BLASTX nr result

ID: Coptis25_contig00007197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007197
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636184.1| Tryptophanyl-tRNA synthetase [Medicago trunc...   154   6e-36
ref|XP_002530195.1| tryptophanyl-tRNA synthetase, putative [Rici...   152   2e-35
ref|XP_004142265.1| PREDICTED: tryptophan--tRNA ligase, cytoplas...   152   4e-35
ref|XP_003521058.1| PREDICTED: tryptophanyl-tRNA synthetase, cyt...   152   4e-35
ref|XP_002275626.1| PREDICTED: tryptophanyl-tRNA synthetase, cyt...   151   5e-35

>ref|XP_003636184.1| Tryptophanyl-tRNA synthetase [Medicago truncatula]
           gi|355502119|gb|AES83322.1| Tryptophanyl-tRNA synthetase
           [Medicago truncatula]
          Length = 401

 Score =  154 bits (390), Expect = 6e-36
 Identities = 81/131 (61%), Positives = 94/131 (71%), Gaps = 24/131 (18%)
 Frame = -3

Query: 442 PCSSGEAGKMSAGDPNSAIYLTDSDKMIRSKV------------------------DIPV 335
           P   GE GKMSA DPNSAIY+TDS K I++KV                        DIP+
Sbjct: 271 PALQGETGKMSASDPNSAIYVTDSAKDIKNKVNRYAFSGGQDSIEKHRQLGANLEVDIPI 330

Query: 334 KYLSFFLEDDADLEHIKQEYGAGRMLTGQVKSRLIEVLTALVTRHREARSKVTDEVVDAF 155
           KYLSFFLEDDA+LEHIK+EYGAGRMLTG+VK RLI+VLT +V RHR AR+ VT+++VDAF
Sbjct: 331 KYLSFFLEDDAELEHIKKEYGAGRMLTGEVKQRLIQVLTEIVERHRTARANVTEKMVDAF 390

Query: 154 MAVRPLPRMFD 122
           MAVRPLP MFD
Sbjct: 391 MAVRPLPHMFD 401



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = -1

Query: 510 RMTRDVAPRIGYDKPALIESLFFPALQGRREK 415
           RMTRDVAP+IGY+KPALIES FFPALQG   K
Sbjct: 248 RMTRDVAPKIGYNKPALIESSFFPALQGETGK 279


>ref|XP_002530195.1| tryptophanyl-tRNA synthetase, putative [Ricinus communis]
           gi|223530288|gb|EEF32185.1| tryptophanyl-tRNA
           synthetase, putative [Ricinus communis]
          Length = 405

 Score =  152 bits (385), Expect = 2e-35
 Identities = 83/131 (63%), Positives = 90/131 (68%), Gaps = 24/131 (18%)
 Frame = -3

Query: 442 PCSSGEAGKMSAGDPNSAIYLTDSDKMIRSK------------------------VDIPV 335
           P   GE GKMSA DPNSAIYLTDS K I++K                        VDIPV
Sbjct: 275 PALQGETGKMSASDPNSAIYLTDSAKEIKNKINKYAFSGGQDSLEKHRKYGANLEVDIPV 334

Query: 334 KYLSFFLEDDADLEHIKQEYGAGRMLTGQVKSRLIEVLTALVTRHREARSKVTDEVVDAF 155
           KYL+FFLEDD +LEHIK EY AGRMLTG+VK RL EVLT +V RHR ARS VTDE+VDAF
Sbjct: 335 KYLNFFLEDDDELEHIKTEYAAGRMLTGEVKKRLAEVLTEIVERHRVARSAVTDEMVDAF 394

Query: 154 MAVRPLPRMFD 122
           MAVRPLP MFD
Sbjct: 395 MAVRPLPNMFD 405



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -1

Query: 510 RMTRDVAPRIGYDKPALIESLFFPALQGRREK 415
           RMTRDVAPR+G+ KP+LIESLFFPALQG   K
Sbjct: 252 RMTRDVAPRLGFHKPSLIESLFFPALQGETGK 283


>ref|XP_004142265.1| PREDICTED: tryptophan--tRNA ligase, cytoplasmic-like [Cucumis
           sativus]
          Length = 405

 Score =  152 bits (383), Expect = 4e-35
 Identities = 80/131 (61%), Positives = 92/131 (70%), Gaps = 24/131 (18%)
 Frame = -3

