BLASTX nr result

ID: Coptis25_contig00007156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007156
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38364.1| unknown [Lotus japonicus]                              327   1e-87
gb|AFK34678.1| unknown [Lotus japonicus]                              325   3e-87
ref|XP_002266090.1| PREDICTED: GPN-loop GTPase 3 homolog [Vitis ...   325   3e-87
ref|XP_003601375.1| GPN-loop GTPase-like protein [Medicago trunc...   321   6e-86
ref|XP_004148949.1| PREDICTED: GPN-loop GTPase 3-like [Cucumis s...   320   1e-85

>gb|AFK38364.1| unknown [Lotus japonicus]
          Length = 267

 Score =  327 bits (837), Expect = 1e-87
 Identities = 156/184 (84%), Positives = 168/184 (91%)
 Frame = +2

Query: 8   MGYAQLVIGPAGSGKSTYCSSLHRHCETVRRSISIVNLDPAAENFDYPVAMDIRELIALD 187
           MGYAQLVIGPAGSGKSTYCSSLH+HCET RR+I +VNLDPAAENFDYPVAMD+RELI+LD
Sbjct: 1   MGYAQLVIGPAGSGKSTYCSSLHQHCETTRRTIHVVNLDPAAENFDYPVAMDVRELISLD 60

Query: 188 DVMEELGLGPNGGLIYCMEHLEENLDEWXXXXXXXXXXXXXXVFDCPGQIELFSHVPVLR 367
           DVMEELGLGPNGGL+YCMEHLEENLD+W              VFDCPGQIEL+SHVPVL+
Sbjct: 61  DVMEELGLGPNGGLVYCMEHLEENLDDWLDEELDNYLDDDYLVFDCPGQIELYSHVPVLK 120

Query: 368 NFVDHLKRKNFNVCVVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN 547
           NFV+HL++KNFNVCVVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN
Sbjct: 121 NFVEHLQQKNFNVCVVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN 180

Query: 548 KKDL 559
           KKDL
Sbjct: 181 KKDL 184


>gb|AFK34678.1| unknown [Lotus japonicus]
          Length = 267

 Score =  325 bits (833), Expect = 3e-87
 Identities = 155/185 (83%), Positives = 168/185 (90%)
 Frame = +2

Query: 8   MGYAQLVIGPAGSGKSTYCSSLHRHCETVRRSISIVNLDPAAENFDYPVAMDIRELIALD 187
           MGYAQLVIGPAGSGKSTYCSSLH+HCET RR+I +VNLDPAAENFDYPVAMD+RELI+LD
Sbjct: 1   MGYAQLVIGPAGSGKSTYCSSLHQHCETTRRTIHVVNLDPAAENFDYPVAMDVRELISLD 60

Query: 188 DVMEELGLGPNGGLIYCMEHLEENLDEWXXXXXXXXXXXXXXVFDCPGQIELFSHVPVLR 367
           DVMEELGLGPNG L+YCMEHLEENLD+W              VFDCPGQIEL+SHVPVL+
Sbjct: 61  DVMEELGLGPNGSLVYCMEHLEENLDDWLDEELDNYLDDDYLVFDCPGQIELYSHVPVLK 120

Query: 368 NFVDHLKRKNFNVCVVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN 547
           NFV+HL++KNFNVCVVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN
Sbjct: 121 NFVEHLQQKNFNVCVVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN 180

Query: 548 KKDLE 562
           KKDL+
Sbjct: 181 KKDLD 185


>ref|XP_002266090.1| PREDICTED: GPN-loop GTPase 3 homolog [Vitis vinifera]
           gi|296088830|emb|CBI38288.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  325 bits (833), Expect = 3e-87
 Identities = 156/185 (84%), Positives = 169/185 (91%)
 Frame = +2

Query: 8   MGYAQLVIGPAGSGKSTYCSSLHRHCETVRRSISIVNLDPAAENFDYPVAMDIRELIALD 187
           MG+AQLVIGPAGSGKSTYCSSL++HCET+RR+I IVNLDPAAE+FDYPVAMDIREL++LD
Sbjct: 1   MGFAQLVIGPAGSGKSTYCSSLYQHCETMRRTIHIVNLDPAAESFDYPVAMDIRELVSLD 60

