BLASTX nr result

ID: Coptis25_contig00007150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007150
         (1173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305570.1| predicted protein [Populus trichocarpa] gi|2...   137   4e-30
ref|XP_002518475.1| hypothetical protein RCOM_0904330 [Ricinus c...   135   2e-29
emb|CBI26645.3| unnamed protein product [Vitis vinifera]              133   8e-29
ref|XP_003632958.1| PREDICTED: uncharacterized protein LOC100854...   132   2e-28
ref|NP_001240052.1| uncharacterized protein LOC100796494 [Glycin...   128   2e-27

>ref|XP_002305570.1| predicted protein [Populus trichocarpa] gi|222848534|gb|EEE86081.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  137 bits (346), Expect = 4e-30
 Identities = 78/153 (50%), Positives = 96/153 (62%), Gaps = 12/153 (7%)
 Frame = +3

Query: 132 DNNSKGRKPKDPSPVSNLRRIP-TASKMILRTKSSING-----AKMQQSAPVNIPDWSKI 293
           D++S  + P      S+   +P TA +MI  TK++        A+ Q SAPVNIPDWSKI
Sbjct: 42  DSSSNSKYPSSGPSFSSAWHLPSTAPRMIPATKTTATNHGGKAAQQQSSAPVNIPDWSKI 101

Query: 294 YRKNTHKSTQSSWTDDDTN------DDHGRYNXXXXXXXXXXXWVPPHEWIAKKLARSQI 455
           Y K++ +   +SW DD         DDH   +            VPPHEW+A+KLARSQI
Sbjct: 102 YGKDS-RDIMASWVDDHNGIAYGDGDDHVNDDVDDCDEDGDDGIVPPHEWLARKLARSQI 160

Query: 456 SSFSVCEGAGRTLKGRDLSKVRNAVLTRTGFLE 554
           SSFSVCEG GRTLKGRDLSKVRNA+LT+TGFLE
Sbjct: 161 SSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE 193


>ref|XP_002518475.1| hypothetical protein RCOM_0904330 [Ricinus communis]
           gi|223542320|gb|EEF43862.1| hypothetical protein
           RCOM_0904330 [Ricinus communis]
          Length = 223

 Score =  135 bits (340), Expect = 2e-29
 Identities = 96/223 (43%), Positives = 113/223 (50%), Gaps = 46/223 (20%)
 Frame = +3

Query: 24  MADRYSYYTNNST---SRGRSPIRNXXXXXXXXXXXXRKDNNSKGRKPKD----PSPVSN 182
           MAD +    NNS    SR      +            R+D++ K RK KD     SP S+
Sbjct: 1   MADWHGMMGNNSVGGYSRRSMRDEDFEEEDIWSVVKEREDSSPKIRKSKDNYCSSSPSSS 60

Query: 183 LRRIPTASKMILRTK-----------SSINGAK--MQQSAPVNIPDWSKIYRKNTHKSTQ 323
             R+ +A +MI R             +S + AK   Q SAPVNIPDWSKIY KNT   + 
Sbjct: 61  AWRLHSAPRMIPRANIVSPTSAGVPATSTHEAKAVQQSSAPVNIPDWSKIYGKNTRMGSW 120

Query: 324 SSWTDDDTNDD-------------HGRYNXXXXXXXXXXX-------------WVPPHEW 425
           ++  DDD +DD             HG  N                         VPPHEW
Sbjct: 121 ANNDDDDDDDDDDDDGIVYDDGEDHGHVNGNGYYYNYNNNNVDVNGNDDEEDEMVPPHEW 180

Query: 426 IAKKLARSQISSFSVCEGAGRTLKGRDLSKVRNAVLTRTGFLE 554
           IAKKLARSQISSFSVCEG GRTLKGRDLSKVRNA+L +TGFLE
Sbjct: 181 IAKKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILAKTGFLE 223


>emb|CBI26645.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  133 bits (335), Expect = 8e-29
 Identities = 84/183 (45%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
 Frame = +3

Query: 18  SSMADRYSYYTNNSTSRGRSPIRNXXXXXXXXXXXXRKDNNSKGRKPKDPSPVSNLRRIP 197
           SSM +RY  Y   S +       +            R+D NS      + S  S  RR P
Sbjct: 59  SSMEERYGLYRQGSRALRSMRNGDFQEGDVWDVLNKREDYNSVVGSSMESSHFSP-RRPP 117

