BLASTX nr result

ID: Coptis25_contig00007127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007127
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322574.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002307928.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_003632607.1| PREDICTED: uncharacterized protein LOC100853...    83   2e-14
ref|XP_003566800.1| PREDICTED: uncharacterized protein LOC100836...    83   2e-14
emb|CBI32879.3| unnamed protein product [Vitis vinifera]               83   2e-14

>ref|XP_002322574.1| predicted protein [Populus trichocarpa] gi|222867204|gb|EEF04335.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/61 (67%), Positives = 48/61 (78%)
 Frame = -3

Query: 239 LRIILERKLRDLFNLFGCMLEPATLPTQRYMAMLYTITTLILALQSIYYGHIYHHPKANK 60
           L  +L   + DLFN+FGCMLEPATLPTQ YMA+LYTITT +L  Q+IYYGHIYH  K N+
Sbjct: 61  LAFLLTWIIGDLFNVFGCMLEPATLPTQYYMAVLYTITTSVLTAQTIYYGHIYHRLKRNR 120

Query: 59  R 57
           R
Sbjct: 121 R 121


>ref|XP_002307928.1| predicted protein [Populus trichocarpa] gi|222853904|gb|EEE91451.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/63 (60%), Positives = 50/63 (79%)
 Frame = -3

Query: 239 LRIILERKLRDLFNLFGCMLEPATLPTQRYMAMLYTITTLILALQSIYYGHIYHHPKANK 60
           L  +L   + DLFN+FGCMLEPATLPTQ YMA+LYT+T+ +L  Q+++YGHIYH  K+N+
Sbjct: 61  LAFLLTWIIGDLFNVFGCMLEPATLPTQYYMAVLYTMTSTLLTAQTVHYGHIYHRLKSNR 120

Query: 59  RGL 51
           R L
Sbjct: 121 RRL 123


>ref|XP_003632607.1| PREDICTED: uncharacterized protein LOC100853498 [Vitis vinifera]
          Length = 406

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/50 (76%), Positives = 42/50 (84%)
 Frame = -3

Query: 209 DLFNLFGCMLEPATLPTQRYMAMLYTITTLILALQSIYYGHIYHHPKANK 60
           DLFN+ GC LEPATLPTQ YMA+LYTITTLIL  QSIYYGHIYH  K+ +
Sbjct: 80  DLFNVLGCFLEPATLPTQFYMAVLYTITTLILTAQSIYYGHIYHRLKSGR 129


>ref|XP_003566800.1| PREDICTED: uncharacterized protein LOC100836633 [Brachypodium
           distachyon]
          Length = 418

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/50 (76%), Positives = 42/50 (84%)
 Frame = -3

Query: 209 DLFNLFGCMLEPATLPTQRYMAMLYTITTLILALQSIYYGHIYHHPKANK 60
           DLFNL GC LEPATLPTQ YMA+LYTITT+IL  Q++YY HIYHH KA K
Sbjct: 81  DLFNLAGCFLEPATLPTQFYMALLYTITTVILTGQTLYYSHIYHHVKATK 130


>emb|CBI32879.3| unnamed protein product [Vitis vinifera]
          Length = 477

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/50 (76%), Positives = 42/50 (84%)
 Frame = -3

Query: 209 DLFNLFGCMLEPATLPTQRYMAMLYTITTLILALQSIYYGHIYHHPKANK 60
           DLFN+ GC LEPATLPTQ YMA+LYTITTLIL  QSIYYGHIYH  K+ +
Sbjct: 80  DLFNVLGCFLEPATLPTQFYMAVLYTITTLILTAQSIYYGHIYHRLKSGR 129


Top