BLASTX nr result

ID: Coptis25_contig00007189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007189
         (2321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]   266   2e-68
emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]   219   3e-54
ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|2...   217   1e-53
ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|2...   214   6e-53
ref|XP_002534310.1| conserved hypothetical protein [Ricinus comm...   205   5e-50

>emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]
          Length = 422

 Score =  266 bits (679), Expect = 2e-68
 Identities = 182/406 (44%), Positives = 226/406 (55%), Gaps = 29/406 (7%)
 Frame = -1

Query: 1562 TSLFDPLSNYFDVFXXXXXXXXXXXXXPLNLDVVWSRNLRSEPNSTDMXXXXXXXXXXXX 1383
            +S+FDPLSNYFD                LNLD+VWS+ LRS+PN T++            
Sbjct: 23   SSMFDPLSNYFDPLSRSPTQLQNPNSL-LNLDMVWSKTLRSDPNCTEIGGILASSSSTPP 81

Query: 1382 XXTHQDVNRVIIQTPPSSVSLPQGADTSVKASASSS-DPTNVXXXXXXXXXXXXXAPTTV 1206
                Q   R    +   S+  P   + + +A+AS+S D TNV             APTTV
Sbjct: 82   FSGAQGQIRATFPSSLPSMPFPPAPENAARATASASNDQTNVARNPKKRSRASRRAPTTV 141

Query: 1205 LTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXRLDLFSTASTMRSGHLEPNRPPPYLLRPF 1026
            LTTDT+NFRAMVQEFTGI             RLDLF TASTMRSGHL+ + PP YLLRPF
Sbjct: 142  LTTDTTNFRAMVQEFTGIPAQPFTSSPFPRSRLDLFGTASTMRSGHLD-HAPPSYLLRPF 200

Query: 1025 AQK--PSPFAS-----------SNMSPGIAXXXXXXXXXXXXXXXXXXN--YQLLSELGL 891
            AQK  P PFAS           S+M   IA                  +  YQL S+LGL
Sbjct: 201  AQKLQPPPFASPPPSSSSSFSSSSMVDAIASTTNITSGSASNTSSNSTSINYQLPSDLGL 260

Query: 890  SKQSQNLVNM--QNPLLTFQSLLQSTIPPKYPSPNSSGFGDNSQGIL------SNTRMGT 735
             KQ QNL+NM  QNP+L+ QS LQ+  P KYP PNS+  G   QG L      S+ +MG 
Sbjct: 261  VKQPQNLLNMNVQNPILSIQSFLQT--PLKYPHPNSAIMGSKPQGSLEIPSTDSHIKMGG 318

Query: 734  LDEFNMNHGQVRTHLNELPNFGTSD--GMRNDNNFASNCGDGVGSNDGDQGQARSFNENY 561
            L++F ++HG V THL+ LPN  +SD    R+DNN  S   DG+GS+ G+ GQ    N NY
Sbjct: 319  LEDFGLSHGHVNTHLSGLPNLVSSDRTASRSDNNPPS-WNDGLGSSGGNHGQLGPLNGNY 377

Query: 560  GNSQRANSCKLNFSGSSSH---EKGTENVTSRGGEGMVDSWICSSD 432
             NSQR  + K+N+S SSS    +K  ENV++R  EGMV+SWICSSD
Sbjct: 378  NNSQRVTNGKMNYSASSSDFHGDKVPENVSTR-SEGMVESWICSSD 422


>emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]
          Length = 449

 Score =  219 bits (558), Expect = 3e-54
 Identities = 177/461 (38%), Positives = 217/461 (47%), Gaps = 36/461 (7%)
 Frame = -1

Query: 1706 DDEYDSRNESISAFLNPSSSSHXXXXXXXXXXXXXXXXXXXXXXXXXPTSLFDPLSNYFD 1527
            D+EY+SR ESI AFLNPS                             P +LFDP SNY D
Sbjct: 16   DEEYESRPESIPAFLNPSGH--------FGSVSSNPQPPPFPHHQNHPPTLFDPRSNYVD 67

Query: 1526 VFXXXXXXXXXXXXXPLNLDVVWSRNLRSEPNSTDMXXXXXXXXXXXXXXTHQDVNRVII 1347
             F              LNLD VWSR LRSEPN TD                   +    +
Sbjct: 68   AFSQSSANPNANSL--LNLDTVWSRGLRSEPNCTDFGNLTGLSSSSTSSSGQSMLG---V 122

