BLASTX nr result

ID: Coptis25_contig00007187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007187
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328885.1| predicted protein [Populus trichocarpa] gi|2...   496   e-138
ref|XP_002298617.1| predicted protein [Populus trichocarpa] gi|2...   494   e-137
ref|XP_003633787.1| PREDICTED: uridine kinase-like protein 1, ch...   494   e-137
ref|XP_004145639.1| PREDICTED: uridine kinase-like protein 2, ch...   490   e-136
ref|XP_002870669.1| ATUK/UPRT1 [Arabidopsis lyrata subsp. lyrata...   488   e-135

>ref|XP_002328885.1| predicted protein [Populus trichocarpa] gi|222839315|gb|EEE77652.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  496 bits (1278), Expect = e-138
 Identities = 247/316 (78%), Positives = 268/316 (84%)
 Frame = +3

Query: 111  LMETASGAHFSGLRLDSGKQLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKNRQPFV 290
            +ME ASG HFSGLRLD                                    +  +QPFV
Sbjct: 11   VMEKASGPHFSGLRLDG------------LLSSPPSSSTASPSHRSASASESNAPKQPFV 58

Query: 291  IGVCGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEEAEHVQEYNFDHPDAFDT 470
            IGV GGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEE++ V EYNFDHPDAFDT
Sbjct: 59   IGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEESKRVHEYNFDHPDAFDT 118

Query: 471  EQLLECVEKFKSGQTVQVPIYDFKNHRRCSETFRQVNASDVIILEGILIFHDQRVRNLMN 650
            EQLL+CV+K +SG + QVPIYDFK+HRRCS++FRQVNASDVIILEGIL+FHDQRVRNLMN
Sbjct: 119  EQLLDCVQKMRSGHSYQVPIYDFKSHRRCSDSFRQVNASDVIILEGILVFHDQRVRNLMN 178

Query: 651  MKIFVDTDADVRLSRRIRRDTVERSRDVNSVLEQYAKFVKPAFDDFILPSKKYADVIIPR 830
            MKIFVDTDADVRL+RRIRRDTVER RD+NSVLEQYAKFVKPAFDDF+LPSKKYADVIIPR
Sbjct: 179  MKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPR 238

Query: 831  GGDNHVAVDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDREITKHDFVFY 1010
            GGDNHVA+DLIVQHI TKLGQHDLCKIYPNV+VIQSTFQIRGMHTLIRD+EI+KHDFVFY
Sbjct: 239  GGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVHVIQSTFQIRGMHTLIRDKEISKHDFVFY 298

Query: 1011 SDRLIRLVVEHGLGHL 1058
            SDRLIRLV+EHGLGHL
Sbjct: 299  SDRLIRLVLEHGLGHL 314


>ref|XP_002298617.1| predicted protein [Populus trichocarpa] gi|222845875|gb|EEE83422.1|
            predicted protein [Populus trichocarpa]
          Length = 481

 Score =  494 bits (1273), Expect = e-137
 Identities = 249/318 (78%), Positives = 266/318 (83%), Gaps = 2/318 (0%)
 Frame = +3

Query: 111  LMETASGAHFSGLRLDSGKQLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKN--RQP 284
            +ME ASG HFSGLRLD                                    D N   QP
Sbjct: 11   VMEKASGPHFSGLRLDG----------LLSSPPSSTASPSHCSATASSSALSDSNAPNQP 60

Query: 285  FVIGVCGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEEAEHVQEYNFDHPDAF 464
            FVIGV GGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLT EE++ V EYNFDHPDAF
Sbjct: 61   FVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEESKRVHEYNFDHPDAF 120

Query: 465  DTEQLLECVEKFKSGQTVQVPIYDFKNHRRCSETFRQVNASDVIILEGILIFHDQRVRNL 644
            DTEQLL+C++K + GQ+ QVPIYDFKNHRR SE+FRQVNASDVIILEGIL+FHDQRVRNL
Sbjct: 121  DTEQLLDCIQKLRGGQSYQVPIYDFKNHRRSSESFRQVNASDVIILEGILVFHDQRVRNL 180

