BLASTX nr result

ID: Coptis25_contig00007161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007161
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311767.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
ref|XP_002333719.1| predicted protein [Populus trichocarpa] gi|2...   372   e-101
gb|ABR16195.1| unknown [Picea sitchensis]                             371   e-100
ref|XP_003551225.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   370   e-100
ref|XP_003530631.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   367   2e-99

>ref|XP_002311767.1| predicted protein [Populus trichocarpa] gi|222851587|gb|EEE89134.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  374 bits (960), Expect = e-101
 Identities = 174/289 (60%), Positives = 223/289 (77%)
 Frame = +3

Query: 108 LISSSQSFAKDLWAETKLIWYIAGPAILTSICQYSLATVTQTLLGHVGTYELAAFGMENL 287
           LI+S + F+++ + E+K +WY+AGPAI T++CQYSL  +TQ L GHVGT +LAA  +EN 
Sbjct: 5   LINSVRDFSREFFRESKKLWYLAGPAIFTTLCQYSLGAITQLLAGHVGTLDLAAVSVENS 64

Query: 288 FVAGIGFGIMLGMGSALETLCGQAYGAGKLDMMGIYMQRSWIILFSAGVLLSLVYVFAGQ 467
            +AG  FGIMLGMGSALETLCGQAYGAG+LDM+G+YMQRSW+IL +  V+L+L+Y+FAG 
Sbjct: 65  VIAGFSFGIMLGMGSALETLCGQAYGAGQLDMLGLYMQRSWVILNATAVILTLLYIFAGP 124

Query: 468 ILRLLGQSPEIADLAGKFSIWMIPQLFAYALNFPIQKFLQAQSKVMVMAWISVAALVLHG 647
            L+L+GQ+ EI+  AG FS+WMIPQLFAYA+NFPI KFLQAQSK+M MA I+  A+V H 
Sbjct: 125 FLKLIGQTAEISQAAGMFSVWMIPQLFAYAMNFPIAKFLQAQSKMMAMAAIAAVAIVFHA 184

Query: 648 ILSWVFIIKLEMGLVGAAITLNFSWWVMVLAQLIYILSGACKEAWSGFSWLAFAELPGFI 827
           + SW+ ++KL  GLVGAA+ LN SWW +V+AQL+YI SG C EAW+G SW AF  L GF+
Sbjct: 185 VFSWLLMLKLGWGLVGAAVVLNASWWFIVIAQLLYIFSGTCGEAWTGLSWKAFQNLWGFV 244

Query: 828 GLSCASAVMLCLEYWCVMVLIIFAGLFDHPQITVDATSICMSVESWLFM 974
            LS ASAVMLCLE W  M LI+FAG   + ++ VDA SI  ++  W  M
Sbjct: 245 RLSLASAVMLCLEVWYFMALILFAGYLKNAELAVDALSISTNIVGWALM 293


>ref|XP_002333719.1| predicted protein [Populus trichocarpa] gi|222837995|gb|EEE76360.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  372 bits (954), Expect = e-101
 Identities = 175/289 (60%), Positives = 222/289 (76%)
 Frame = +3

Query: 108 LISSSQSFAKDLWAETKLIWYIAGPAILTSICQYSLATVTQTLLGHVGTYELAAFGMENL 287
           LI+S + F+ +   E+K +WY+AGPAI T++CQYSL  +TQ L GHVGT +LAA  +EN 
Sbjct: 42  LINSVRDFSIEFCRESKKLWYLAGPAIFTTLCQYSLGAITQLLAGHVGTLDLAAVSVENS 101

Query: 288 FVAGIGFGIMLGMGSALETLCGQAYGAGKLDMMGIYMQRSWIILFSAGVLLSLVYVFAGQ 467
            +AG  FGIMLGMGSALETLCGQAYGAG+LDM+G+YMQRSW+IL +  V+L+L+Y+FAG 
Sbjct: 102 VIAGFSFGIMLGMGSALETLCGQAYGAGQLDMLGLYMQRSWVILNATAVILTLLYIFAGP 161

Query: 468 ILRLLGQSPEIADLAGKFSIWMIPQLFAYALNFPIQKFLQAQSKVMVMAWISVAALVLHG 647
            L+L+GQ+ EI+  AG FS+WMIPQLFAYA+NFPI KFLQ+QSK+MVMA I+  ALV H 
Sbjct: 162 FLKLIGQTAEISQAAGMFSVWMIPQLFAYAMNFPIAKFLQSQSKMMVMAAIAAVALVFHA 221