Query: 1346 QTPPSSVSLPQGADTSVKASASS--SDPTNVXXXXXXXXXXXXXAPTTVLTTDTSNFRAM 1173
            Q P          +   +AS++S  SD TNV             APTTVLTTDTSNFRAM
Sbjct: 123  QGPVH--------ENGGRASSASLPSDQTNVVRSSKKRTRASRRAPTTVLTTDTSNFRAM 174

Query: 1172 VQEFTGIXXXXXXXXXXXXXRLDLFSTASTMRSGHLEPNRPPPYLLRPFAQKPSP--FAS 999
            VQEFTGI              LDLF   S+++ GHLEP   P Y LRP   K  P  F S
Sbjct: 175  VQEFTGIPAPPFSASPYSRR-LDLFGAGSSIKPGHLEP-LGPLYPLRPSPHKVQPNLFVS 232

Query: 998  SNMSPGIAXXXXXXXXXXXXXXXXXXN-----------------------YQLLSELGLS 888
            S+ SP  +                                          YQL S+ G  
Sbjct: 233  SSSSPSPSFFNSTIGDSIVSTTNIATTSTNNIITTSMAAATNAINSGSNTYQLPSDPGFP 292

Query: 887  KQSQNLVNMQNPLLTFQSLLQS--TIPPKYPSPNSSGFGDNSQGILSNTRMGTLDEFNMN 714
            KQ QN++ MQNP+L+FQSLLQS  + P KYP  +   FG  S   L+   + + +E  + 
Sbjct: 293  KQPQNVLGMQNPILSFQSLLQSPPSHPLKYPLADVPVFGTKSPASLT-LPLPSFEELGVP 351

Query: 713  HGQVRTHLNELPNFGTSDG---MRNDNNFASNCG-DGVGSNDGDQGQARSFNENYGNSQR 546
            HG V  +++ LP+  TS G   +R D+N    C  DG GSN+G + Q R FN NYG+S +
Sbjct: 352  HGHVNANISGLPSHATSGGSRRLRTDDN--GTCWRDGAGSNEGSREQLRPFNGNYGDSPQ 409

Query: 545  ANSCKLNFSGSSS---HEKGTENVTSRGGEGMVDSWICSSD 432
             +S KLN S SSS    EKG++NV+SR GEG VDSWIC SD
Sbjct: 410  VSSFKLNCSASSSAFHPEKGSDNVSSR-GEGTVDSWICPSD 449


>ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|222856542|gb|EEE94089.1|
            predicted protein [Populus trichocarpa]
          Length = 510

 Score =  217 bits (553), Expect = 1e-53
 Identities = 193/503 (38%), Positives = 233/503 (46%), Gaps = 78/503 (15%)
 Frame = -1

Query: 1706 DDEYDS-RNESISAFLNPSSS-----SHXXXXXXXXXXXXXXXXXXXXXXXXXPTSLFDP 1545
            D+EYDS R ESISAFLN +++     SH                          T  FDP
Sbjct: 16   DEEYDSSRAESISAFLNSNNNKNNPFSHVGPMPHNQPPEPDHHHHQSHHSSSSSTMFFDP 75

Query: 1544 LSNYFDVFXXXXXXXXXXXXXPLN------LDVVWSRNLRSEPNSTDMXXXXXXXXXXXX 1383
             SNYFD                 N      LD+VWS+NLRS+PN TD+            
Sbjct: 76   FSNYFDPLAPSSSSSRSPLQSLTNPNSLNNLDMVWSKNLRSDPNCTDLGGFISSSLPTQQ 135

Query: 1382 XXTHQDVNRVIIQTPPSSVSLPQGADTSVKASASSSDP------TNVXXXXXXXXXXXXX 1221
               +Q  NR   Q+ PS     Q + T V  S S S        T               
Sbjct: 136  FT-NQTQNRTTFQSLPSH---GQESATRVPGSGSVSGTNDQVSNTAGIRNPKKRSRASRR 191

Query: 1220 APTTVLTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXRLDLFSTA-STMRSG---HLEPNR 1053
            APTTVL+TDT+NFRAMVQEFTGI             RLDLF TA ST+RS    HL+P+ 
Sbjct: 192  APTTVLSTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAASTLRSAVSQHLDPS- 250

Query: 1052 PPPYLLRPFAQK-----PSPFASS---------NMSPGIAXXXXXXXXXXXXXXXXXXN- 918
            PPPYLL PFA+K     P PF SS         +M   IA                  N 
Sbjct: 251  PPPYLLGPFAKKFQPPPPPPFVSSGSAASSFSASMVDAIASTTATNINGTCTNTTISNNI 310

