPCHCRGTQKYVHRSCLDNWRSTKEGFAFAHCTECR 119 Query: 529 ALFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXXYKFYGEDLREMFGY 708 A+FILRANVPPDRWWLRLKFQ LV RDHAFIF YKFYGE+LREMFGY Sbjct: 120 AVFILRANVPPDRWWLRLKFQLLVARDHAFIFVIVQLIVAFLGVLVYKFYGEELREMFGY 179 Query: 709 EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDNK 888 +EHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VVE+RE NK Sbjct: 180 DEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREVNK 239 Query: 889 APPELDPSYVTELKMLGLY 945 PELDPS+VTEL+MLGLY Sbjct: 240 DVPELDPSHVTELRMLGLY 258 >ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycine max] gi|255638130|gb|ACU19379.1| unknown [Glycine max] Length = 257 Score = 370 bits (951), Expect = e-100 Identities = 187/259 (72%), Positives = 201/259 (77%), Gaps = 20/259 (7%) Frame = +1 Query: 229 MQLVSTGSSGTEDISETEPIL-------PQSDESPFSCEIRPLVD-------------DE 348 MQL S G E+ SE+EPIL P ES FSCEI P+ DE Sbjct: 1 MQLASNGDK--EECSESEPILNHHHLHLPPPGESSFSCEIIPISAAASGDDDLQNVRVDE 58 Query: 349 FCNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTECR 528 C+LVN QP CRICLDIGGEDLIAPC C+GTQKYVHRSCLD+WRSTKEGFAF+HCTECR Sbjct: 59 TCHLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECR 118 Query: 529 ALFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXXYKFYGEDLREMFGY 708 A+FILRANVPPDRWWLRLKFQFLV RDHAFIF YKFYG++LREMFGY Sbjct: 119 AVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFGY 178 Query: 709 EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDNK 888 EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VVE+RE K Sbjct: 179 EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVK 238 Query: 889 APPELDPSYVTELKMLGLY 945 PELDPS+VTEL+MLGLY Sbjct: 239 NVPELDPSHVTELRMLGLY 257 >ref|XP_002513323.1| membrane associated ring finger 1,8, putative [Ricinus communis] gi|223547231|gb|EEF48726.1| membrane associated ring finger 1,8, putative [Ricinus communis] Length = 256 Score = 363 bits (932), Expect = 6e-98 Identities = 186/257 (72%), Positives = 199/257 (77%), Gaps = 18/257 (7%) Frame = +1 Query: 229 MQLVSTGSSGTEDISETEPILPQS------DESPFSCEIRPLVDD------------EFC 354 MQLVS S EDISE EPIL QS +ES SCEI + D E C Sbjct: 1 MQLVSNDSQ-KEDISEREPILRQSNIVQRSEESSSSCEITSIGQDCDGDDLESVHVDETC 59 Query: 355 NLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTECRAL 534 +LVN QP CRICLD GGEDLIAPC C+GTQKYVHRSCLD+WRSTKEGFAFAHCTECRA Sbjct: 60 HLVNPDQPQCRICLDNGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRAS 119 Query: 535 FILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXXYKFYGEDLREMFGYEE 714 FILRANVPPDRWWLRLKFQFLV RDH FIF YKFYGE+LREMFGYEE Sbjct: 120 FILRANVPPDRWWLRLKFQFLVARDHVFIFVVVQLIVAFLGMFVYKFYGEELREMFGYEE 179 Query: 715 HPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDNKAP 894 HPYGFYT+AVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VVE+RE +K Sbjct: 180 HPYGFYTVAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREASKNV 239 Query: 895 PELDPSYVTELKMLGLY 945 PELD ++VTEL+MLGLY Sbjct: 240 PELDATHVTELRMLGLY 256 >ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|222864413|gb|EEF01544.1| predicted protein [Populus trichocarpa] Length = 259 Score = 356 bits (913), Expect = 9e-96 Identities = 185/260 (71%), Positives = 200/260 (76%), Gaps = 21/260 (8%) Frame = +1 Query: 229 MQLVSTGSSGTEDISETEPILPQS-------DESPFSCEIRPL-------VDD------- 345 MQLVS S EDISE+EPIL S +ESP S EI+ L VDD Sbjct: 1 MQLVSNDSR-KEDISESEPILSHSNISQHSEEESPSSLEIKSLGRDCEIHVDDSESIQID 59 Query: 346 EFCNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTEC 525 E C+LVN P CRICLD GEDLIAPC C+GTQKYVHRSCLD+WRSTKEGFAFAHCTEC Sbjct: 60 ETCHLVNPDHPQCRICLDNEGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTEC 119 Query: 526 RALFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXXYKFYGEDLREMFG 705 RA+F+LRANVP DRWWLRLKFQFLV RDHAFIF YKFYGE+LREMFG Sbjct: 120 RAMFVLRANVPADRWWLRLKFQFLVARDHAFIFVVVQLIVAFLGVLVYKFYGEELREMFG 179 Query: 706 YEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDN 885 YEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VVE+RE + Sbjct: 180 YEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREAS 239 Query: 886 KAPPELDPSYVTELKMLGLY 945 K PEL S+V+EL+MLGLY Sbjct: 240 KDVPELGASHVSELRMLGLY 259 >ref|XP_004144419.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1-like [Cucumis sativus] gi|449519260|ref|XP_004166653.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1-like [Cucumis sativus] Length = 261 Score = 354 bits (909), Expect = 3e-95 Identities = 179/262 (68%), Positives = 195/262 (74%), Gaps = 23/262 (8%) Frame = +1 Query: 229 MQLVSTGSSGTEDISETEPIL------PQSDESPFSCEIRPLVD---------------- 342 MQLV +DI E PIL PQS S S EI ++ Sbjct: 1 MQLVPNHDENKDDILERAPILSQLDFLPQSVGSSSSAEIAEIIAIGRESSVSDDDLHNPN 60 Query: 343 -DEFCNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCT 519 DE C+LVN QP CRICLD GGEDLIAPC C+GTQKYVHRSCLD+WRSTKEGFAFAHCT Sbjct: 61 IDETCHLVND-QPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCT 119 Query: 520 ECRALFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXXYKFYGEDLREM 699 ECRA+F+LRANVPPDRWWLRLKFQFLV RDHAFIF YKFYGE+LREM Sbjct: 120 ECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 179 Query: 700 FGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENRE 879 FGYEEHPYGFY MAVLAI+LVGLLYGFFIAIICGQRINERHYHVLAKQELTKE++VE+RE Sbjct: 180 FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE 239 Query: 880 DNKAPPELDPSYVTELKMLGLY 945 NK PELDPS+V EL++LGLY Sbjct: 240 HNKNVPELDPSHVMELRLLGLY 261