Query: 442 PCSSGEAGKMSAGDPNSAIYLTDSDKMIRSK------------------------VDIPV 335
           P   GE GKMSA DPNSAIY+TDS K I++K                        VDIP 
Sbjct: 275 PALQGETGKMSASDPNSAIYVTDSAKDIKNKINKYAFSGGQDSIEKHRLYGANLEVDIPT 334

Query: 334 KYLSFFLEDDADLEHIKQEYGAGRMLTGQVKSRLIEVLTALVTRHREARSKVTDEVVDAF 155
           KYL+FFL+DDA+LEHI +EYGAGRMLTG+VK RLI+VLT +V RHR AR+ VTDE+VDAF
Sbjct: 335 KYLNFFLDDDAELEHITKEYGAGRMLTGEVKQRLIQVLTEMVERHRRARAAVTDEMVDAF 394

Query: 154 MAVRPLPRMFD 122
           MAVRPLP MFD
Sbjct: 395 MAVRPLPNMFD 405



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = -1

Query: 510 RMTRDVAPRIGYDKPALIESLFFPALQGRREK 415
           RMTRDVAPR+GY KPALIES FFPALQG   K
Sbjct: 252 RMTRDVAPRLGYHKPALIESSFFPALQGETGK 283


>ref|XP_003521058.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like [Glycine
           max]
          Length = 404

 Score =  152 bits (383), Expect = 4e-35
 Identities = 80/131 (61%), Positives = 92/131 (70%), Gaps = 24/131 (18%)
 Frame = -3

Query: 442 PCSSGEAGKMSAGDPNSAIYLTDSDKMIRSKV------------------------DIPV 335
           P   GE GKMSA DPNSAIY+TDS K I++KV                        DIPV
Sbjct: 274 PALQGETGKMSASDPNSAIYVTDSAKDIKNKVNKHAFSGGQDSIEKHRQLGANLEVDIPV 333

Query: 334 KYLSFFLEDDADLEHIKQEYGAGRMLTGQVKSRLIEVLTALVTRHREARSKVTDEVVDAF 155
           KYL+FFLEDD +LEHIK+EYG GRMLTG+VK RLI+VLT LV RHR AR+ VT+E+VDAF
Sbjct: 334 KYLTFFLEDDDELEHIKKEYGEGRMLTGEVKQRLIQVLTELVERHRRARASVTEEMVDAF 393

Query: 154 MAVRPLPRMFD 122
           MA+RPLP MFD
Sbjct: 394 MAIRPLPHMFD 404


>ref|XP_002275626.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic [Vitis
           vinifera] gi|302143316|emb|CBI21877.3| unnamed protein
           product [Vitis vinifera]
          Length = 399

 Score =  151 bits (382), Expect = 5e-35
 Identities = 81/131 (61%), Positives = 91/131 (69%), Gaps = 24/131 (18%)
 Frame = -3

Query: 442 PCSSGEAGKMSAGDPNSAIYLTDSDKMIRSK------------------------VDIPV 335
           P   GE GKMSA DPNSAIY+TDS K I++K                        VDIP+
Sbjct: 269 PALQGETGKMSASDPNSAIYVTDSGKDIKNKINKYAFSGGQDSIENHRKYGANLEVDIPI 328

Query: 334 KYLSFFLEDDADLEHIKQEYGAGRMLTGQVKSRLIEVLTALVTRHREARSKVTDEVVDAF 155
           KYL FFLEDDA+LE+I+ EYGAGRMLTG VK RLIEVLT LV RHR AR+ VTDE+VDAF
Sbjct: 329 KYLGFFLEDDAELEYIRTEYGAGRMLTGDVKKRLIEVLTELVERHRRARAAVTDEMVDAF 388

Query: 154 MAVRPLPRMFD 122
           MAVRPLP MF+
Sbjct: 389 MAVRPLPNMFN 399



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/32 (87%), Positives = 28/32 (87%)
 Frame = -1

Query: 510 RMTRDVAPRIGYDKPALIESLFFPALQGRREK 415
           RMTRDVAPRIGY KPALIESLFFPALQG   K
Sbjct: 246 RMTRDVAPRIGYHKPALIESLFFPALQGETGK 277


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