Query: 648 ILSWVFIIKLEMGLVGAAITLNFSWWVMVLAQLIYILSGACKEAWSGFSWLAFAELPGFI 827
           + SW+ ++KL  GLVGAA+ LN SWW +V+AQL+YI SG C EAW+G SW AF  L GF+
Sbjct: 222 VFSWLLMLKLGWGLVGAAVVLNASWWFIVIAQLLYIFSGTCGEAWTGLSWKAFQNLWGFV 281

Query: 828 GLSCASAVMLCLEYWCVMVLIIFAGLFDHPQITVDATSICMSVESWLFM 974
            LS ASAVMLCLE W  M LI+FAG   + ++ VDA SI  ++  W  M
Sbjct: 282 RLSLASAVMLCLEVWYFMALILFAGYLKNAELAVDALSISTNIVGWAVM 330


>gb|ABR16195.1| unknown [Picea sitchensis]
          Length = 500

 Score =  371 bits (952), Expect = e-100
 Identities = 170/293 (58%), Positives = 226/293 (77%)
 Frame = +3

Query: 96  EEEKLISSSQSFAKDLWAETKLIWYIAGPAILTSICQYSLATVTQTLLGHVGTYELAAFG 275
           ++ + I+  +S A   W E+K +WY++GPAI TS+CQYSL  +TQT  GH+G  ELAA  
Sbjct: 35  DDRRPITDCRSLANGCWEESKKLWYLSGPAIFTSVCQYSLGALTQTFAGHIGELELAAVS 94

Query: 276 MENLFVAGIGFGIMLGMGSALETLCGQAYGAGKLDMMGIYMQRSWIILFSAGVLLSLVYV 455
           +EN  +AG+ FGIM+GMGSALETLCGQ+ GA +LD++G+YMQRSWIIL S  +++SL+Y+
Sbjct: 95  IENSVIAGLSFGIMMGMGSALETLCGQSVGARRLDLLGLYMQRSWIILLSTALIMSLIYI 154

Query: 456 FAGQILRLLGQSPEIADLAGKFSIWMIPQLFAYALNFPIQKFLQAQSKVMVMAWISVAAL 635
           FA  IL L+GQ  +IAD+AGKF++WM+PQLFAYA+NFP+ KFLQAQSKVMVM+ I+  AL
Sbjct: 155 FATPILVLIGQQKDIADMAGKFAVWMLPQLFAYAMNFPLAKFLQAQSKVMVMSIIAGCAL 214

Query: 636 VLHGILSWVFIIKLEMGLVGAAITLNFSWWVMVLAQLIYILSGACKEAWSGFSWLAFAEL 815
           V+H +LSW+ I K+  GL  AA+ LN SWW++VLAQ+ Y+ SGAC++AW+GFSW AF+ L
Sbjct: 215 VVHVLLSWILIFKVGWGLPAAALVLNLSWWIIVLAQIGYVFSGACRDAWAGFSWSAFSNL 274

Query: 816 PGFIGLSCASAVMLCLEYWCVMVLIIFAGLFDHPQITVDATSICMSVESWLFM 974
             F+ LS AS VMLCLE W + +LI+ AG   +P I VDA SICM++  W FM
Sbjct: 275 GAFVRLSLASGVMLCLEAWYLYLLILLAGYLKNPTIAVDAISICMNLMGWEFM 327


>ref|XP_003551225.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max]
          Length = 509

 Score =  370 bits (949), Expect = e-100
 Identities = 175/311 (56%), Positives = 232/311 (74%)
 Frame = +3

Query: 42  YYSSPSAPLLTKKSENVNEEEKLISSSQSFAKDLWAETKLIWYIAGPAILTSICQYSLAT 221
           +++   A + T KS+++      I+ +  FA++ +AE+K +WY+AGPAI TS+CQYSL  
Sbjct: 16  HHTPDPAVVFTAKSDDIAP----IAGAGDFAREFFAESKKLWYLAGPAIFTSVCQYSLGA 71

Query: 222 VTQTLLGHVGTYELAAFGMENLFVAGIGFGIMLGMGSALETLCGQAYGAGKLDMMGIYMQ 401
           VTQ   GHV T  LAA  +EN  +AG   GI  GMGSALETLCGQAYGAG++ M+G+YMQ
Sbjct: 72  VTQVFSGHVSTLALAAISIENSVIAGFCLGITFGMGSALETLCGQAYGAGQVHMLGVYMQ 131

