BLASTX nr result

ID: Coptis25_contig00007158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007158
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276413.1| PREDICTED: vacuolar protein sorting-associat...   300   3e-79
ref|NP_001237321.1| uncharacterized protein LOC100306343 [Glycin...   292   1e-76
ref|XP_004150360.1| PREDICTED: vacuolar protein sorting-associat...   288   1e-75
ref|XP_002307657.1| predicted protein [Populus trichocarpa] gi|2...   283   5e-74
ref|XP_002300769.1| predicted protein [Populus trichocarpa] gi|1...   282   8e-74

>ref|XP_002276413.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog 3
           [Vitis vinifera] gi|297744171|emb|CBI37141.3| unnamed
           protein product [Vitis vinifera]
          Length = 212

 Score =  300 bits (769), Expect = 3e-79
 Identities = 165/211 (78%), Positives = 172/211 (81%)
 Frame = +3

Query: 162 MNIFAKKPTPKEALRASKREMTNATRGIEKEITSLQLEEKRLVAEIKRTAKTGNEAATKI 341
           MNIF+KKPT KEALR SKREM NATRGIEKEI SLQLEEK+LVAEIKRTAKTGNEAATKI
Sbjct: 1   MNIFSKKPTAKEALRESKREMNNATRGIEKEIGSLQLEEKKLVAEIKRTAKTGNEAATKI 60

Query: 342 LARQLIRLRQQIANLQGSRAQMRGIGTHTQAMCANTAVXXXXXXXXXXXXXXNKQMAPAK 521
           LARQL+RLRQQIANLQGSRAQMRGI THTQAM ANT+V              NKQMAPAK
Sbjct: 61  LARQLVRLRQQIANLQGSRAQMRGIATHTQAMHANTSVSVGMKGASKAMAAMNKQMAPAK 120

Query: 522 QAKVIQDFQRQSAQMDMTTEMMSDAIXXXXXXXXXXXXXXXXXNQVLDEIGVDVASQLSA 701
           QAKVIQ+FQRQSAQMDMTTEMMSDAI                 NQVLDEIGVDVASQLSA
Sbjct: 121 QAKVIQEFQRQSAQMDMTTEMMSDAIDDALDNDEAEEETEDLTNQVLDEIGVDVASQLSA 180

Query: 702 APKGRIAGKKTEDVGSSGVDELEKRLAALRN 794
           APKG+IA KKTEDVGSSG+ ELEKRLAALRN
Sbjct: 181 APKGKIARKKTEDVGSSGISELEKRLAALRN 211


>ref|NP_001237321.1| uncharacterized protein LOC100306343 [Glycine max]
           gi|255628255|gb|ACU14472.1| unknown [Glycine max]
          Length = 212

 Score =  292 bits (747), Expect = 1e-76
 Identities = 159/212 (75%), Positives = 170/212 (80%)
 Frame = +3

Query: 162 MNIFAKKPTPKEALRASKREMTNATRGIEKEITSLQLEEKRLVAEIKRTAKTGNEAATKI 341
           MNIF KKPT KEALR SKR+MTNATRGIEKEI +LQLEEK+LVAEIKRTAKTGNEAATKI
Sbjct: 1   MNIFTKKPTAKEALRDSKRQMTNATRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKI 60

Query: 342 LARQLIRLRQQIANLQGSRAQMRGIGTHTQAMCANTAVXXXXXXXXXXXXXXNKQMAPAK 521
           LARQLIRLRQQIANLQGSRAQMRGI THTQAM A+++V              NKQM PAK
Sbjct: 61  LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGLKGATKAMVAMNKQMEPAK 120

Query: 522 QAKVIQDFQRQSAQMDMTTEMMSDAIXXXXXXXXXXXXXXXXXNQVLDEIGVDVASQLSA 701
           QAK+IQDFQ+QSAQMDMTTEMMSDAI                 NQVLDEIGVDVASQLSA
Sbjct: 121 QAKIIQDFQKQSAQMDMTTEMMSDAIDDALDNDEAKEETEELTNQVLDEIGVDVASQLSA 180

Query: 702 APKGRIAGKKTEDVGSSGVDELEKRLAALRNP 797
           APKGR+A K  E+V SSG+DELEKRLAALRNP
Sbjct: 181 APKGRVATKNAENVSSSGIDELEKRLAALRNP 212


>ref|XP_004150360.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           3-like [Cucumis sativus]
           gi|449513010|ref|XP_004164203.1| PREDICTED: vacuolar
           protein sorting-associated protein 2 homolog 3-like
           [Cucumis sativus]
          Length = 212

 Score =  288 bits (737), Expect = 1e-75
 Identities = 157/212 (74%), Positives = 168/212 (79%)
 Frame = +3

Query: 162 MNIFAKKPTPKEALRASKREMTNATRGIEKEITSLQLEEKRLVAEIKRTAKTGNEAATKI 341
           MNIF+KKPT KEALR SKREMT +TRGIEKEI +LQLEEK+LVAEIKRTAKTGNEAATKI
Sbjct: 1   MNIFSKKPTAKEALRESKREMTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKI 60

