BLASTX nr result

ID: Coptis25_contig00007129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007129
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138687.1| PREDICTED: transcription initiation factor T...   164   2e-38
ref|XP_002267115.1| PREDICTED: transcription initiation factor T...   164   2e-38
ref|NP_001236890.1| uncharacterized protein LOC100500618 [Glycin...   164   3e-38
ref|XP_002515379.1| transcription factor, putative [Ricinus comm...   164   3e-38
ref|XP_002266754.1| PREDICTED: transcription initiation factor T...   163   4e-38

>ref|XP_004138687.1| PREDICTED: transcription initiation factor TFIID subunit 10-like
           [Cucumis sativus] gi|449493281|ref|XP_004159243.1|
           PREDICTED: transcription initiation factor TFIID subunit
           10-like [Cucumis sativus]
          Length = 136

 Score =  164 bits (416), Expect = 2e-38
 Identities = 82/108 (75%), Positives = 90/108 (83%)
 Frame = -2

Query: 752 YTPTIPDELVEHYVAKSGFQCPDVRLIRLVAVATQKFIAEVATDALQHCKARQTAVVXXX 573
           YTPTIPDELVEHY+ KSGFQCPDVRLIRLVAVATQKF+A+VA+DALQHCKARQ AVV   
Sbjct: 28  YTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDK 87

Query: 572 XXXXXXXXRLTLTMEDLSKALQEFGVNMKHQEYFADSPSTGVDPVREE 429
                   RL LTM+DLSKAL+E+GVN+KHQEYFADSPSTGVD    E
Sbjct: 88  RDKQQKDKRLILTMDDLSKALREYGVNVKHQEYFADSPSTGVDSTSRE 135


>ref|XP_002267115.1| PREDICTED: transcription initiation factor TFIID subunit 10 [Vitis
           vinifera] gi|302143599|emb|CBI22352.3| unnamed protein
           product [Vitis vinifera]
          Length = 136

 Score =  164 bits (416), Expect = 2e-38
 Identities = 83/108 (76%), Positives = 91/108 (84%)
 Frame = -2

Query: 752 YTPTIPDELVEHYVAKSGFQCPDVRLIRLVAVATQKFIAEVATDALQHCKARQTAVVXXX 573
           YTPTIPDELVEHY+AKSGFQCPDVRLIRLVAVATQKF+AEVA+DALQ CKARQ+AVV   
Sbjct: 28  YTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVASDALQQCKARQSAVVKDK 87

Query: 572 XXXXXXXXRLTLTMEDLSKALQEFGVNMKHQEYFADSPSTGVDPVREE 429
                   RL LTMEDLSKAL+E GVN+KHQEYFADSPSTG+DP   +
Sbjct: 88  RDKQQKDKRLILTMEDLSKALRECGVNVKHQEYFADSPSTGMDPASRD 135


>ref|NP_001236890.1| uncharacterized protein LOC100500618 [Glycine max]
           gi|255630766|gb|ACU15744.1| unknown [Glycine max]
          Length = 136

 Score =  164 bits (414), Expect = 3e-38
 Identities = 81/108 (75%), Positives = 88/108 (81%)
 Frame = -2

Query: 752 YTPTIPDELVEHYVAKSGFQCPDVRLIRLVAVATQKFIAEVATDALQHCKARQTAVVXXX 573
           YTPTIPDELVEHY+AKSGFQCPDVRL RLVAVATQKF+AEVA DALQHCKARQ  +    
Sbjct: 28  YTPTIPDELVEHYLAKSGFQCPDVRLTRLVAVATQKFVAEVAGDALQHCKARQATIPKDK 87

Query: 572 XXXXXXXXRLTLTMEDLSKALQEFGVNMKHQEYFADSPSTGVDPVREE 429
                   RL LTMEDLSKAL+E+GVN+KHQEYFADSPSTG+DP   E
Sbjct: 88  RDKQQKDKRLVLTMEDLSKALREYGVNLKHQEYFADSPSTGMDPATRE 135


>ref|XP_002515379.1| transcription factor, putative [Ricinus communis]
           gi|223545323|gb|EEF46828.1| transcription factor,
           putative [Ricinus communis]
          Length = 143

 Score =  164 bits (414), Expect = 3e-38
 Identities = 81/108 (75%), Positives = 89/108 (82%)
 Frame = -2

Query: 752 YTPTIPDELVEHYVAKSGFQCPDVRLIRLVAVATQKFIAEVATDALQHCKARQTAVVXXX 573
           YTPTIPDELVEHY+ KSGFQCPDVRL+RLVAVATQKF+AEVA DALQ CKARQ+AVV   
Sbjct: 35  YTPTIPDELVEHYLGKSGFQCPDVRLVRLVAVATQKFVAEVANDALQQCKARQSAVVKDK 94

Query: 572 XXXXXXXXRLTLTMEDLSKALQEFGVNMKHQEYFADSPSTGVDPVREE 429
                   RL LTMEDLSKAL E+GVN+KHQEYFADSPSTG+DP   +
Sbjct: 95  REKQQKDKRLILTMEDLSKALHEYGVNVKHQEYFADSPSTGMDPASRD 142


>ref|XP_002266754.1| PREDICTED: transcription initiation factor TFIID subunit 10 [Vitis
           vinifera] gi|302143597|emb|CBI22350.3| unnamed protein
           product [Vitis vinifera]
          Length = 136

 Score =  163 bits (413), Expect = 4e-38
 Identities = 81/108 (75%), Positives = 91/108 (84%)
 Frame = -2

Query: 752 YTPTIPDELVEHYVAKSGFQCPDVRLIRLVAVATQKFIAEVATDALQHCKARQTAVVXXX 573
           YTPTIPDELVEHY+AKSGFQCPDVRLIRLVAVATQKF+ EVA+DALQ CKARQ+AVV   
Sbjct: 28  YTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVTEVASDALQQCKARQSAVVKDK 87

Query: 572 XXXXXXXXRLTLTMEDLSKALQEFGVNMKHQEYFADSPSTGVDPVREE 429
                   RL LTMEDLSKAL+E+GVN+KHQEYFADSPS+G+DP   +
Sbjct: 88  RDKQQKDKRLILTMEDLSKALREYGVNVKHQEYFADSPSSGMDPASRD 135


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