Query: 402 RSWIILFSAGVLLSLVYVFAGQILRLLGQSPEIADLAGKFSIWMIPQLFAYALNFPIQKF 581
           RSW+IL +  +LL+L+Y+FA  +LR +GQ+  I+  AG F++WMIPQLFAYA+N+P QKF
Sbjct: 132 RSWVILNATAILLTLLYIFAAPLLRAIGQTEAISAAAGDFAVWMIPQLFAYAVNYPAQKF 191

Query: 582 LQAQSKVMVMAWISVAALVLHGILSWVFIIKLEMGLVGAAITLNFSWWVMVLAQLIYILS 761
           LQAQS++MVMAWI+ AALVLH + SW+ ++KL  GLVGAA+ LN SWW + LAQL+YI+ 
Sbjct: 192 LQAQSRIMVMAWIAAAALVLHTVFSWLLMLKLRWGLVGAAVVLNASWWFIDLAQLVYIMG 251

Query: 762 GACKEAWSGFSWLAFAELPGFIGLSCASAVMLCLEYWCVMVLIIFAGLFDHPQITVDATS 941
           GAC EAWSGF++ AF  L GF+ LS ASAVMLCLE W  M LI+FAG   + +++VDA S
Sbjct: 252 GACGEAWSGFTFKAFHNLWGFVRLSLASAVMLCLEVWYFMALILFAGYLKNAEVSVDALS 311

Query: 942 ICMSVESWLFM 974
           ICM++  W  M
Sbjct: 312 ICMNILGWTIM 322


>ref|XP_003530631.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max]
          Length = 406

 Score =  367 bits (943), Expect = 2e-99
 Identities = 178/323 (55%), Positives = 237/323 (73%), Gaps = 2/323 (0%)
 Frame = +3

Query: 12  NDQRRQMDTTYYSSP--SAPLLTKKSENVNEEEKLISSSQSFAKDLWAETKLIWYIAGPA 185
           +DQ   + T  + +P  SA + T  S+++      I  +  FA++ +AE+K +WY+AGPA
Sbjct: 5   DDQTHPLLTRRHHTPDSSAVVFTATSDDIAP----IGGAGDFAREFFAESKKLWYLAGPA 60

Query: 186 ILTSICQYSLATVTQTLLGHVGTYELAAFGMENLFVAGIGFGIMLGMGSALETLCGQAYG 365
           I TS+CQYSL  VTQ    HV T  LAA  +EN  +AG   GI  GMGSALETLCGQAYG
Sbjct: 61  IFTSVCQYSLGGVTQVFSVHVNTLALAAVSVENSVIAGFSLGITFGMGSALETLCGQAYG 120

Query: 366 AGKLDMMGIYMQRSWIILFSAGVLLSLVYVFAGQILRLLGQSPEIADLAGKFSIWMIPQL 545
           AG++ M+G+YMQRSW+IL +  +LLSL+Y+FAG +LR +GQ+  I+  AG+F++WMIPQL
Sbjct: 121 AGQVHMLGVYMQRSWVILNATAILLSLLYIFAGHMLRAIGQTEAISAAAGEFALWMIPQL 180

Query: 546 FAYALNFPIQKFLQAQSKVMVMAWISVAALVLHGILSWVFIIKLEMGLVGAAITLNFSWW 725
           FAYA+N+P QKFLQAQS++MVMAWI+ AALVLH + SW+ I++   GLVGAA+ LN SWW
Sbjct: 181 FAYAVNYPAQKFLQAQSRIMVMAWIAAAALVLHTLFSWLLILEFGWGLVGAAVVLNASWW 240

Query: 726 VMVLAQLIYILSGACKEAWSGFSWLAFAELPGFIGLSCASAVMLCLEYWCVMVLIIFAGL 905
            + +AQL+YI+SGAC EAWSGF++ AF  L GF+ LS ASAVMLCLE W  M L++FAG 
Sbjct: 241 FIDIAQLVYIVSGACGEAWSGFTFKAFHNLWGFVRLSLASAVMLCLEVWYFMALVLFAGY 300

Query: 906 FDHPQITVDATSICMSVESWLFM 974
             + +++VDA SICM++  W  M
Sbjct: 301 LKNAEVSVDALSICMNILGWTIM 323


Top