BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007201
         (2460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   733   0.0  
ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2...   711   0.0  
ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putativ...   701   0.0  
ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   681   0.0  
ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   677   0.0  

>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
            vinifera]
          Length = 540

 Score =  733 bits (1891), Expect = 0.0
 Identities = 372/533 (69%), Positives = 438/533 (82%), Gaps = 7/533 (1%)
 Frame = +1

Query: 55   EGNVKATSSSVSNDVEDT---VKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSL 225
            +GN    S  +++D E T   VKERCWDQREA+ GEP CVICGRYGEYICDETDDD+CSL
Sbjct: 6    KGNQGKNSVELTDDNEGTADGVKERCWDQREALPGEPKCVICGRYGEYICDETDDDICSL 65

Query: 226  ECKQTVLSNLAKCWKPEKPAPPVRLPVTDECFYVRD-GDKSGAQHLTSDQIALLRSKIEI 402
            ECKQT+L  +AK   P    PP RLP TDECFYVRD GDKSG+Q LT  Q  +LR ++EI
Sbjct: 66   ECKQTLLCRVAKSRLPVVLPPPKRLPTTDECFYVRDSGDKSGSQSLTGSQTEMLRRRLEI 125

Query: 403  RVKGDSIPPPILAFSSCNLPEKLHLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGS 582
             V+GD    PIL+FSSCNLP+KL  N+EAAGYE+PTPVQMQ+IPAAL GKNLLVSA+TGS
Sbjct: 126  CVRGDFDLSPILSFSSCNLPQKLLQNIEAAGYEIPTPVQMQAIPAALVGKNLLVSADTGS 185

Query: 583  GKTASFLVPVVSLCTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTAL 762
            GKTASFLVP+VS CT+ R  +    KNP+AMVL PTRELC+Q+EEQAKL G+GLPFKTAL
Sbjct: 186  GKTASFLVPIVSRCTSIRPDHSPNQKNPLAMVLTPTRELCMQVEEQAKLLGKGLPFKTAL 245

Query: 763  VVGGEAMSGQIYRIQQGVELIVGTPGRLIDLFTKHDIXXXXXXXXXXXXXXCMLQRGFRD 942
            VVGG+AM  Q++RIQQGVELIVGTPGRLIDL +KH+I              CML+RGFRD
Sbjct: 246  VVGGDAMPRQLHRIQQGVELIVGTPGRLIDLLSKHEIELDDVFMLVLDEVDCMLERGFRD 305

Query: 943  QVIQIFQALFKPQILMYSATISPEVEKMASSMAKDLIYISIGKPNRPIESVKQVIIWVES 1122
            QV+QI++AL +PQ+LMYSATIS EVEK+ASSMAKD+I IS+GK NRP  +VKQ+ IWVES
Sbjct: 306  QVMQIYRALSQPQVLMYSATISQEVEKVASSMAKDIIVISVGKSNRPNIAVKQLAIWVES 365

Query: 1123 KKKKQKLFEIIMSQQHFKPPVVVFVDSKLGAELLSEAITVTTGIKTLSIHGDKPMKERRE 1302
            K+KKQKLF+I+ S+QHF PPVVVFV S+LGA+LL+EAIT+TTG+K LSIHG+K MKERRE
Sbjct: 366  KQKKQKLFDILTSKQHFTPPVVVFVGSRLGADLLTEAITITTGLKALSIHGEKSMKERRE 425

Query: 1303 TLRQFLMGEVSVIVATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAM 1482
             +  FL+GEV V+VATGVL RGVDLL VRQVIVFDMPNSIKEY+HQIGRASRLGEEG A+
Sbjct: 426  IMSSFLVGEVPVMVATGVLSRGVDLLSVRQVIVFDMPNSIKEYVHQIGRASRLGEEGTAI 485

