BLASTX nr result

ID: Coptis25_contig00007172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007172
         (1393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25038.3| unnamed protein product [Vitis vinifera]              252   2e-64
ref|XP_002306794.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-57
ref|XP_004145394.1| PREDICTED: protein TIFY 4B-like [Cucumis sat...   227   5e-57
ref|XP_002517073.1| conserved hypothetical protein [Ricinus comm...   210   6e-52
ref|XP_003555350.1| PREDICTED: protein TIFY 4B-like [Glycine max]     205   3e-50

>emb|CBI25038.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  252 bits (643), Expect = 2e-64
 Identities = 157/346 (45%), Positives = 200/346 (57%), Gaps = 29/346 (8%)
 Frame = -3

Query: 1217 MKPDETVTKSPLDKPLFQLTEDDISQLTREDCRRYLINKGMRRPSWNKSQAIEQVISLKT 1038
            M P+    +S LDKPL QLTEDDISQLTREDCR+YL  KGMRRPSWNKSQAI+QVISLKT
Sbjct: 1    MSPENANIRSLLDKPLHQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKT 60

Query: 1037 LLEPKPEFHTTTDI-------PKKVVFSHP-------------VARNENVSCREKEFPKP 918
            LLE      TT+D         +K +F  P             V+  E+V  + ++ PKP
Sbjct: 61   LLE------TTSDCGGGDAAGARKKLFVPPPENQHRVPLTRISVSDEESVPYQRQDPPKP 114

Query: 917  DTSTDVPVQV-----PDXXXXXXXXXXXRLAGQMTIFYCGKVNVYDVIPAEKALAVMQLA 753
            D S D    +      D             AGQMTIFYCGKVNVYD +  +KA A+MQLA
Sbjct: 115  DISGDTEAHLLAAADSDSIPPRTLDAMNGPAGQMTIFYCGKVNVYDDVSMDKAKAIMQLA 174

Query: 752  ASNVHVPQDSPPAGTASSQSFACQLQAACIRSGLAFPSTASASLHNV-VAENSQHYKEDV 576
            AS++H+ Q++P  GT     F+C L+AA ++ G + P+    +L  V + EN Q ++E+ 
Sbjct: 175  ASSLHLHQEAPCDGTPELLPFSCHLRAASVKIGPSSPTVIYPTLQTVKMTENCQLHREES 234

Query: 575  TLCRE---VEPEGPISRKASVQRYLEKRKDRGRLKNKRKIGVSTSLEMYLNHQVRDQYPN 405
             + RE      E P SRKASVQRYLEKRKDR + K +  +  S  L++YLNH+V DQ PN
Sbjct: 235  NIFREDNHPAAEVPTSRKASVQRYLEKRKDRFKSKKRGGMPSSAGLDIYLNHRVGDQIPN 294

Query: 404  EQSSQSRACXXXXXXXXXXXXXSNSVENQAKNFVFPIDLNENDDQE 267
            +QS+QS AC              + VEN  K+     DLN  D QE
Sbjct: 295  DQSNQSDACSLSHCRAHHIPTPCSLVENMTKHTNLSADLNIKDVQE 340


>ref|XP_002306794.1| predicted protein [Populus trichocarpa] gi|222856243|gb|EEE93790.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  229 bits (583), Expect = 2e-57
 Identities = 152/364 (41%), Positives = 194/364 (53%), Gaps = 46/364 (12%)
 Frame = -3

Query: 1217 MKPDETVTKSPLDKPLFQLTEDDISQLTREDCRRYLINKGMRRPSWNKSQAIEQVISLKT 1038
            M+P ETV +S LDKPL QLTEDDISQ+TREDCRRYL  KGMRRPSWNKSQAI+QVISLKT
Sbjct: 1    MQPGETVFRSALDKPLHQLTEDDISQVTREDCRRYLKEKGMRRPSWNKSQAIQQVISLKT 60

Query: 1037 LLEPKPEFHTTTDIPKKVVF-----SHP------------------------------VA 963
            LLE  PE    T+ P++ ++      HP                              V 
Sbjct: 61   LLEATPE----TESPRRRLYIPRPPPHPPDNTPRVRFSAVPPNSSVSERGASAETPISVP 116

Query: 962  RNENVSCREKEFPKPDTSTD--VPVQVPDXXXXXXXXXXXRL----AGQMTIFYCGKVNV 801
              E V CR+ + P PD   D   PV                +    AGQMTIFYCGKVNV
Sbjct: 117  AEEPVPCRQHDPPNPDDPADPLPPVHAAVTENASVSPRTTGMAEESAGQMTIFYCGKVNV 176

