BLASTX nr result

ID: Coptis25_contig00007152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007152
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB02625.1| G protein beta subunit-like protein [Solanum tube...    65   6e-09
emb|CBI15540.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|NP_001241455.1| uncharacterized protein LOC100778205 [Glycin...    65   6e-09
ref|XP_002281279.1| PREDICTED: guanine nucleotide-binding protei...    65   6e-09
ref|NP_001233881.1| ArcA2 protein [Solanum lycopersicum] gi|4589...    65   6e-09

>gb|ABB02625.1| G protein beta subunit-like protein [Solanum tuberosum]
          Length = 261

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = -2

Query: 223 MLYCTSLSWSSDGSTLFTGYTDGAIRVWGVGR 128
           ++YCTSLSWS+DGSTLF+GYTDG IRVWG+GR
Sbjct: 229 VIYCTSLSWSADGSTLFSGYTDGLIRVWGIGR 260


>emb|CBI15540.3| unnamed protein product [Vitis vinifera]
          Length = 1318

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 25/32 (78%), Positives = 31/32 (96%)
 Frame = -2

Query: 223  MLYCTSLSWSSDGSTLFTGYTDGAIRVWGVGR 128
            ++YCTSLSWS+DGSTLF+GYTDG +RVWG+GR
Sbjct: 1286 IIYCTSLSWSADGSTLFSGYTDGVVRVWGIGR 1317


>ref|NP_001241455.1| uncharacterized protein LOC100778205 [Glycine max]
           gi|255645048|gb|ACU23023.1| unknown [Glycine max]
          Length = 325

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 25/32 (78%), Positives = 31/32 (96%)
 Frame = -2

Query: 223 MLYCTSLSWSSDGSTLFTGYTDGAIRVWGVGR 128
           ++YCTSL+WSSDGSTLF+GYTDG +RVWG+GR
Sbjct: 293 VIYCTSLNWSSDGSTLFSGYTDGVVRVWGIGR 324


>ref|XP_002281279.1| PREDICTED: guanine nucleotide-binding protein subunit beta-like
           protein isoform 1 [Vitis vinifera]
           gi|359491001|ref|XP_003634197.1| PREDICTED: guanine
           nucleotide-binding protein subunit beta-like protein
           isoform 2 [Vitis vinifera] gi|147784318|emb|CAN61810.1|
           hypothetical protein VITISV_026180 [Vitis vinifera]
          Length = 327

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 25/32 (78%), Positives = 31/32 (96%)
 Frame = -2

Query: 223 MLYCTSLSWSSDGSTLFTGYTDGAIRVWGVGR 128
           ++YCTSLSWS+DGSTLF+GYTDG +RVWG+GR
Sbjct: 295 IIYCTSLSWSADGSTLFSGYTDGVVRVWGIGR 326


>ref|NP_001233881.1| ArcA2 protein [Solanum lycopersicum] gi|4589836|dbj|BAA76896.1|
           LeArcA2 protein [Solanum lycopersicum]
          Length = 326

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = -2

Query: 223 MLYCTSLSWSSDGSTLFTGYTDGAIRVWGVGR 128
           ++YCTSLSWS+DGSTLF+GYTDG IRVWG+GR
Sbjct: 294 VIYCTSLSWSADGSTLFSGYTDGLIRVWGIGR 325


Top