Query: 1483 AFVNEENKNLFQELVEVLKSSRAVVPRELANSRYTMASYSIGK---RQKKRKY 1632
             F+NEEN+NLF ELVE+LKSS A +PRELANSRY + S ++G+   RQKKRK+
Sbjct: 486  LFLNEENRNLFPELVEILKSSGAAIPRELANSRYRLGSVNVGRGQIRQKKRKH 538


>ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1|
            predicted protein [Populus trichocarpa]
          Length = 524

 Score =  711 bits (1836), Expect = 0.0
 Identities = 354/517 (68%), Positives = 420/517 (81%)
 Frame = +1

Query: 82   SVSNDVEDTVKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSLECKQTVLSNLAK 261
            +VS    D VK+   DQREA+ GEP+CV+CGRYGEYICD+TD D+CSLECKQT+L   A 
Sbjct: 10   TVSEAAGDDVKKTSRDQREALPGEPICVVCGRYGEYICDQTDSDICSLECKQTLLGRAAD 69

Query: 262  CWKPEKPAPPVRLPVTDECFYVRDGDKSGAQHLTSDQIALLRSKIEIRVKGDSIPPPILA 441
               P     P RL  TDECFYVRD +      LTSDQ  LLR K+EI VKGDS+P PIL+
Sbjct: 70   THLPVGHPLPKRLAATDECFYVRDSESP----LTSDQTELLRRKLEIHVKGDSVPDPILS 125

Query: 442  FSSCNLPEKLHLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGSGKTASFLVPVVSL 621
            FSSCNLPEKL  N++  GY++PTP+QMQ I AALTGK+LL SA+TGSGKTASFLVPVVS 
Sbjct: 126  FSSCNLPEKLLHNIQTLGYDMPTPIQMQGIAAALTGKSLLASADTGSGKTASFLVPVVSR 185

Query: 622  CTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTALVVGGEAMSGQIYR 801
            C  FR  N +K K P+AMVL PTRELC+Q+EEQAKL G+GLPFKTALV+GG+AM  Q+YR
Sbjct: 186  CATFRHGNISKSKKPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVIGGDAMPRQLYR 245

Query: 802  IQQGVELIVGTPGRLIDLFTKHDIXXXXXXXXXXXXXXCMLQRGFRDQVIQIFQALFKPQ 981
            IQQGVELIVGTPGRLIDL  KHDI              CMLQ+GFRDQV+QIF+AL +PQ
Sbjct: 246  IQQGVELIVGTPGRLIDLLAKHDIELDDIMILVLDEVDCMLQQGFRDQVMQIFRALSQPQ 305

Query: 982  ILMYSATISPEVEKMASSMAKDLIYISIGKPNRPIESVKQVIIWVESKKKKQKLFEIIMS 1161
            +LMYSAT+S EVEKMASSMAKDLI++SIG+PNRP ++VKQ+ IWVESK+KKQKLF+I+MS
Sbjct: 306  VLMYSATMSQEVEKMASSMAKDLIFVSIGQPNRPSKAVKQLAIWVESKQKKQKLFDILMS 365

Query: 1162 QQHFKPPVVVFVDSKLGAELLSEAITVTTGIKTLSIHGDKPMKERRETLRQFLMGEVSVI 1341
            +QHF PP +V+V S++GA+LLS AITVTTG+K LSIHG+K MKERRE ++ FL+GEV ++
Sbjct: 366  KQHFLPPSIVYVGSRIGADLLSNAITVTTGLKALSIHGEKSMKERREIMKSFLVGEVPLV 425

Query: 1342 VATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAMAFVNEENKNLFQE 1521
            VATGVLGRGVDLL VRQVIVFDMPN IKEY+HQIGRASR+GE+G ++ FVNEEN+NLF +
Sbjct: 426  VATGVLGRGVDLLGVRQVIVFDMPNCIKEYVHQIGRASRMGEDGTSIVFVNEENRNLFPD 485