Query: 645  MNMKIFVDTDADVRLSRRIRRDTVERSRDVNSVLEQYAKFVKPAFDDFILPSKKYADVII 824
            MNMKIFVDTDADVRL+RRIRRDTVER RD+NSVLEQYAKFVKPAFDDF+LPSKKYADVII
Sbjct: 181  MNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVII 240

Query: 825  PRGGDNHVAVDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDREITKHDFV 1004
            PRGGDNHVA+DLIVQHI TKLGQHDLCKIYPNV+VIQSTFQIRGMHTLIRD+EI+KHDFV
Sbjct: 241  PRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVHVIQSTFQIRGMHTLIRDKEISKHDFV 300

Query: 1005 FYSDRLIRLVVEHGLGHL 1058
            FYSDRLIRLVVEHGLGHL
Sbjct: 301  FYSDRLIRLVVEHGLGHL 318


>ref|XP_003633787.1| PREDICTED: uridine kinase-like protein 1, chloroplastic-like isoform
            1 [Vitis vinifera]
          Length = 482

 Score =  494 bits (1272), Expect = e-137
 Identities = 249/316 (78%), Positives = 263/316 (83%)
 Frame = +3

Query: 111  LMETASGAHFSGLRLDSGKQLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKNRQPFV 290
            +ME ASG HFSGLRL+                                       +QPFV
Sbjct: 11   VMEAASGPHFSGLRLEG-------LLSSPPSATSSPSAAASATSSFSATLPDSAAKQPFV 63

Query: 291  IGVCGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEEAEHVQEYNFDHPDAFDT 470
            IGV GGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEE+E V EYNFDHPDAFDT
Sbjct: 64   IGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEESERVHEYNFDHPDAFDT 123

Query: 471  EQLLECVEKFKSGQTVQVPIYDFKNHRRCSETFRQVNASDVIILEGILIFHDQRVRNLMN 650
            EQLLEC+ K KSGQ+V VPIYDFKNHRRCS +FRQVN SDVIILEGIL+FHDQRVRNLMN
Sbjct: 124  EQLLECIGKLKSGQSVHVPIYDFKNHRRCSGSFRQVNVSDVIILEGILVFHDQRVRNLMN 183

Query: 651  MKIFVDTDADVRLSRRIRRDTVERSRDVNSVLEQYAKFVKPAFDDFILPSKKYADVIIPR 830
            MKIFVDTDADVRL+RRIRRDTVER RDVNSVLEQYAKFVKPAFDDF++PSKKYADVIIPR
Sbjct: 184  MKIFVDTDADVRLARRIRRDTVERGRDVNSVLEQYAKFVKPAFDDFVMPSKKYADVIIPR 243

Query: 831  GGDNHVAVDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDREITKHDFVFY 1010
            GGDNHVA+DLIVQHI TKLGQH+LCKIYPNV VIQSTFQIRGMHTLIRD EI+KHDFVFY
Sbjct: 244  GGDNHVAIDLIVQHIHTKLGQHNLCKIYPNVNVIQSTFQIRGMHTLIRDHEISKHDFVFY 303

Query: 1011 SDRLIRLVVEHGLGHL 1058
            SDRLIRLVVEHGLGHL
Sbjct: 304  SDRLIRLVVEHGLGHL 319


>ref|XP_004145639.1| PREDICTED: uridine kinase-like protein 2, chloroplastic-like [Cucumis
            sativus]
          Length = 482

 Score =  490 bits (1261), Expect = e-136
 Identities = 246/316 (77%), Positives = 262/316 (82%)
 Frame = +3

Query: 111  LMETASGAHFSGLRLDSGKQLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKNRQPFV 290
            +ME ASG HFSGLRLD                                    +  RQPFV
Sbjct: 11   VMEAASGPHFSGLRLDG-------RLASPPSSSTSSPAHRSSFLSSFAQADTNSPRQPFV 63

