BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007137
         (1954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275393.1| PREDICTED: transcription factor bHLH144 isof...   208   4e-51
emb|CAN76054.1| hypothetical protein VITISV_036406 [Vitis vinifera]   208   4e-51
ref|XP_002519719.1| conserved hypothetical protein [Ricinus comm...   207   1e-50
gb|ACZ04445.1| bHLH1 transcription factor [Hevea brasiliensis]        191   8e-46
ref|XP_002316733.1| predicted protein [Populus trichocarpa] gi|2...   181   8e-43

>ref|XP_002275393.1| PREDICTED: transcription factor bHLH144 isoform 2 [Vitis vinifera]
            gi|225463440|ref|XP_002275365.1| PREDICTED: transcription
            factor bHLH144 isoform 1 [Vitis vinifera]
          Length = 244

 Score =  208 bits (530), Expect = 4e-51
 Identities = 118/241 (48%), Positives = 153/241 (63%), Gaps = 2/241 (0%)
 Frame = +3

Query: 771  LMSDKQFFREKAVSPTRYQVGASYMNYGPVEHDLGPILPL-APDLRPFHGVEFQPSEVCP 947
            +  D+QF  EK + P   +VG  YM   PVE   G + P  A DL PFHGVEFQPS+VCP
Sbjct: 1    MQRDQQFCPEKVMLPLANEVGNDYMYNTPVESAFGAVFPPGAKDLGPFHGVEFQPSDVCP 60

Query: 948  KNFIIFDQTNNRSRIMYHPALTPQKFNSPGIDMHAAFLEDNDTRKNTCTENAESSSFLKE 1127
            KNFIIFDQT++RS+IM+HPA+  QKFN P +++ A ++ +N  ++    +  E+SS LKE
Sbjct: 61   KNFIIFDQTDHRSQIMFHPAIA-QKFNCPSLNLCATYIHNNLEKREINIDEGEASSALKE 119

Query: 1128 DSKDIDALMS-XXXXXXXXXXXVVSTARTFGSYECGSPDSCSNFCSKSRKPRFXXXXXXX 1304
            DS+DIDAL+S             VSTART G+Y     D+CS++ SK RK +        
Sbjct: 120  DSEDIDALLSLEEEDQEEYDEEEVSTARTHGNYGSNCEDTCSSYGSKPRKIKL-SSSILK 178

Query: 1305 XXXXXXXXXXXXQRRRMKKMVKALRSIVPGADQMNTATVIDEAVTYLKSLKVEVKKHGLG 1484
                        +R++MKKMVKALR IVPG+ QMNT  V+DEAV YLKSLKVEV+K G+ 
Sbjct: 179  SSSSGSSCNSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLGVS 238

Query: 1485 N 1487
            N
Sbjct: 239  N 239


>emb|CAN76054.1| hypothetical protein VITISV_036406 [Vitis vinifera]
          Length = 289

 Score =  208 bits (530), Expect = 4e-51
 Identities = 118/241 (48%), Positives = 153/241 (63%), Gaps = 2/241 (0%)
 Frame = +3

Query: 771  LMSDKQFFREKAVSPTRYQVGASYMNYGPVEHDLGPILPL-APDLRPFHGVEFQPSEVCP 947
            +  D+QF  EK + P   +VG  YM   PVE   G + P  A DL PFHGVEFQPS+VCP
Sbjct: 46   MQRDQQFCPEKVMLPLANEVGNDYMYNTPVESAFGAVFPPGAKDLGPFHGVEFQPSDVCP 105

Query: 948  KNFIIFDQTNNRSRIMYHPALTPQKFNSPGIDMHAAFLEDNDTRKNTCTENAESSSFLKE 1127
            KNFIIFDQT++RS+IM+HPA+  QKFN P +++ A ++ +N  ++    +  E+SS LKE
Sbjct: 106  KNFIIFDQTDHRSQIMFHPAIA-QKFNCPSLNLCATYIHNNLEKREINIDEGEASSALKE 164

Query: 1128 DSKDIDALMS-XXXXXXXXXXXVVSTARTFGSYECGSPDSCSNFCSKSRKPRFXXXXXXX 1304
            DS+DIDAL+S             VSTART G+Y     D+CS++ SK RK +        
Sbjct: 165  DSEDIDALLSLEEEDQEEYDEEEVSTARTHGNYGSNCEDTCSSYGSKPRKIKL-SSSILK 223

Query: 1305 XXXXXXXXXXXXQRRRMKKMVKALRSIVPGADQMNTATVIDEAVTYLKSLKVEVKKHGLG 1484
                        +R++MKKMVKALR IVPG+ QMNT  V+DEAV YLKSLKVEV+K G+ 
Sbjct: 224  SSSSGSSCNSERKRQKMKKMVKALRGIVPGSSQMNTVAVLDEAVRYLKSLKVEVQKLGVS 283

Query: 1485 N 1487
            N
Sbjct: 284  N 284


>ref|XP_002519719.1| conserved hypothetical protein [Ricinus communis]
            gi|223541136|gb|EEF42692.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 239

 Score =  207 bits (526), Expect = 1e-50
 Identities = 123/244 (50%), Positives = 152/244 (62%), Gaps = 2/244 (0%)
 Frame = +3

Query: 771  LMSDKQFFREKAVSPTRYQVGASYMNYGPVEHDLGPILPLAPD-LRPFHGVEFQPSEVCP 947
            + SD+ F R+KAV     Q G +YM+  PV        P A   L P HG+EFQPSEVCP
Sbjct: 1    MQSDQHFRRKKAVPHFANQRGNNYMHV-PVASSFPAAPPTAAKHLMPVHGIEFQPSEVCP 59