Query: 917  ------YQLLSELGLSKQSQNLVNM--QNPLLTFQSLLQSTIPPKYP---SPNSSGFGDN 771
                  YQL S+LGL KQ  NL+N+  QNP+L F  LLQ+  PPKYP   SPN  G    
Sbjct: 311  PLTSINYQLPSDLGLLKQPHNLLNLNVQNPILNFHPLLQA--PPKYPLPDSPNILGTTKP 368

Query: 770  SQGIL------SNTRMGTLDEFNMNHGQVRTHLNELPNFGTSDGMRND---------NNF 636
             QG L      S+ +M  L+EF +NHG V T+L+ L N  +S     D         +N 
Sbjct: 369  QQGSLEIPLNVSHLKMVVLEEFGLNHGHVNTNLSGLQNIVSSSSPSADVTLVRRSDHSNS 428

Query: 635  ASNCGDGVGSNDGD---------QGQARSFNENYGNS-QRANSCKLNFSGSSS-----HE 501
             +N GDG GSN+ D         QG  RS N +Y NS QR  + K+NF  SSS     H+
Sbjct: 429  LTNWGDGAGSNEVDHHHHQQQQQQGLLRSINGDYNNSTQRVTNGKVNFLASSSDFCGDHK 488

Query: 500  KGTENVTSRGGEGMVDSWICSSD 432
             G ENV +R  EG ++SWICSSD
Sbjct: 489  LGQENVATR-SEGTMESWICSSD 510


>ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|222853473|gb|EEE91020.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  214 bits (546), Expect = 6e-53
 Identities = 190/496 (38%), Positives = 233/496 (46%), Gaps = 75/496 (15%)
 Frame = -1

Query: 1706 DDEYDSRNESISAFLNPSSS--SHXXXXXXXXXXXXXXXXXXXXXXXXXP-TSLFDPLSN 1536
            D+EYDSR ESISAFLN +++  SH                           T LFDPLSN
Sbjct: 16   DEEYDSRAESISAFLNNNNNPLSHVGPMSSNPPPQPEHHHHHQTHHSSSSSTMLFDPLSN 75

Query: 1535 YFDVFXXXXXXXXXXXXXP----LNLDVVWSRNLRSEPNSTDMXXXXXXXXXXXXXXTHQ 1368
            YFD                    LNLD+VWS+NLRSEPN TD+              T+Q
Sbjct: 76   YFDPLSSASSRSPPPPFTNPNSLLNLDMVWSKNLRSEPNCTDLGGFISSSSPTQQLFTNQ 135

Query: 1367 DVNRVIIQTPPSSVSLPQGADTSVKASASSSDP----TNVXXXXXXXXXXXXXAPTTVLT 1200
               R   Q+ P     P G +++ +   S ++     T               APTTVLT
Sbjct: 136  TQTRTTFQSLP-----PHGHESATRGPVSGTNDQVSNTAGVRNPKKRSRASRRAPTTVLT 190

Query: 1199 TDTSNFRAMVQEFTGIXXXXXXXXXXXXXRLDLFST-ASTMRSG---HLEPNRPPPYLLR 1032
            TDT+NFRAMVQEFTGI             RLDLF T AST+RS    HL+P+ PPPYLLR
Sbjct: 191  TDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAASTLRSAVSHHLDPS-PPPYLLR 249

Query: 1031 PFAQK-------PSPFASS---------NMSPGIA---------XXXXXXXXXXXXXXXX 927
            PFAQ+         PFASS         +M   IA                         
Sbjct: 250  PFAQRFQPPPPPAPPFASSGSTASSFSTSMVDAIASTTTTNINNSGACTNSTTTSNISST 309

Query: 926  XXNYQLLSELGLSKQSQNL--VNMQNPLLTFQSLLQSTIPPKYPSPNSS---GFGDNSQG 762
              NYQL S+LGL KQ  +L  +N+QNP+L F  L Q+  P KYP PNS+   G     QG
Sbjct: 310  SINYQLPSDLGLLKQPHHLLNINVQNPILNFHPLFQA--PHKYPLPNSTNILGTTKAQQG 367