Query: 1522 LVEVLKSSRAVVPRELANSRYTMASYSIGKRQKKRKY 1632
            LVEVLKSS AV+PREL NSRY   S+ +GK Q+KRKY
Sbjct: 486  LVEVLKSSGAVIPRELVNSRYVKRSFPMGKGQRKRKY 522


>ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 514

 Score =  701 bits (1810), Expect = 0.0
 Identities = 355/523 (67%), Positives = 425/523 (81%)
 Frame = +1

Query: 64   VKATSSSVSNDVEDTVKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSLECKQTV 243
            V    S  ++DV+ T +E    QREA+ GEP CV+CGRYGEYICDETDDD+CSLECKQ +
Sbjct: 3    VACAGSDGASDVKKTSRE----QREALQGEPKCVLCGRYGEYICDETDDDICSLECKQIL 58

Query: 244  LSNLAKCWKPEKPAPPVRLPVTDECFYVRDGDKSGAQHLTSDQIALLRSKIEIRVKGDSI 423
            L  + K        PP RL  TDECFYVR+   +G   LT+DQ  LLR  +EI VKG+ +
Sbjct: 59   LGGVGKSDISVGIPPPRRLAATDECFYVRE---NGTSSLTNDQTELLRRTLEIHVKGELV 115

Query: 424  PPPILAFSSCNLPEKLHLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGSGKTASFL 603
            P PIL+FSSCNLP+KL LNLEAAGY++PTPVQMQ+IP AL+GK+LL SA+TGSGKTAS+L
Sbjct: 116  PDPILSFSSCNLPQKLLLNLEAAGYDLPTPVQMQAIPTALSGKSLLASADTGSGKTASYL 175

Query: 604  VPVVSLCTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTALVVGGEAM 783
            VP++S C ++R   H+  + P+AMVL PTRELC+Q+E+QAKLFG+GLPFKTALVVGG+AM
Sbjct: 176  VPIISSCASYRLQ-HSSDRKPLAMVLTPTRELCIQVEDQAKLFGKGLPFKTALVVGGDAM 234

Query: 784  SGQIYRIQQGVELIVGTPGRLIDLFTKHDIXXXXXXXXXXXXXXCMLQRGFRDQVIQIFQ 963
            +GQ+YRIQQGVELIVGTPGRLIDL TKHDI              CMLQRGFRDQV+QIF 
Sbjct: 235  AGQLYRIQQGVELIVGTPGRLIDLLTKHDIELDNMIIFVIDEVDCMLQRGFRDQVMQIFW 294

Query: 964  ALFKPQILMYSATISPEVEKMASSMAKDLIYISIGKPNRPIESVKQVIIWVESKKKKQKL 1143
            AL +PQ+L+YSAT++ EVEKMASSMAKD+  +SIG+PNRP ++VKQ+ IWVE K+KKQKL
Sbjct: 295  ALSQPQVLLYSATVTQEVEKMASSMAKDMALVSIGQPNRPSKAVKQLAIWVEPKQKKQKL 354

Query: 1144 FEIIMSQQHFKPPVVVFVDSKLGAELLSEAITVTTGIKTLSIHGDKPMKERRETLRQFLM 1323
            F+I+MS+QHF PP VV+V S+LGA+LLS AITVTTG K+LSIHG+K MKERRE ++ FL+
Sbjct: 355  FDILMSKQHFMPPAVVYVGSRLGADLLSNAITVTTGWKSLSIHGEKSMKERREIMKSFLV 414

Query: 1324 GEVSVIVATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAMAFVNEEN 1503
            GEV+VIVATGVLGRGVDL  VRQVI+FDMPNSIKEYIHQIGRASR+GE G+A+ FVNEEN
Sbjct: 415  GEVTVIVATGVLGRGVDLFGVRQVIIFDMPNSIKEYIHQIGRASRMGEGGIAIVFVNEEN 474

Query: 1504 KNLFQELVEVLKSSRAVVPRELANSRYTMASYSIGKRQKKRKY 1632
            KNLF E +EVLKSS AV+PRELANSR     YS+GK QKKRKY
Sbjct: 475  KNLFPEFIEVLKSSAAVIPRELANSR-----YSVGKGQKKRKY 512


>ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine max]
          Length = 528

 Score =  681 bits (1757), Expect = 0.0
 Identities = 343/521 (65%), Positives = 418/521 (80%), Gaps = 1/521 (0%)
 Frame = +1

Query: 73   TSSSVSNDVEDTVKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSLECKQTVLSN 252
            T +   NDVED VK R  DQR A+ GEP C+ICGRYGEYICDETDDDVCSLECKQ +L  
Sbjct: 15   TDAEAPNDVEDDVKLRSRDQRLALPGEPKCIICGRYGEYICDETDDDVCSLECKQALLCR 74

Query: 253  LAKCWKPEKPAPPVRLPVTDECFYVRDGD-KSGAQHLTSDQIALLRSKIEIRVKGDSIPP 429
            +AK   P    PP  +P  DECFYVRD D KSG   + SD    LR K++IRVKGD + P
Sbjct: 75   IAKSLSP----PPKTIPAADECFYVRDSDFKSGTVSMGSD----LRKKLDIRVKGDVVAP 126

Query: 430  PILAFSSCNLPEKLHLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGSGKTASFLVP 609
             +L+FS+CNLP+KL  N+EAAGYE+PTPVQMQ+IPAALTGK++LV A+TGSGK+ASFL+P
Sbjct: 127  -VLSFSACNLPDKLLHNIEAAGYEMPTPVQMQAIPAALTGKSMLVLADTGSGKSASFLIP 185

Query: 610  VVSLCTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTALVVGGEAMSG 789
            +VS C   R    +  K P+AMVL PTRELC+Q+EE AKL G+GLPFKTALVVGG+AM+G
Sbjct: 186  IVSRCVIHRRQYFSGKKKPLAMVLTPTRELCIQVEEHAKLLGKGLPFKTALVVGGDAMAG 245

Query: 790  QIYRIQQGVELIVGTPGRLIDLFTKHDIXXXXXXXXXXXXXXCMLQRGFRDQVIQIFQAL 969
            Q++RIQQGVELIVGTPGRL+DL  KH+I              CMLQRGFRDQV+QI++AL
Sbjct: 246  QLHRIQQGVELIVGTPGRLVDLLMKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIYRAL 305

Query: 970  FKPQILMYSATISPEVEKMASSMAKDLIYISIGKPNRPIESVKQVIIWVESKKKKQKLFE 1149
             +PQ+LMYSAT+S ++EKM +++AK ++ +SIG+PN P ++VKQ+ IWVESK+KKQKLFE
Sbjct: 306  SQPQVLMYSATMSNDLEKMINTLAKGMVVMSIGEPNTPNKAVKQLAIWVESKQKKQKLFE 365

Query: 1150 IIMSQQHFKPPVVVFVDSKLGAELLSEAITVTTGIKTLSIHGDKPMKERRETLRQFLMGE 1329
            I+ S++HFKPPVVV+V S+LGA+LL+ AITV TGIK +SIHG+K MKERRET++ FL+GE
Sbjct: 366  ILASKKHFKPPVVVYVGSRLGADLLANAITVATGIKAVSIHGEKSMKERRETMQSFLVGE 425

Query: 1330 VSVIVATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAMAFVNEENKN 1509
            V V+VATGVLGRGVDLL VRQVIVFDMPN+IKEY+HQIGRASR+GEEG  + FVNEENKN
Sbjct: 426  VPVVVATGVLGRGVDLLGVRQVIVFDMPNNIKEYVHQIGRASRMGEEGQGIVFVNEENKN 485

Query: 1510 LFQELVEVLKSSRAVVPRELANSRYTMASYSIGKRQKKRKY 1632
            +F EL++VLKS  A VPRELANSRY    +S GK  KKRK+
Sbjct: 486  VFAELIDVLKSGGAAVPRELANSRYATRVFSGGKGSKKRKH 526


>ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine max]
          Length = 528

 Score =  677 bits (1748), Expect = 0.0
 Identities = 339/522 (64%), Positives = 418/522 (80%), Gaps = 1/522 (0%)
 Frame = +1

Query: 70   ATSSSVSNDVEDTVKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSLECKQTVLS 249
            AT +   ND ED VK R  DQR A+ GEP C+ICGRYGEYICDETDDDVCSLECKQ +L 
Sbjct: 14   ATDTDAPNDAEDEVKLRSRDQRLALPGEPKCIICGRYGEYICDETDDDVCSLECKQALLC 73

Query: 250  NLAKCWKPEKPAPPVRLPVTDECFYVRDGD-KSGAQHLTSDQIALLRSKIEIRVKGDSIP 426
             +AK   P    PP R+P  DECFYV+D D +SG   + SD    LR K++I VKGD + 
Sbjct: 74   RIAKSSSP----PPKRIPAADECFYVKDADYESGTASMASD----LRKKLDIHVKGDVVA 125

Query: 427  PPILAFSSCNLPEKLHLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGSGKTASFLV 606
            P +L+FS+CNLP+KL  N+EAAGYE+PTPVQMQ+IPAALTGK++L+ A+TGSGK+ASFL+
Sbjct: 126  P-VLSFSACNLPDKLLHNIEAAGYEMPTPVQMQAIPAALTGKSMLLLADTGSGKSASFLI 184

Query: 607  PVVSLCTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTALVVGGEAMS 786
            P+VS C   R    +  KNP+A+VL PTRELC+Q+EE AKL G+G+PFKTALVVGG+AM+
Sbjct: 185  PIVSRCAIHRRQYVSDKKNPLALVLTPTRELCMQVEEHAKLLGKGMPFKTALVVGGDAMA 244

Query: 787  GQIYRIQQGVELIVGTPGRLIDLFTKHDIXXXXXXXXXXXXXXCMLQRGFRDQVIQIFQA 966
            GQ++RIQQGVELIVGTPGRL+DL TKH+I              CMLQRGFRDQV+QI++A
Sbjct: 245  GQLHRIQQGVELIVGTPGRLVDLLTKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIYRA 304

Query: 967  LFKPQILMYSATISPEVEKMASSMAKDLIYISIGKPNRPIESVKQVIIWVESKKKKQKLF 1146
            L +PQ+LMYSAT+S ++EKM +++ K  + IS+G+PN P ++VKQ+ IWVESK+KKQKLF
Sbjct: 305  LSQPQVLMYSATMSNDLEKMINTLVKGTVVISVGEPNTPNKAVKQLAIWVESKEKKQKLF 364

Query: 1147 EIIMSQQHFKPPVVVFVDSKLGAELLSEAITVTTGIKTLSIHGDKPMKERRETLRQFLMG 1326
            EI+ S++HFKPPVVV+V S+LGA+LL+ AITV+TGIK +SIHG+K MKERRET++  L+G
Sbjct: 365  EILESKKHFKPPVVVYVGSRLGADLLANAITVSTGIKAVSIHGEKSMKERRETMQSLLVG 424

Query: 1327 EVSVIVATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAMAFVNEENK 1506
            EV V+VATGVLGRGVDLL VRQVIVFDMPN+IKEY+HQIGRASR+GEEG  + FVNEENK
Sbjct: 425  EVPVVVATGVLGRGVDLLGVRQVIVFDMPNNIKEYVHQIGRASRMGEEGQGIVFVNEENK 484

Query: 1507 NLFQELVEVLKSSRAVVPRELANSRYTMASYSIGKRQKKRKY 1632
            N+F EL+EVLKS  A VPRELANSRY    +S GK  KKRK+
Sbjct: 485  NIFAELIEVLKSGGAAVPRELANSRYATGVFSGGKGSKKRKH 526