BLASTX nr result

ID: Coptis25_contig00007170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007170
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518858.1| hypothetical protein RCOM_1312210 [Ricinus c...    85   5e-15
emb|CBI34537.3| unnamed protein product [Vitis vinifera]               74   2e-11
dbj|BAD23410.1| hypothetical protein [Oryza sativa Japonica Grou...    73   3e-11
ref|XP_002304329.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
gb|EEE69564.1| hypothetical protein OsJ_29073 [Oryza sativa Japo...    73   3e-11

>ref|XP_002518858.1| hypothetical protein RCOM_1312210 [Ricinus communis]
           gi|223541845|gb|EEF43391.1| hypothetical protein
           RCOM_1312210 [Ricinus communis]
          Length = 520

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/73 (60%), Positives = 56/73 (76%)
 Frame = -3

Query: 222 YTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELTA 43
           YT+Q TQKAKKFH+G+LRL+     R QVTLL++D TILSSK+L  SEDV+SGST  L  
Sbjct: 260 YTSQITQKAKKFHNGILRLTTSGSCRMQVTLLNEDKTILSSKFLNLSEDVRSGSTFVLPK 319

Query: 42  HLVEIGEERTYQE 4
           +LVE+GE  + +E
Sbjct: 320 YLVEVGEPHSPRE 332



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/67 (44%), Positives = 43/67 (64%)
 Frame = -3

Query: 222 YTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELTA 43
           YTTQ TQKAKK+HDG LRL+      +Q+ L  +   +L S++L   E ++S  ++   A
Sbjct: 146 YTTQITQKAKKYHDGFLRLTSSGSFGRQIMLYDERREVLDSRFLTKDEVLRSHESITFNA 205

Query: 42  HLVEIGE 22
           HLV+IGE
Sbjct: 206 HLVDIGE 212


>emb|CBI34537.3| unnamed protein product [Vitis vinifera]
          Length = 148

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/67 (52%), Positives = 47/67 (70%)
 Frame = -3

Query: 222 YTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELTA 43
           YTTQ TQKAKK+HDG LRLS+G  Q +QV L      +L S++LK  E ++SG ++   A
Sbjct: 39  YTTQITQKAKKYHDGFLRLSIGGSQGRQVMLYDASKKLLDSRFLKKDEVIRSGESLTFDA 98

Query: 42  HLVEIGE 22
           HLV++GE
Sbjct: 99  HLVDVGE 105


>dbj|BAD23410.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|50726192|dbj|BAD33711.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 682

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/69 (52%), Positives = 48/69 (69%)
 Frame = -3

Query: 222 YTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELTA 43
           YTTQ TQKAKK+HDGV++L       KQ+ LL +DG +L S+YLKS E V+SG   +L  
Sbjct: 270 YTTQLTQKAKKYHDGVIKLVQVGSHAKQIVLLDEDGGVLGSRYLKSGESVESGMKYQLPN 329

Query: 42  HLVEIGEER 16
           +L+E+ E R
Sbjct: 330 YLIEVCEIR 338



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/70 (47%), Positives = 49/70 (70%)
 Frame = -3

Query: 222 YTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELTA 43
           YTTQ TQKAKKFHDGV+RL+      KQ+ LL ++G +L+++YLKS E +++G       
Sbjct: 151 YTTQLTQKAKKFHDGVVRLAQVSSHAKQIILLDEEGGVLATRYLKSGESLETGKKCHFPN 210

Query: 42  HLVEIGEERT 13
           +L+EI E ++
Sbjct: 211 YLIEICEAKS 220


>ref|XP_002304329.1| predicted protein [Populus trichocarpa] gi|222841761|gb|EEE79308.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/67 (56%), Positives = 48/67 (71%)
 Frame = -3

Query: 222 YTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELTA 43
           YT+  TQKAKK+H G+LRL+     R QVTLLS+  T L+SK+L  SEDVK GS + L  
Sbjct: 297 YTSHITQKAKKYHSGILRLASCGSYRMQVTLLSEGKTFLTSKFLSLSEDVKVGSKLALPK 356

Query: 42  HLVEIGE 22
           +LVE+GE
Sbjct: 357 YLVEVGE 363



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/67 (44%), Positives = 39/67 (58%)
 Frame = -3

Query: 222 YTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELTA 43
           YTTQ TQK KK+HDG LRL+       Q+ L       L  ++LK  E + SG ++   A
Sbjct: 183 YTTQMTQKTKKYHDGFLRLASRESLGTQIMLYDASKRQLDCRFLKKDEIISSGESISFDA 242

Query: 42  HLVEIGE 22
           HLV+IGE
Sbjct: 243 HLVDIGE 249


>gb|EEE69564.1| hypothetical protein OsJ_29073 [Oryza sativa Japonica Group]
          Length = 798

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/69 (52%), Positives = 48/69 (69%)
 Frame = -3

Query: 222 YTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELTA 43
           YTTQ TQKAKK+HDGV++L       KQ+ LL +DG +L S+YLKS E V+SG   +L  
Sbjct: 326 YTTQLTQKAKKYHDGVIKLVQVGSHAKQIVLLDEDGGVLGSRYLKSGESVESGMKYQLPN 385

Query: 42  HLVEIGEER 16
           +L+E+ E R
Sbjct: 386 YLIEVCEIR 394



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/70 (47%), Positives = 49/70 (70%)
 Frame = -3

Query: 222 YTTQKTQKAKKFHDGVLRLSVGVWQRKQVTLLSDDGTILSSKYLKSSEDVKSGSTMELTA 43
           YTTQ TQKAKKFHDGV+RL+      KQ+ LL ++G +L+++YLKS E +++G       
Sbjct: 151 YTTQLTQKAKKFHDGVVRLAQVSSHAKQIILLDEEGGVLATRYLKSGESLETGKKCHFPN 210

Query: 42  HLVEIGEERT 13
           +L+EI E ++
Sbjct: 211 YLIEICEAKS 220


Top