Query: 800  YDVIPAEKALAVMQLAASNVHVPQDSPPAGTASSQSFACQLQAACIRSGLAFPSTASASL 621
            YD +P +KA A+M LAAS    PQD+      + +   CQL    ++   A P++  A+ 
Sbjct: 177  YDDVPGDKAQAIMHLAASPFAPPQDASSDVIPTLRPLQCQLDTPGVK---AAPNSIVANF 233

Query: 620  HNVV----AENSQHYKEDVTLCREVEPEGPISRKASVQRYLEKRKDRGRLKNKRKIGV-S 456
              +     A++ Q   E+  + RE   EG  SRKAS+QRY EK+KD  R KNKRK+ V S
Sbjct: 234  PTLPTVKGADSGQLLWEESNIAREDNLEGSTSRKASLQRYFEKKKD--RFKNKRKVAVPS 291

Query: 455  TSLEMYLNHQVRDQYPNEQSSQSRACXXXXXXXXXXXXXSNSVENQAKNFVFPIDLNEND 276
             SL+++L+H V DQ  N+  + + AC              NSV+N AKN +   DLN   
Sbjct: 292  ASLDVFLSHLVGDQISNDHWNLNDACSPSQPRPPQTPNRCNSVDNVAKNGILKADLNNKG 351

Query: 275  DQEV 264
            D ++
Sbjct: 352  DADL 355


>ref|XP_004145394.1| PREDICTED: protein TIFY 4B-like [Cucumis sativus]
            gi|449494857|ref|XP_004159666.1| PREDICTED: protein TIFY
            4B-like [Cucumis sativus]
          Length = 336

 Score =  227 bits (579), Expect = 5e-57
 Identities = 148/333 (44%), Positives = 184/333 (55%), Gaps = 24/333 (7%)
 Frame = -3

Query: 1193 KSPLDKPLFQLTEDDISQLTREDCRRYLINKGMRRPSWNKSQAIEQVISLKTLLEPKPEF 1014
            +S LDKPL QLTEDDISQLTREDCR+YL  KGMRRPSWNKSQAI+QVISLK LLEP  + 
Sbjct: 9    RSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLEPCDD- 67

Query: 1013 HTTTDIPKKVVFSHPVARNE-------------NVSCREKEFPKPDTSTDVPVQVP---- 885
             +     +KVV S  +  N+              +S  E  +   +T+   P   P    
Sbjct: 68   -SGAGALRKVVVSPRINSNQGDSPKEPSDDAQVTMSVDESAYSNVETAKSTPEDPPVEPE 126

Query: 884  -DXXXXXXXXXXXRLAGQMTIFYCGKVNVYDVIPAEKALAVMQLAASNVHVPQDSPPAGT 708
             +            + GQMTIFYCGKVNVYD +P +KA A+M LAAS +H PQ+ P +GT
Sbjct: 127  NNVTSPRDQYDTNGVDGQMTIFYCGKVNVYDGVPPDKAWAIMHLAASPIHFPQNHPMSGT 186

Query: 707  ASSQSFACQLQAACIRSGLAFPS-TASASLHNVV----AENSQHYKEDVTLCREVEPEGP 543
            A+ QS  C LQ +  R     PS T   ++H        +  QH K   T  R+ + EG 
Sbjct: 187  AACQSPPCLLQTSSDRDDFLPPSATIYRNVHTEKLGEHPQQQQHAKG--TSMRDSDVEGQ 244

Query: 542  ISRKASVQRYLEKRKDRGRLKNKRKIGVST-SLEMYLNHQVRDQYPNEQSSQSRACXXXX 366
             SRK S+QRYLEKRKDRGRLKNK+  G+S+ SLE Y+NHQ+R    N+   Q        
Sbjct: 245  ASRKVSLQRYLEKRKDRGRLKNKKNTGLSSPSLEGYMNHQMRTHISNKNLGQ--IVTSSL 302

Query: 365  XXXXXXXXXSNSVENQAKNFVFPIDLNENDDQE 267
                         +NQ K   F +DLN  D QE
Sbjct: 303  SPTGVAKAFVGPADNQPKLACFSVDLNVKDIQE 335


>ref|XP_002517073.1| conserved hypothetical protein [Ricinus communis]
            gi|223543708|gb|EEF45236.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 335

 Score =  210 bits (535), Expect = 6e-52
 Identities = 143/332 (43%), Positives = 181/332 (54%), Gaps = 24/332 (7%)
 Frame = -3

Query: 1202 TVTKSPLDKPLFQLTEDDISQLTREDCRRYLINKGMRRPSWNKSQAIEQVISLKTLLEPK 1023
            T  +S LDKPL QLTE+DISQLTREDCR+YL  KGMRRPSWNKSQAI+QVISLK LLE  
Sbjct: 6    TSFRSILDKPLTQLTEEDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLETS 65

