BLASTX nr result

ID: Coptis25_contig00007169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007169
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540124.1| PREDICTED: ATPase family AAA domain-containi...    56   3e-06
ref|XP_003538930.1| PREDICTED: ATPase family AAA domain-containi...    56   3e-06
ref|NP_001047821.1| Os02g0697600 [Oryza sativa Japonica Group] g...    54   1e-05
gb|EAY87170.1| hypothetical protein OsI_08571 [Oryza sativa Indi...    54   1e-05

>ref|XP_003540124.1| PREDICTED: ATPase family AAA domain-containing protein 3-B-like
           [Glycine max]
          Length = 617

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 22/37 (59%), Positives = 32/37 (86%)
 Frame = +3

Query: 372 PRVRNDYPRTSASGFDPSALERGVKLIEKLEKNPNNK 482
           P+VRND+PRT+++GFDP ALERGVK + ++ K+P+ K
Sbjct: 46  PKVRNDHPRTTSAGFDPEALERGVKALREISKSPHGK 82


>ref|XP_003538930.1| PREDICTED: ATPase family AAA domain-containing protein 3-B-like
           [Glycine max]
          Length = 620

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 22/37 (59%), Positives = 32/37 (86%)
 Frame = +3

Query: 372 PRVRNDYPRTSASGFDPSALERGVKLIEKLEKNPNNK 482
           P+VRND+PRT+++GFDP ALERGVK + ++ K+P+ K
Sbjct: 49  PKVRNDHPRTTSAGFDPEALERGVKALREISKSPHGK 85


>ref|NP_001047821.1| Os02g0697600 [Oryza sativa Japonica Group]
           gi|41052952|dbj|BAD07862.1| 26S proteosome regulatory
           subunit-like [Oryza sativa Japonica Group]
           gi|113537352|dbj|BAF09735.1| Os02g0697600 [Oryza sativa
           Japonica Group] gi|125583347|gb|EAZ24278.1| hypothetical
           protein OsJ_08029 [Oryza sativa Japonica Group]
           gi|215768413|dbj|BAH00642.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 640

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 22/38 (57%), Positives = 32/38 (84%)
 Frame = +3

Query: 369 KPRVRNDYPRTSASGFDPSALERGVKLIEKLEKNPNNK 482
           K +VRND+PRTSA+GFDP ALERG  +++++E +P+ K
Sbjct: 67  KRKVRNDHPRTSAAGFDPEALERGAAMLKQIENSPHGK 104


>gb|EAY87170.1| hypothetical protein OsI_08571 [Oryza sativa Indica Group]
          Length = 640

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 22/38 (57%), Positives = 32/38 (84%)
 Frame = +3

Query: 369 KPRVRNDYPRTSASGFDPSALERGVKLIEKLEKNPNNK 482
           K +VRND+PRTSA+GFDP ALERG  +++++E +P+ K
Sbjct: 67  KRKVRNDHPRTSAAGFDPEALERGAAMLKQIENSPHGK 104


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