Query: 342 LARQLIRLRQQIANLQGSRAQMRGIGTHTQAMCANTAVXXXXXXXXXXXXXXNKQMAPAK 521
           LARQL+RLRQQIANLQGSRAQMRGI THTQAM A T+V              NKQM P K
Sbjct: 61  LARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQTSVAAGMKSASKAMSAMNKQMNPVK 120

Query: 522 QAKVIQDFQRQSAQMDMTTEMMSDAIXXXXXXXXXXXXXXXXXNQVLDEIGVDVASQLSA 701
           QAKVI++FQ+QSAQMDMTTEM+SDAI                 NQVLDEIGVDVASQLS 
Sbjct: 121 QAKVIREFQKQSAQMDMTTEMISDAIDDALDDDEAEEETEDLTNQVLDEIGVDVASQLST 180

Query: 702 APKGRIAGKKTEDVGSSGVDELEKRLAALRNP 797
           APKGRIA K TE VGSSG+DELEKRLAALRNP
Sbjct: 181 APKGRIASKNTEGVGSSGIDELEKRLAALRNP 212


>ref|XP_002307657.1| predicted protein [Populus trichocarpa] gi|222857106|gb|EEE94653.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  283 bits (724), Expect = 5e-74
 Identities = 152/212 (71%), Positives = 168/212 (79%)
 Frame = +3

Query: 162 MNIFAKKPTPKEALRASKREMTNATRGIEKEITSLQLEEKRLVAEIKRTAKTGNEAATKI 341
           MN+F+KKP+PKEALR SKREM +ATRGIE+EI +LQLEEK+LVAEIKRTAKTGN+AATKI
Sbjct: 1   MNLFSKKPSPKEALRDSKREMQHATRGIEREIGALQLEEKKLVAEIKRTAKTGNDAATKI 60

Query: 342 LARQLIRLRQQIANLQGSRAQMRGIGTHTQAMCANTAVXXXXXXXXXXXXXXNKQMAPAK 521
           LARQLIRLRQQIANLQGSRAQMRGI THTQAM A ++V              NKQMAPAK
Sbjct: 61  LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAQSSVAVGLKGASKAMEAMNKQMAPAK 120

Query: 522 QAKVIQDFQRQSAQMDMTTEMMSDAIXXXXXXXXXXXXXXXXXNQVLDEIGVDVASQLSA 701
           Q KVI++FQ+QSAQMDMTTEMMSDAI                 NQVLDEIGVDVASQLS 
Sbjct: 121 QMKVIREFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEELTNQVLDEIGVDVASQLSV 180

Query: 702 APKGRIAGKKTEDVGSSGVDELEKRLAALRNP 797
           APKG+I GK  ED  SSG+DELEKRLAA+RNP
Sbjct: 181 APKGKITGKNREDASSSGIDELEKRLAAMRNP 212


>ref|XP_002300769.1| predicted protein [Populus trichocarpa] gi|118489303|gb|ABK96456.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222842495|gb|EEE80042.1| predicted protein [Populus
           trichocarpa]
          Length = 212

 Score =  282 bits (722), Expect = 8e-74
 Identities = 153/212 (72%), Positives = 167/212 (78%)
 Frame = +3

Query: 162 MNIFAKKPTPKEALRASKREMTNATRGIEKEITSLQLEEKRLVAEIKRTAKTGNEAATKI 341
           M++F KKP PKEALR SKREM N+TRG+EKEI +LQLEEK+LVAEIKRTAKTGNEAATKI
Sbjct: 1   MSLFNKKPNPKEALRDSKREMQNSTRGLEKEIGALQLEEKKLVAEIKRTAKTGNEAATKI 60

Query: 342 LARQLIRLRQQIANLQGSRAQMRGIGTHTQAMCANTAVXXXXXXXXXXXXXXNKQMAPAK 521
           LARQLIRLRQQIANLQGSRAQMRGI THTQAM A ++V              NKQMAPAK
Sbjct: 61  LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAQSSVAVGLKGANKAMEAVNKQMAPAK 120

Query: 522 QAKVIQDFQRQSAQMDMTTEMMSDAIXXXXXXXXXXXXXXXXXNQVLDEIGVDVASQLSA 701
           Q KVI++FQ+QSAQMDMTTEMMSDAI                 NQVLDEIGVDVASQLSA
Sbjct: 121 QMKVIREFQKQSAQMDMTTEMMSDAIDDAVDSDEAEEETDELTNQVLDEIGVDVASQLSA 180

Query: 702 APKGRIAGKKTEDVGSSGVDELEKRLAALRNP 797
           APKG+IAGK  E+  SSG+DELEKRLA LRNP
Sbjct: 181 APKGKIAGKNRENASSSGIDELEKRLATLRNP 212


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