Query: 1022 PEFHTTTDIPKKVVFSHPVARNENVSCRE------------------KEFPKPDTSTDVP 897
             E      + + +V   PV  N   S +E                   + P P  S D P
Sbjct: 66   -EDSGAGALRRILVSKPPVTSNSVDSAKEPSDSNNNNLLDETAPHDSPKSPPPAPSLDCP 124

Query: 896  VQVPD--XXXXXXXXXXXRLAGQMTIFYCGKVNVYDVIPAEKALAVMQLAASNVHVPQDS 723
            ++  D              L GQMTIFYCGKVNVYD +P +KA A+M LAA+ +H P D 
Sbjct: 125  LEEADNKVISSRSPGATDGLVGQMTIFYCGKVNVYDGVPPDKAQAIMHLAATPIHSPLDD 184

Query: 722  PPAGTASSQSFACQLQAACIRSGLAFPSTASAS---LHNVVAENSQHYKEDVTLCREVEP 552
            P        +F   LQ    +  +  PS A+ S       V E SQ  +E   +  + + 
Sbjct: 185  PIRRPVF--AFPYHLQTPSDKH-VFVPSNAAISPTTPTEKVTEYSQQCREKGNVTYDHDV 241

Query: 551  EGPISRKASVQRYLEKRKDRGRLKNKRKIGV-STSLEMYLNHQVRDQYPNEQSSQSRACX 375
            EG  +RK S+QRYLEK+KDRGR K ++ +G  S+SL+ YLNHQ+R    NEQS  +R+  
Sbjct: 242  EGQANRKMSLQRYLEKKKDRGRFKGRKNLGPNSSSLDAYLNHQMRTHISNEQS--TRSST 299

Query: 374  XXXXXXXXXXXXSNSVENQAKNFVFPIDLNEN 279
                        SNS E+Q K   F +DLNE+
Sbjct: 300  SSPTQPGVPHTSSNSAEDQLKTASFAVDLNED 331


>ref|XP_003555350.1| PREDICTED: protein TIFY 4B-like [Glycine max]
          Length = 413

 Score =  205 bits (521), Expect = 3e-50
 Identities = 141/341 (41%), Positives = 176/341 (51%), Gaps = 32/341 (9%)
 Frame = -3

Query: 1193 KSPLDKPLFQLTEDDISQLTREDCRRYLINKGMRRPSWNKSQAIEQVISLKTLLEPKPEF 1014
            +S LDKPL QLTEDDISQLTREDCRR+L  KGMRRPSWNKSQAI+QVISLK LLEP  + 
Sbjct: 83   RSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSDD- 141

Query: 1013 HTTTDIPKKVVFSH-------PVARNENVSCRE------------------KEFPKPDTS 909
                D P      H       P      V+  E                  ++  KP +S
Sbjct: 142  ----DTPPPTAMHHRSHAPPPPPQPQSQVNLTEPPPPPKAPPPEESSFHAAEDIQKPASS 197

Query: 908  TDVPVQVPDXXXXXXXXXXXRLA---GQMTIFYCGKVNVYDVIPAEKALAVMQLAASNVH 738
             + P +  D             +   GQMTIFYCGKVNVYD +  +KA A+MQLA S V 
Sbjct: 198  GEKPSETNDTNTNVASPKGCATSGSFGQMTIFYCGKVNVYDGVSPDKARAIMQLAVSPVQ 257

Query: 737  VPQDSPPAGTASSQSFACQLQAACIRSGLAFP---STASASLHNVVAENSQHYKEDVTLC 567
              QD P  G A+     C L    +   +  P   +    +  + + E    Y+E  ++ 
Sbjct: 258  FTQDDPSNGNAAVWPSPCHLP---MDKDVLIPVDTTILQVAQSDKMMEYPLQYREKGSIA 314

Query: 566  REVEPEGPISRKASVQRYLEKRKDRGRLKNKRKIGV-STSLEMYLNHQVRDQYPNEQSSQ 390
            R+ + EG  SRK S+QRYLEKRKDRGRLK K+  G+ S++ EMYLN  V+    N  S  
Sbjct: 315  RDADVEGQASRKVSLQRYLEKRKDRGRLKGKKLTGITSSNFEMYLNLPVKVHASNGNS-- 372

Query: 389  SRACXXXXXXXXXXXXXSNSVENQAKNFVFPIDLNENDDQE 267
            SR+              S S +NQ K    PIDLN+ D QE
Sbjct: 373  SRSSTSSPPQPRLPLVSSGSADNQLK-VALPIDLNDKDVQE 412


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