Query: 291  IGVCGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEEAEHVQEYNFDHPDAFDT 470
            IGV GGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEE E V EYNFDHPD+FDT
Sbjct: 64   IGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEELERVHEYNFDHPDSFDT 123

Query: 471  EQLLECVEKFKSGQTVQVPIYDFKNHRRCSETFRQVNASDVIILEGILIFHDQRVRNLMN 650
            EQL++C+EK KSGQ   VPIYDFK H+RC ++FRQVNAS+VIILEGIL+FHDQRVRNLMN
Sbjct: 124  EQLVDCIEKLKSGQPYHVPIYDFKTHQRCVDSFRQVNASNVIILEGILVFHDQRVRNLMN 183

Query: 651  MKIFVDTDADVRLSRRIRRDTVERSRDVNSVLEQYAKFVKPAFDDFILPSKKYADVIIPR 830
            MKIFVDTD DVRL+RRIRRDTVER RD+NSVLEQYAKFVKPAFDDFILPSKKYADVIIPR
Sbjct: 184  MKIFVDTDPDVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFILPSKKYADVIIPR 243

Query: 831  GGDNHVAVDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDREITKHDFVFY 1010
            GGDNHVA+DLIVQHI TKLGQHDLCKIYPNV VIQSTFQIRGMHTLIRDR+I+KHDFVFY
Sbjct: 244  GGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVTVIQSTFQIRGMHTLIRDRDISKHDFVFY 303

Query: 1011 SDRLIRLVVEHGLGHL 1058
            SDRLIRLVVEHGLGHL
Sbjct: 304  SDRLIRLVVEHGLGHL 319


>ref|XP_002870669.1| ATUK/UPRT1 [Arabidopsis lyrata subsp. lyrata]
            gi|297316505|gb|EFH46928.1| ATUK/UPRT1 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 489

 Score =  488 bits (1256), Expect = e-135
 Identities = 246/315 (78%), Positives = 260/315 (82%)
 Frame = +3

Query: 114  METASGAHFSGLRLDSGKQLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKNRQPFVI 293
            ME ASG HFSGLR D    L+                              D  +QPF+I
Sbjct: 12   MEKASGPHFSGLRFDG---LLSSSPPNSSVVSSLSHLRSAVSSSSPASSDPDAPKQPFII 68

Query: 294  GVCGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEEAEHVQEYNFDHPDAFDTE 473
            GV GGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLT+EE + VQEYNFDHPDAFDTE
Sbjct: 69   GVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTSEELQRVQEYNFDHPDAFDTE 128

Query: 474  QLLECVEKFKSGQTVQVPIYDFKNHRRCSETFRQVNASDVIILEGILIFHDQRVRNLMNM 653
            QLL C    KSGQ  QVPIYDFK H+R S+TFRQVNASDVIILEGIL+FHD RVRNLMNM
Sbjct: 129  QLLHCAVTLKSGQPYQVPIYDFKTHQRRSDTFRQVNASDVIILEGILVFHDSRVRNLMNM 188

Query: 654  KIFVDTDADVRLSRRIRRDTVERSRDVNSVLEQYAKFVKPAFDDFILPSKKYADVIIPRG 833
            KIFVDTDADVRL+RRIRRDTVER RDVNSVLEQYAKFVKPAFDDF+LPSKKYADVIIPRG
Sbjct: 189  KIFVDTDADVRLARRIRRDTVERGRDVNSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRG 248

Query: 834  GDNHVAVDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDREITKHDFVFYS 1013
            GDNHVAVDLI QHI TKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIR+++I+KHDFVFYS
Sbjct: 249  GDNHVAVDLITQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIREKDISKHDFVFYS 308

Query: 1014 DRLIRLVVEHGLGHL 1058
            DRLIRLVVEHGLGHL
Sbjct: 309  DRLIRLVVEHGLGHL 323


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