BLASTX nr result

ID: Coptis25_contig00007164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007164
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR ...   184   8e-45
ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
ref|XP_002328132.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, put...   171   6e-41
ref|XP_002446940.1| hypothetical protein SORBIDRAFT_06g025430 [S...   169   2e-40

>ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR region-like [Vitis
           vinifera] gi|297744476|emb|CBI37738.3| unnamed protein
           product [Vitis vinifera]
          Length = 272

 Score =  184 bits (466), Expect = 8e-45
 Identities = 86/126 (68%), Positives = 108/126 (85%), Gaps = 1/126 (0%)
 Frame = +2

Query: 2   GGEVLGGRDEVAGGTWLACTRHGRLAFLTNVAELSQLPEAKSRGNLPLQFLQGWMSPMEF 181
           GGE+LGGRD +AGGTWLAC+R GRLAFLTNV E+  +PEAKSRG+L ++FL+   +PMEF
Sbjct: 38  GGEILGGRDGLAGGTWLACSRDGRLAFLTNVREVHPIPEAKSRGDLIVRFLESKKNPMEF 97

Query: 182 AKEVLKDADQYNGFNLVLSDLCSKTMVYVTNRPK-GEASVQKVSTGIHVLSNAQLDTPWQ 358
           A+EV+K+AD+YNGFNL+++DLCSKTM+Y+TNRP+    SV +VS GIHVLSNA LD+PW 
Sbjct: 98  AEEVMKEADKYNGFNLIIADLCSKTMIYITNRPREANVSVVEVSPGIHVLSNASLDSPWP 157

Query: 359 KAERLG 376
           KA RLG
Sbjct: 158 KARRLG 163


>ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|222856428|gb|EEE93975.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  174 bits (442), Expect = 5e-42
 Identities = 82/126 (65%), Positives = 104/126 (82%), Gaps = 1/126 (0%)
 Frame = +2

Query: 2   GGEVLGGRDEVAGGTWLACTRHGRLAFLTNVAELSQLPEAKSRGNLPLQFLQGWMSPMEF 181
           G E+LGGRD VAGGTWLAC+R GR+AF+TNV EL   PEAKSRG LP+ FL+   SP EF
Sbjct: 34  GSEILGGRDAVAGGTWLACSRTGRVAFITNVLELHPFPEAKSRGELPVLFLESTKSPKEF 93

Query: 182 AKEVLKDADQYNGFNLVLSDLCSKTMVYVTNRPKGE-ASVQKVSTGIHVLSNAQLDTPWQ 358
           A+ ++KDA QYNGFNL+L+D+ SK+MVY++NRP+GE   +Q+VS G+HVLSNA+LD+PW 
Sbjct: 94  AEGLVKDAHQYNGFNLILADISSKSMVYLSNRPEGEPVVIQEVSPGLHVLSNAKLDSPWH 153

Query: 359 KAERLG 376
           K +RLG
Sbjct: 154 KVQRLG 159


>ref|XP_002328132.1| predicted protein [Populus trichocarpa] gi|222837647|gb|EEE76012.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  172 bits (435), Expect = 3e-41
 Identities = 79/126 (62%), Positives = 106/126 (84%), Gaps = 1/126 (0%)
 Frame = +2

Query: 2   GGEVLGGRDEVAGGTWLACTRHGRLAFLTNVAELSQLPEAKSRGNLPLQFLQGWMSPMEF 181
           GGE+LGG+DE+AGGTWL CTR G++AF+TNV E+  +P+AKSRG+L L+FL+   +P E+
Sbjct: 38  GGEILGGKDELAGGTWLGCTRDGKIAFITNVREVKSIPQAKSRGDLTLRFLESNKNPKEY 97

Query: 182 AKEVLKDADQYNGFNLVLSDLCSKTMVYVTNRPKGE-ASVQKVSTGIHVLSNAQLDTPWQ 358
           A+E+ K+ADQYNGFNL+L+D+ SK+MVY+TNRPK E   V +V+ G+HVLSNA LD+PW 
Sbjct: 98  AEELSKEADQYNGFNLILADISSKSMVYLTNRPKPENFIVMEVTPGMHVLSNASLDSPWP 157

Query: 359 KAERLG 376
           KA+RLG
Sbjct: 158 KAQRLG 163


>ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, putative [Ricinus
           communis] gi|223551385|gb|EEF52871.1| Ser/Thr-rich
           protein T10 in DGCR region, putative [Ricinus communis]
          Length = 248

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/125 (66%), Positives = 103/125 (82%), Gaps = 1/125 (0%)
 Frame = +2

Query: 2   GGEVLGGRDEVAGGTWLACTRHGRLAFLTNVAELSQLPEAKSRGNLPLQFLQGWMSPMEF 181
           G +VLGGRD VAGGTWL C+R GR+AFLTNV EL  LPEA+SRG LP+ FL+   SP EF
Sbjct: 17  GCDVLGGRDAVAGGTWLGCSRSGRVAFLTNVLELHALPEARSRGELPVLFLESPKSPKEF 76

Query: 182 AKEVLKDADQYNGFNLVLSDLCSKTMVYVTNRPKGE-ASVQKVSTGIHVLSNAQLDTPWQ 358
           A+ ++K+A QYNGFNL+L+D+ SK+MVY++NRPKGE   VQ+VS GIHVLSNA+LD+PW 
Sbjct: 77  AEMLVKEAHQYNGFNLILADISSKSMVYISNRPKGEPVVVQEVSPGIHVLSNAKLDSPWP 136

Query: 359 KAERL 373
           K +RL
Sbjct: 137 KVQRL 141


>ref|XP_002446940.1| hypothetical protein SORBIDRAFT_06g025430 [Sorghum bicolor]
           gi|241938123|gb|EES11268.1| hypothetical protein
           SORBIDRAFT_06g025430 [Sorghum bicolor]
          Length = 270

 Score =  169 bits (429), Expect = 2e-40
 Identities = 78/126 (61%), Positives = 101/126 (80%)
 Frame = +2

Query: 2   GGEVLGGRDEVAGGTWLACTRHGRLAFLTNVAELSQLPEAKSRGNLPLQFLQGWMSPMEF 181
           G E+LGGRDE+ GGTW+ CTR G+LAFLTNV E S L  AK+RG LP++FLQG   P+E+
Sbjct: 42  GKEILGGRDELGGGTWMGCTRDGKLAFLTNVREPSSLIGAKTRGQLPVRFLQGSHGPLEY 101

Query: 182 AKEVLKDADQYNGFNLVLSDLCSKTMVYVTNRPKGEASVQKVSTGIHVLSNAQLDTPWQK 361
           A E+ K+ADQYNGFNL+L+D+ S TMVY++NRP G+  +Q V+ G+HVLSNA +D+PW K
Sbjct: 102 ATEIAKEADQYNGFNLILADVNSGTMVYISNRPGGDPVIQTVAPGLHVLSNAAIDSPWPK 161

Query: 362 AERLGR 379
           A RLG+
Sbjct: 162 AMRLGQ 167


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