Query: 198 TASKMILRTKSSINGAK----MQQSAPVNIPDWSKIYRKNTHKSTQSSWTDDDTNDDHGR 365
           +A++MI R   + N       +QQSAPV IPDWSKIY +N+ K++ ++ +  D NDD G 
Sbjct: 118 SAARMIGRVHGNSNPIHEPRVVQQSAPVKIPDWSKIYGENSKKASSNNASWLDNNDDEGD 177

Query: 366 YNXXXXXXXXXXXWVPPHEWIAKKLARSQISSFSVCEGAGRTLKGRDLSKVRNAVLTRTG 545
                         +PPHEW+AKK ARSQISSFSV EG GRTLKGRDLS+VRNAVLT+TG
Sbjct: 178 --------------LPPHEWLAKKYARSQISSFSVFEGVGRTLKGRDLSRVRNAVLTKTG 223

Query: 546 FLE 554
           FLE
Sbjct: 224 FLE 226


>ref|XP_003632958.1| PREDICTED: uncharacterized protein LOC100854465 [Vitis vinifera]
          Length = 190

 Score =  132 bits (331), Expect = 2e-28
 Identities = 91/193 (47%), Positives = 111/193 (57%), Gaps = 16/193 (8%)
 Frame = +3

Query: 24  MADRYSYYTNNSTSRGRSPI-RNXXXXXXXXXXXXRKDNNSKGRKPKD------PSPVSN 182
           MA+R++   N+S   GRS    +            R+D++   RK KD       S  S+
Sbjct: 1   MANRHAAIGNSSGGGGRSMRDEDFDEEDVWAVVKDREDSSPIMRKSKDYSSGSSSSSSSS 60

Query: 183 LRRIPTASKMILRTKSS-INGAKMQQ--SAPVNIPDWSKIYRKNTHKSTQSSWTD--DDT 347
             R+PTA + I R  ++  + AK+ Q  SAP+NIPDWSKIYRKN   S    W D  +D 
Sbjct: 61  AWRLPTAPRGIRRGNNTPSHEAKLVQHSSAPMNIPDWSKIYRKN---SRAMPWVDGVEDV 117

Query: 348 NDDHGRYNXXXXXXXXXXXW----VPPHEWIAKKLARSQISSFSVCEGAGRTLKGRDLSK 515
           ND    +                 VPPHEWIA+KLA SQISSFSVCEG GRTLKGRDLSK
Sbjct: 118 NDAGNTHQICVVDDDDDDDGDDDIVPPHEWIARKLASSQISSFSVCEGVGRTLKGRDLSK 177

Query: 516 VRNAVLTRTGFLE 554
           VRNAVLT+TGFLE
Sbjct: 178 VRNAVLTKTGFLE 190


>ref|NP_001240052.1| uncharacterized protein LOC100796494 [Glycine max]
           gi|255645861|gb|ACU23421.1| unknown [Glycine max]
          Length = 195

 Score =  128 bits (322), Expect = 2e-27
 Identities = 75/153 (49%), Positives = 98/153 (64%), Gaps = 13/153 (8%)
 Frame = +3

Query: 135 NNSKGRKPKDPSPVSNLRRIPTASKMILRTKSSINGAK---------MQQSAPVNIPDWS 287
           ++S  RK KD    S++   P++++MI R+ +S N +          +QQSAPVNIPDWS
Sbjct: 41  SSSGVRKFKDKGKSSSVPARPSSARMIPRSSNSSNNSSASSSNEAKVLQQSAPVNIPDWS 100

Query: 288 KIYRKNTHKSTQSSWTDDDTNDDHGRY----NXXXXXXXXXXXWVPPHEWIAKKLARSQI 455
           KIYR  T K++ S + DD   D    Y    +            +PPHE+IA++LARS+I
Sbjct: 101 KIYRTKTPKNSVSRFDDDYDGDGAANYGGDSDEDGEENDESDSKLPPHEFIARRLARSRI 160

Query: 456 SSFSVCEGAGRTLKGRDLSKVRNAVLTRTGFLE 554
           SSFSV EGAGRTLKGRDLSKVRN VL++TGFLE
Sbjct: 161 SSFSVLEGAGRTLKGRDLSKVRNDVLSKTGFLE 193


Top