Query: 188 DVMEELGLGPNGGLIYCMEHLEENLDEWXXXXXXXXXXXXXXVFDCPGQIELFSHVPVLR 367
           DVMEELGLGPNGGL+YCMEHLEENLD+W              VFDCPGQIELFSHVP+LR
Sbjct: 61  DVMEELGLGPNGGLMYCMEHLEENLDDWLTDELDNYLDDDYLVFDCPGQIELFSHVPMLR 120

Query: 368 NFVDHLKRKNFNVCVVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN 547
           NFVDHLKRKNFNVC VYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN
Sbjct: 121 NFVDHLKRKNFNVCAVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN 180

Query: 548 KKDLE 562
           K+D+E
Sbjct: 181 KRDIE 185


>ref|XP_003601375.1| GPN-loop GTPase-like protein [Medicago truncatula]
           gi|355490423|gb|AES71626.1| GPN-loop GTPase-like protein
           [Medicago truncatula]
          Length = 267

 Score =  321 bits (822), Expect = 6e-86
 Identities = 154/185 (83%), Positives = 167/185 (90%)
 Frame = +2

Query: 8   MGYAQLVIGPAGSGKSTYCSSLHRHCETVRRSISIVNLDPAAENFDYPVAMDIRELIALD 187
           MGYAQLVIGPAGSGKSTYCSSL++HCETVRRSI ++NLDPAAENFDYPVAMD+RELI+LD
Sbjct: 1   MGYAQLVIGPAGSGKSTYCSSLYQHCETVRRSIHVMNLDPAAENFDYPVAMDVRELISLD 60

Query: 188 DVMEELGLGPNGGLIYCMEHLEENLDEWXXXXXXXXXXXXXXVFDCPGQIELFSHVPVLR 367
           DVMEELGLGPNGGL+YCMEHLE++L+ W              VFDCPGQIEL+SHVPV R
Sbjct: 61  DVMEELGLGPNGGLVYCMEHLEDSLNGWLDEELDNYLDDEYLVFDCPGQIELYSHVPVFR 120

Query: 368 NFVDHLKRKNFNVCVVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN 547
           NFV+HLKR+NFNVCVVYLLDSQFM DVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN
Sbjct: 121 NFVEHLKRRNFNVCVVYLLDSQFMVDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN 180

Query: 548 KKDLE 562
           KKDLE
Sbjct: 181 KKDLE 185


>ref|XP_004148949.1| PREDICTED: GPN-loop GTPase 3-like [Cucumis sativus]
           gi|449524838|ref|XP_004169428.1| PREDICTED: GPN-loop
           GTPase 3-like [Cucumis sativus]
          Length = 268

 Score =  320 bits (820), Expect = 1e-85
 Identities = 152/185 (82%), Positives = 167/185 (90%)
 Frame = +2

Query: 8   MGYAQLVIGPAGSGKSTYCSSLHRHCETVRRSISIVNLDPAAENFDYPVAMDIRELIALD 187
           MGYAQLVIGPAGSGKSTYCSSL++HCETV R++ +VNLDPAAENFDYPVAMDIRELI+L+
Sbjct: 1   MGYAQLVIGPAGSGKSTYCSSLYQHCETVGRTMHVVNLDPAAENFDYPVAMDIRELISLE 60

Query: 188 DVMEELGLGPNGGLIYCMEHLEENLDEWXXXXXXXXXXXXXXVFDCPGQIELFSHVPVLR 367
           DVMEELGLGPNGGL+YCMEHLEENLD+W              VFDCPGQIELFSHVPVL+
Sbjct: 61  DVMEELGLGPNGGLLYCMEHLEENLDDWLTEELNNYMDDDYLVFDCPGQIELFSHVPVLK 120

Query: 368 NFVDHLKRKNFNVCVVYLLDSQFMTDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN 547
           NFV+HLKRKNFNVC VYLLDSQFMTD+TKFISGCMASLSAMVQLELPH+NILSKMDLVT 
Sbjct: 121 NFVEHLKRKNFNVCAVYLLDSQFMTDITKFISGCMASLSAMVQLELPHINILSKMDLVTK 180

Query: 548 KKDLE 562
           K+D+E
Sbjct: 181 KRDIE 185


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