Query: 948  KNFIIFDQTNNRSRIMYHPALTPQKFNSPGIDMHAAFLEDNDTRKNTCTENAESSSFLKE 1127
            KNFIIFDQT++RS+IM+HP +   +FN PG++MHA++ ++N  R+       E SS LKE
Sbjct: 60   KNFIIFDQTDHRSQIMFHPTVA-HRFNGPGLNMHASYFQENYEREAVDDTGREMSS-LKE 117

Query: 1128 DSKDIDALMSXXXXXXXXXXXV-VSTARTFGSYECGSPDSCSNFCSKSRKPRFXXXXXXX 1304
            DS DIDAL+S             VSTART+G+Y   SPDSCS + SK RK          
Sbjct: 118  DSDDIDALLSLEEEEQDECDEEEVSTARTYGNYGSSSPDSCSTYGSKPRKT--GSSSVQK 175

Query: 1305 XXXXXXXXXXXXQRRRMKKMVKALRSIVPGADQMNTATVIDEAVTYLKSLKVEVKKHGLG 1484
                        +R++MKKMVKALR IVPG DQMNT TV+DEAV YLKSLKVEV+K G+G
Sbjct: 176  SPGSGSSCSTERKRQKMKKMVKALRGIVPGGDQMNTVTVLDEAVRYLKSLKVEVQKIGVG 235

Query: 1485 NFSN 1496
            N  N
Sbjct: 236  NLKN 239


>gb|ACZ04445.1| bHLH1 transcription factor [Hevea brasiliensis]
          Length = 241

 Score =  191 bits (484), Expect = 8e-46
 Identities = 117/244 (47%), Positives = 144/244 (59%), Gaps = 2/244 (0%)
 Frame = +3

Query: 771  LMSDKQFFREKAVSPTRYQVGASYMNYGPVEHDLGPILPLAPDLRPFHGVEFQPSEVCPK 950
            + SD+QF   KAV     Q G +YM+          + P    L P HG+EFQPSEVCPK
Sbjct: 1    MQSDQQFQPNKAVPHFANQRGNNYMHIPVAPSFAAALPPTGKHLMPAHGIEFQPSEVCPK 60

Query: 951  NFIIFDQTNNRSRIMYHPALTPQKFNSPGIDMHAAFLEDN-DTRKNTCTENAESSSFLKE 1127
            NFIIFDQ ++RS+IM+HPA+   KF+ PG++M+ ++  +N D  +    E   SSS LKE
Sbjct: 61   NFIIFDQNDHRSQIMFHPAVA-HKFSGPGLNMYGSYNPENFDREEINGIEREVSSSSLKE 119

Query: 1128 DSKDIDALMS-XXXXXXXXXXXVVSTARTFGSYECGSPDSCSNFCSKSRKPRFXXXXXXX 1304
            DS DIDAL+S             VSTART+G++   SPDS S   SK  K          
Sbjct: 120  DSDDIDALLSLEEDEQDEYDEEEVSTARTYGNHGSNSPDSYSTCGSKPWKN--GSSSIQN 177

Query: 1305 XXXXXXXXXXXXQRRRMKKMVKALRSIVPGADQMNTATVIDEAVTYLKSLKVEVKKHGLG 1484
                        +R++MKKMVKALR IVPG DQMNT  VIDEAV YLKSLKVEV+K G G
Sbjct: 178  SSGNGSSINSERKRQKMKKMVKALRGIVPGGDQMNTVMVIDEAVRYLKSLKVEVQKIGAG 237

Query: 1485 NFSN 1496
            NF N
Sbjct: 238  NFKN 241


>ref|XP_002316733.1| predicted protein [Populus trichocarpa] gi|222859798|gb|EEE97345.1|
            predicted protein [Populus trichocarpa]
          Length = 227

 Score =  181 bits (458), Expect = 8e-43
 Identities = 107/230 (46%), Positives = 136/230 (59%), Gaps = 2/230 (0%)
 Frame = +3

Query: 813  PTRYQVGASYMNYGPVEHDLGPILPLAPD-LRPFHGVEFQPSEVCPKNFIIFDQTNNRSR 989
            P   QV  + M++ PV      + PLA   L P HG+EFQ SE+CP+NFIIFDQ ++RS+
Sbjct: 3    PLTNQVDNNNMHF-PVATTFAAVQPLAAKHLMPVHGIEFQSSEICPRNFIIFDQADHRSQ 61

Query: 990  IMYHPALTPQKFNSPGIDMHAAFLEDNDTRKNTCTENAESSSFLKEDSKDIDALMSXXXX 1169
            +MY+PA+       P  ++HA ++++N  R +T     E SS LKEDS DIDALMS    
Sbjct: 62   VMYNPAVA-HNHGGPDFNIHATYIQENFERTDTYNVEREISSSLKEDSDDIDALMSLEEE 120

Query: 1170 XXXXXXXV-VSTARTFGSYECGSPDSCSNFCSKSRKPRFXXXXXXXXXXXXXXXXXXXQR 1346
                     VSTART  +Y   SPDSCS++     KP                     +R
Sbjct: 121  EPEECDGEEVSTARTCRNYGSSSPDSCSSY---GAKPMKNGSSVQKCSSSGSSSNSERKR 177

Query: 1347 RRMKKMVKALRSIVPGADQMNTATVIDEAVTYLKSLKVEVKKHGLGNFSN 1496
            ++MK MVK LR IVPG DQMNT TV+DEAV YLKSLKVEV+K G+GNF N
Sbjct: 178  QKMKTMVKTLRGIVPGGDQMNTVTVLDEAVRYLKSLKVEVQKLGVGNFKN 227