Query: 761  IL-------SNTRMGTLDEFNMNHGQVRTHLNELPNFGTSDG--------MR--NDNNFA 633
                     S+ +MG L+EF M+HG V T+L  L N  +S          MR  + NN  
Sbjct: 368  SSLEIPSNDSHLKMGVLEEFGMSHGHVSTNLTGLQNIVSSSSSPSADATLMRRGDHNNNL 427

Query: 632  SNCGDGVGSNDG-------DQGQARSFNENYGNS-QRANSCKLNFSGSSSHE-----KGT 492
            +N GDGVGSN+G        QG  RS N NY NS QR  + K+NF  SSS +     KG 
Sbjct: 428  ANWGDGVGSNEGGHHHHQQQQGLLRSINGNYNNSTQRVTNGKVNFLASSSSDFRGDNKGQ 487

Query: 491  ENVTSRGGEGMVDSWI 444
            ENV +R  E + D+ I
Sbjct: 488  ENVATRSEEVVNDNEI 503


>ref|XP_002534310.1| conserved hypothetical protein [Ricinus communis]
            gi|223525518|gb|EEF28072.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 498

 Score =  205 bits (521), Expect = 5e-50
 Identities = 181/488 (37%), Positives = 224/488 (45%), Gaps = 63/488 (12%)
 Frame = -1

Query: 1706 DDEYDSRNES-ISAFLNPSSSSHXXXXXXXXXXXXXXXXXXXXXXXXXPTSLFDPLSNYF 1530
            DDEYDSR ES ISAFLN S++++                           S+FDPLSNYF
Sbjct: 15   DDEYDSRAESSISAFLNHSNNNNPLTHVGPMPNPPPPPPDHHHHQHQTHHSMFDPLSNYF 74

Query: 1529 D-VFXXXXXXXXXXXXXPLNLDVVWSRNLRSEPNSTDMXXXXXXXXXXXXXXTHQDVN-- 1359
            D +               LNLD+VWS+NLRS+ N TD+                      
Sbjct: 75   DPLSSSRPPPPLTHPNSLLNLDMVWSKNLRSDTNCTDLGGFIATSSSPTQQFFTNQTQTG 134

Query: 1358 ---RVIIQTPP-SSVSLPQGADTSVKASASS------SDPTNVXXXXXXXXXXXXXAPTT 1209
                  IQ PP    + P     S  AS S+      +  TN+             APTT
Sbjct: 135  PTYNPSIQIPPVQETTAPSRGPGSASASGSNGHQTNNTTTTNIVRNPKKRSRASRRAPTT 194

Query: 1208 VLTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXRLDLFSTA--STMRS--GHLEPNRPPPY 1041
            VLTTDT+NFRAMVQEFTGI             RLDLF TA  S++RS   HLEP+ P  Y
Sbjct: 195  VLTTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAAASSLRSVVSHLEPSHPS-Y 253

Query: 1040 LLRPFAQKPSP-----FASSNMSPGIAXXXXXXXXXXXXXXXXXXNYQLL-SELGLSKQS 879
            LLRPFAQK  P      +SS+M   IA                        S+L L K  
Sbjct: 254  LLRPFAQKIQPPFLSSSSSSSMIDAIASSTTTSTNINSNATTNTTTNTTSNSDLSLLKYP 313

Query: 878  QNLVNMQ---NPLLTFQSLLQSTIPPKYPSPNSSGFGDNSQ-GILS------NTRMGTLD 729
            QNL+N+    +P+L F SL Q +  PKY  PNSS      Q G L       + +MG L+
Sbjct: 314  QNLLNINMHNSPMLNFHSLFQPS--PKYSLPNSSILATKPQEGSLDTPSNDPHLKMGVLE 371

Query: 728  EFNMNHGQVRTHLNELPNF-------------GTSDGMRNDNNFASNCGD-GVGSNDGDQ 591
            EF ++HG V T+L  L N               +S    N+NN + N GD  VGSN+GD 
Sbjct: 372  EFGLSHGHVSTNLTGLHNLVSSSDTTLRRSDHNSSSSSNNNNNNSGNWGDRRVGSNEGDH 431

Query: 590  GQARSFNENYGNSQR--------ANSCKLNFSGSSSH----EKGTEN---VTSRGGEGMV 456
               RS N NY N+          AN+ K+N+S SSS     +KG E    V +   EGMV
Sbjct: 432  -LLRSINGNYNNNNSSSNTQRVVANNGKVNYSASSSDFNHGDKGPETNVVVANTRSEGMV 490

Query: 455  DSWICSSD 432
            +SWICSSD
Sbjct: 491  ESWICSSD 498


Top