BLASTX nr result

ID: Coptis25_contig00007145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007145
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524031.1| 30S ribosomal protein S5, putative [Ricinus ...   241   4e-62
ref|XP_004151847.1| PREDICTED: uncharacterized protein LOC101205...   239   2e-61
emb|CBI21991.3| unnamed protein product [Vitis vinifera]              238   3e-61
ref|XP_002276769.1| PREDICTED: uncharacterized protein LOC100267...   238   3e-61
ref|XP_002319240.1| predicted protein [Populus trichocarpa] gi|2...   238   4e-61

>ref|XP_002524031.1| 30S ribosomal protein S5, putative [Ricinus communis]
           gi|223536758|gb|EEF38399.1| 30S ribosomal protein S5,
           putative [Ricinus communis]
          Length = 502

 Score =  241 bits (615), Expect = 4e-62
 Identities = 116/142 (81%), Positives = 127/142 (89%)
 Frame = +3

Query: 3   GGQVASFTALVACGNLHGVVGFARAKGPKVPIALQKARVKCFQNLHYVELHEEHTIAHAV 182
           GGQV  +TA++ACGN HGVVGFA+AKGP VP+ALQKA  KCFQNLHYVE HEEHTIAHA+
Sbjct: 361 GGQVVKYTAILACGNYHGVVGFAKAKGPAVPVALQKAYEKCFQNLHYVERHEEHTIAHAI 420

Query: 183 QSNYKKTKVYLWPASTRTGMIAGKTVKCILKLAGFKNIKSKVIGSRNPLNTVKAVFKALN 362
           Q+ YKKTKVYLWPASTRTGM AG+ V+ IL LAGFKN+KSKVIGSRNP NTVKAVF ALN
Sbjct: 421 QTTYKKTKVYLWPASTRTGMKAGRIVQTILNLAGFKNVKSKVIGSRNPHNTVKAVFNALN 480

Query: 363 AIETPKDVQEKFGRTVVESYLL 428
           +IETPKDVQEKFGRTVVE YLL
Sbjct: 481 SIETPKDVQEKFGRTVVEKYLL 502


>ref|XP_004151847.1| PREDICTED: uncharacterized protein LOC101205390 [Cucumis sativus]
           gi|449524434|ref|XP_004169228.1| PREDICTED:
           uncharacterized LOC101205390 [Cucumis sativus]
          Length = 500

 Score =  239 bits (610), Expect = 2e-61
 Identities = 113/142 (79%), Positives = 128/142 (90%)
 Frame = +3

Query: 3   GGQVASFTALVACGNLHGVVGFARAKGPKVPIALQKARVKCFQNLHYVELHEEHTIAHAV 182
           GG+V  +TA++ACGN HG+VG+A AKGP VPIALQKA  KCFQNLHYVE HEEHTIAHAV
Sbjct: 359 GGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAV 418

Query: 183 QSNYKKTKVYLWPASTRTGMIAGKTVKCILKLAGFKNIKSKVIGSRNPLNTVKAVFKALN 362
           Q+ YKKTK+YLWPAST TGM AGKTV+ +L LAGFKN+KSKVIGSRNPLNT++A+FKALN
Sbjct: 419 QTAYKKTKIYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPLNTMRALFKALN 478

Query: 363 AIETPKDVQEKFGRTVVESYLL 428
           AIETPKD+QEKFGRTVVE YLL
Sbjct: 479 AIETPKDIQEKFGRTVVEKYLL 500


>emb|CBI21991.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score =  238 bits (608), Expect = 3e-61
 Identities = 115/142 (80%), Positives = 127/142 (89%)
 Frame = +3

Query: 3   GGQVASFTALVACGNLHGVVGFARAKGPKVPIALQKARVKCFQNLHYVELHEEHTIAHAV 182
           GGQV  +TA++ACGN HGVVG+A+AKGP +PIALQKA  KCFQNLHYVE +EEHTIAHAV
Sbjct: 263 GGQVVKYTAILACGNYHGVVGYAKAKGPAIPIALQKAYEKCFQNLHYVERYEEHTIAHAV 322

Query: 183 QSNYKKTKVYLWPASTRTGMIAGKTVKCILKLAGFKNIKSKVIGSRNPLNTVKAVFKALN 362
           Q+ YKKTKVYLWPA T TGM AG+TV+ IL LAGFKN+KSKVIGSRNP NTVKA+FKALN
Sbjct: 323 QTTYKKTKVYLWPAQTTTGMKAGRTVQTILNLAGFKNVKSKVIGSRNPHNTVKALFKALN 382

Query: 363 AIETPKDVQEKFGRTVVESYLL 428
           AIETPKDVQEKFGRTVVE YLL
Sbjct: 383 AIETPKDVQEKFGRTVVEKYLL 404


>ref|XP_002276769.1| PREDICTED: uncharacterized protein LOC100267778 [Vitis vinifera]
          Length = 499

 Score =  238 bits (608), Expect = 3e-61
 Identities = 115/142 (80%), Positives = 127/142 (89%)
 Frame = +3

Query: 3   GGQVASFTALVACGNLHGVVGFARAKGPKVPIALQKARVKCFQNLHYVELHEEHTIAHAV 182
           GGQV  +TA++ACGN HGVVG+A+AKGP +PIALQKA  KCFQNLHYVE +EEHTIAHAV
Sbjct: 358 GGQVVKYTAILACGNYHGVVGYAKAKGPAIPIALQKAYEKCFQNLHYVERYEEHTIAHAV 417

Query: 183 QSNYKKTKVYLWPASTRTGMIAGKTVKCILKLAGFKNIKSKVIGSRNPLNTVKAVFKALN 362
           Q+ YKKTKVYLWPA T TGM AG+TV+ IL LAGFKN+KSKVIGSRNP NTVKA+FKALN
Sbjct: 418 QTTYKKTKVYLWPAQTTTGMKAGRTVQTILNLAGFKNVKSKVIGSRNPHNTVKALFKALN 477

Query: 363 AIETPKDVQEKFGRTVVESYLL 428
           AIETPKDVQEKFGRTVVE YLL
Sbjct: 478 AIETPKDVQEKFGRTVVEKYLL 499


>ref|XP_002319240.1| predicted protein [Populus trichocarpa] gi|222857616|gb|EEE95163.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  238 bits (607), Expect = 4e-61
 Identities = 112/142 (78%), Positives = 129/142 (90%)
 Frame = +3

Query: 3   GGQVASFTALVACGNLHGVVGFARAKGPKVPIALQKARVKCFQNLHYVELHEEHTIAHAV 182
           GG+V  +TA++ACGN HGV+GFA+AKGP+V +A+QKAR KCFQNLHY+E HEEHTIA+AV
Sbjct: 377 GGRVVKYTAMLACGNYHGVIGFAKAKGPRVHVAIQKAREKCFQNLHYIERHEEHTIANAV 436

Query: 183 QSNYKKTKVYLWPASTRTGMIAGKTVKCILKLAGFKNIKSKVIGSRNPLNTVKAVFKALN 362
           Q+ YKKTK+YLWPA TRTGM AGKTVK IL LAGFKN+KSKVIGSRNP NTV+A+FKALN
Sbjct: 437 QTQYKKTKLYLWPAPTRTGMKAGKTVKAILNLAGFKNVKSKVIGSRNPYNTVRALFKALN 496

Query: 363 AIETPKDVQEKFGRTVVESYLL 428
           AIETPKDVQEKFGRTVVE +LL
Sbjct: 497 AIETPKDVQEKFGRTVVEKHLL 518


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