BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007199
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like...    78   4e-12
emb|CBI40419.3| unnamed protein product [Vitis vinifera]               78   4e-12
emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]    78   4e-12
ref|XP_002880221.1| zinc finger family protein [Arabidopsis lyra...    76   2e-11
ref|NP_182139.1| RING-H2 finger protein ATL67 [Arabidopsis thali...    76   2e-11

>ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like [Cucumis sativus]
           gi|449480258|ref|XP_004155843.1| PREDICTED: RING-H2
           finger protein ATL67-like [Cucumis sativus]
          Length = 184

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 40/73 (54%), Positives = 51/73 (69%)
 Frame = +3

Query: 48  GVIIPRIIFVAXXXXXXXXXXXXXXSVAGLDQMVINSYPKFPFSKSKNIGANGDLVCSIC 227
           G+I+P+IIFVA               V GLDQ VINSYPKFPFS+ K++ A  + VCSIC
Sbjct: 61  GIILPQIIFVAEDDAAPDRDDDN--GVVGLDQTVINSYPKFPFSRDKSM-AGANCVCSIC 117

Query: 228 LCDYKESEMLRMI 266
           LC+YK++EMLRM+
Sbjct: 118 LCEYKDAEMLRMM 130


>emb|CBI40419.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 41/76 (53%), Positives = 52/76 (68%)
 Frame = +3

Query: 39  NTEGVIIPRIIFVAXXXXXXXXXXXXXXSVAGLDQMVINSYPKFPFSKSKNIGANGDLVC 218
           +++G+++PRIIFVA               V GLDQ VI+SYPKFPFSKS     + D VC
Sbjct: 134 SSDGIVLPRIIFVAEDEDEDQNV------VVGLDQAVIDSYPKFPFSKSNT---HLDSVC 184

Query: 219 SICLCDYKESEMLRMI 266
           SICLC+YK+SEMLRM+
Sbjct: 185 SICLCEYKDSEMLRML 200


>emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]
          Length = 641

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 41/76 (53%), Positives = 52/76 (68%)
 Frame = +3

Query: 39  NTEGVIIPRIIFVAXXXXXXXXXXXXXXSVAGLDQMVINSYPKFPFSKSKNIGANGDLVC 218
           +++G+++PRIIFVA               V GLDQ VI+SYPKFPFSKS     + D VC
Sbjct: 77  SSDGIVLPRIIFVAEDEDEDQNV------VVGLDQAVIDSYPKFPFSKSNT---HLDSVC 127

Query: 219 SICLCDYKESEMLRMI 266
           SICLC+YK+SEMLRM+
Sbjct: 128 SICLCEYKDSEMLRML 143


>ref|XP_002880221.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326060|gb|EFH56480.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
 Frame = +3

Query: 51  VIIPRIIFVAXXXXXXXXXXXXXXSVAGLDQMVINSYPKFPFSK------SKNIGANGDL 212
           VI+PRIIFVA               V GLDQ VINSYPKF FSK      S   G  GD 
Sbjct: 80  VILPRIIFVAEEDNEDLEAGDV---VVGLDQAVINSYPKFHFSKDSSAASSDGFGGGGDT 136

Query: 213 VCSICLCDYKESEMLRMI 266
            CSICLC+YKE+EMLRM+
Sbjct: 137 TCSICLCEYKEAEMLRMM 154


>ref|NP_182139.1| RING-H2 finger protein ATL67 [Arabidopsis thaliana]
           gi|68565091|sp|O82353.1|ATL67_ARATH RecName:
           Full=RING-H2 finger protein ATL67
           gi|3702333|gb|AAC62890.1| hypothetical protein
           [Arabidopsis thaliana] gi|18491265|gb|AAL69457.1|
           At2g46160/T3F17.19 [Arabidopsis thaliana]
           gi|330255556|gb|AEC10650.1| RING-H2 finger protein ATL67
           [Arabidopsis thaliana]
          Length = 214

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
 Frame = +3

Query: 51  VIIPRIIFVAXXXXXXXXXXXXXXSVAGLDQMVINSYPKFPFSK------SKNIGANGDL 212
           VI+PRIIFVA               V GLDQ VINSYPKF FSK      S   G  GD 
Sbjct: 80  VILPRIIFVAEEDNEDLEAGDV---VVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDT 136

Query: 213 VCSICLCDYKESEMLRMI 266
            CSICLC+YKE+EMLRM+
Sbjct: 137 TCSICLCEYKEAEMLRMM 154