BLASTX nr result
ID: Coptis25_contig00007199
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007199 (1065 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like... 78 4e-12 emb|CBI40419.3| unnamed protein product [Vitis vinifera] 78 4e-12 emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera] 78 4e-12 ref|XP_002880221.1| zinc finger family protein [Arabidopsis lyra... 76 2e-11 ref|NP_182139.1| RING-H2 finger protein ATL67 [Arabidopsis thali... 76 2e-11 >ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like [Cucumis sativus] gi|449480258|ref|XP_004155843.1| PREDICTED: RING-H2 finger protein ATL67-like [Cucumis sativus] Length = 184 Score = 77.8 bits (190), Expect = 4e-12 Identities = 40/73 (54%), Positives = 51/73 (69%) Frame = +3 Query: 48 GVIIPRIIFVAXXXXXXXXXXXXXXSVAGLDQMVINSYPKFPFSKSKNIGANGDLVCSIC 227 G+I+P+IIFVA V GLDQ VINSYPKFPFS+ K++ A + VCSIC Sbjct: 61 GIILPQIIFVAEDDAAPDRDDDN--GVVGLDQTVINSYPKFPFSRDKSM-AGANCVCSIC 117 Query: 228 LCDYKESEMLRMI 266 LC+YK++EMLRM+ Sbjct: 118 LCEYKDAEMLRMM 130 >emb|CBI40419.3| unnamed protein product [Vitis vinifera] Length = 279 Score = 77.8 bits (190), Expect = 4e-12 Identities = 41/76 (53%), Positives = 52/76 (68%) Frame = +3 Query: 39 NTEGVIIPRIIFVAXXXXXXXXXXXXXXSVAGLDQMVINSYPKFPFSKSKNIGANGDLVC 218 +++G+++PRIIFVA V GLDQ VI+SYPKFPFSKS + D VC Sbjct: 134 SSDGIVLPRIIFVAEDEDEDQNV------VVGLDQAVIDSYPKFPFSKSNT---HLDSVC 184 Query: 219 SICLCDYKESEMLRMI 266 SICLC+YK+SEMLRM+ Sbjct: 185 SICLCEYKDSEMLRML 200 >emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera] Length = 641 Score = 77.8 bits (190), Expect = 4e-12 Identities = 41/76 (53%), Positives = 52/76 (68%) Frame = +3 Query: 39 NTEGVIIPRIIFVAXXXXXXXXXXXXXXSVAGLDQMVINSYPKFPFSKSKNIGANGDLVC 218 +++G+++PRIIFVA V GLDQ VI+SYPKFPFSKS + D VC Sbjct: 77 SSDGIVLPRIIFVAEDEDEDQNV------VVGLDQAVIDSYPKFPFSKSNT---HLDSVC 127 Query: 219 SICLCDYKESEMLRMI 266 SICLC+YK+SEMLRM+ Sbjct: 128 SICLCEYKDSEMLRML 143 >ref|XP_002880221.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297326060|gb|EFH56480.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] Length = 214 Score = 75.9 bits (185), Expect = 2e-11 Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 6/78 (7%) Frame = +3 Query: 51 VIIPRIIFVAXXXXXXXXXXXXXXSVAGLDQMVINSYPKFPFSK------SKNIGANGDL 212 VI+PRIIFVA V GLDQ VINSYPKF FSK S G GD Sbjct: 80 VILPRIIFVAEEDNEDLEAGDV---VVGLDQAVINSYPKFHFSKDSSAASSDGFGGGGDT 136 Query: 213 VCSICLCDYKESEMLRMI 266 CSICLC+YKE+EMLRM+ Sbjct: 137 TCSICLCEYKEAEMLRMM 154 >ref|NP_182139.1| RING-H2 finger protein ATL67 [Arabidopsis thaliana] gi|68565091|sp|O82353.1|ATL67_ARATH RecName: Full=RING-H2 finger protein ATL67 gi|3702333|gb|AAC62890.1| hypothetical protein [Arabidopsis thaliana] gi|18491265|gb|AAL69457.1| At2g46160/T3F17.19 [Arabidopsis thaliana] gi|330255556|gb|AEC10650.1| RING-H2 finger protein ATL67 [Arabidopsis thaliana] Length = 214 Score = 75.9 bits (185), Expect = 2e-11 Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 6/78 (7%) Frame = +3 Query: 51 VIIPRIIFVAXXXXXXXXXXXXXXSVAGLDQMVINSYPKFPFSK------SKNIGANGDL 212 VI+PRIIFVA V GLDQ VINSYPKF FSK S G GD Sbjct: 80 VILPRIIFVAEEDNEDLEAGDV---VVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDT 136 Query: 213 VCSICLCDYKESEMLRMI 266 CSICLC+YKE+EMLRM+ Sbjct: 137 TCSICLCEYKEAEMLRMM 154